Megalobrama amblycephala (Wuchang bream): 125267842
Help
Entry
125267842 CDS
T08212
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125267842
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
125267842
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
125267842
NCBI-ProteinID:
XP_048045812
LinkDB
All DBs
Position
LG4:50765970..50811789
Genome browser
AA seq
1979 aa
AA seq
DB search
MIMTTAANWVANGASLEDCHSNLFSLAELTGIKWRCYSCGGLGEFGPLISAPAQDDPILH
SFMQCVRANLLCVWRRKVKPDAKELWIFWWGEEPNLTDIIHHELQVVEEGLWECGLSYEC
RTLLFKAIHNLLERCLMDKDFVRIGKWFVKPHMVEEKPVSSSEHLSCCFSFFLHGLSSVC
CSVEVSQHQPLHRVTEDHMRLVRSGSRSLKVVLSPYGLCGTLTGRAFKMNDPAVHKIMED
WSHFYPVVLKHKGTDADLTFDPQGYAAFEVIVGGVRMVYPEALVLVAQSDAPVQGSVRDP
SSCGTPLTPPGSPGQSCSGDAGYQTTVCMSSQENVPNSSPKHSGRKLMNQMLHEACRECY
VDPLQRNSTRSDGVWGFSSPRERVSCSCYRVKQQQMNATTASIPPPSTQKHKAVEKPEKL
EKGPKRVSQMPFHHRVSADPRLSSGPELVLMPLDAPLSDCKYSKPPSATRKAPESLVHSP
VSPLPPTLSPHPRDHEAPVGLSDCLEGPSGLTRVEASESMRYRAPLGTKDTTREWWRSYK
IPTTDKMEFRPLDLCCNSEENLPENDGAALKRLFTQMQKRLKISEEHVRKDIPTQAGAED
PTDDPYDFKEGDTEYSFPATKKLKGLSRDPNRKSKAEEVNGNSVVPEGKDAMSIFSSSPH
SEESNPDESDDTVNPPLTREKDLIVLISHLENIFGEEDELASTFPNQQSSRTGAVTVEER
PLGVEGRAAAPYPSTVAELQRMFPTPPSLEQHAAFSPIMTYRDTPSHEPVGPSVGQDQSG
SSQSNNQLADFKMEVEEDMTCTKAEDLLIGCSMYAPLRSLPSQCLPALKIPEHCYYRPSW
ADMTKMEQYCLTSQNPFGISGALLEQDYTPMATGTAAGVLPSPATSRFSVPTPRTPRGGQ
GCVRQDGTELSSPASTPSTSVPLSSVELSVSGALLPEAHSLYVILLLSDSVLNIFKDRNF
DSCCICACNMNVKGADVGVYIPDSTCEDQYRCMCGFSAIVNRKLAHGAGLFLEDELDIFG
RGSEVGQAAERRLALCRRDPPGGRVQEQQTPSEVISLLQEQCSQPIMSLTSLNRSPGCSC
HGRQGALLQSWAMDRLWADSSDACVECYNALVQGLQYVDNAAGGKVEQATVRSSALHVWP
QTNVLDISKLSSQDVVRMLLSLQPFLQDAIQKKRTGRSWENIQHVQGPLTWQQFHKMAGR
GSYGSEESPEPLPIPSVLLGYDRDFLSLSPLALPFWEKFLLEPYGGQRDVAFLVLCPNSD
ALLSGTKAFFQDLSAVYEACRLGKHRPLALVSRDGIVPVGSVECEEETDDQWFSGLCAGQ
HQKENLNKLKLYTHTCRHTLVPQLSALTLDSSLLLPPKPPPASVPLAPPTSTQQPTAADG
DGHSGNTPNPTGGTTSQSISTEAGQGVTGDSNTTPSAESAESSAERERIGIPTEAESADS
HAHPPVIVLYLLDSFLCSGAGLGDEEGGDSMDAGSTWLLALLRCYTDMLSELPESIRPAL
VLQVLPCQYLLQPASGDSPVYLQQLRSLAFSTYSQSRRLLPTQTHIRSLTGFGPAATVQS
ALRSPESPGAVRLYSPPFILAPTRSKPSEAGDVCSDAPSRCNVLFVGYCLSHDQRWILVS
CTDQQGELLETCVINIDVPNRARRPKFSPRKIGLQKLWEWCVGIIQMTTLPWRIVIGRLG
RLGHGELKDWSVLLGEHSLHSIGRQLREACRMCGLSAADSPSILSACLVSMEPQGSFVVM
PDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSSTTQVAPSTYPTEDNPDDMF
GLPFPDELESDIGHDDMMLLTGTLHPSPSVSPVPSPGSPSTGSHFHHTRSQSERLLSRDA
PEELKQQPLALGYYVSTAPADGLPHWFWASCPQAQHQCPLFLKASLHHHISIAQTDDLVS
LRIHPLDSKTTSDVLRFVLEQYNALSWLTCDPAAQDRRSCLPVHFTVLTQMYNGILKLL
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgattatgactacagcagcgaactgggtggcgaacggggcgagtttagaagactgtcat
tccaacctcttctctctggcagagctgacgggcattaaatggcggtgctacagttgtggt
ggtctgggcgaatttggaccactgatatccgctccggcgcaggatgaccccattctgcac
agcttcatgcagtgcgttcgtgcaaacctgctgtgtgtgtggcggcgcaaagtcaaacct
gatgccaaagagctctggatcttctggtggggtgaagaaccaaatctgacggatattatc
caccatgagctgcaagtggtggaggagggattgtgggaatgtggcctgtcgtatgagtgt
cggacgctgcttttcaaggccattcacaatctgctggagagatgtttgatggataaagat
tttgttcgcattgggaagtggtttgtcaagccgcacatggtggaggagaagcccgtcagc
agcagtgagcacctgtcgtgctgcttctcgttcttcctgcatggcttgagcagcgtgtgt
tgcagcgtggaggtgtcgcagcatcagccgctgcaccgcgtcacggaggatcacatgcgt
ctggtccggagcggcagccgctcgctgaaggtggtgttgagtccgtacggcctttgcggg
acactgacgggtcgtgcctttaagatgaacgaccctgcggtgcataaaatcatggaggac
tggagtcatttctaccccgtggtgctgaaacacaaagggacggatgccgacctgaccttt
gaccctcagggttacgctgcattcgaggtcattgtaggaggagtacggatggtttaccca
gaagccttagtgctcgtggctcagagtgacgcacctgtgcagggttcagtcagagacccg
tccagctgcgggacgcccctcacaccccccggctcaccgggacagtcctgctcaggagat
gctggctatcagacgaccgtctgtatgtctagccaagagaatgtcccaaactccagccca
aagcattctgggaggaagctcatgaatcagatgctccatgaggcctgtagggaatgttat
gtcgatccacttcagcgcaacagcactcggtccgacggcgtctggggcttttccagcccg
agagagagagtttcctgcagctgctacagggtgaagcagcagcagatgaacgccacaacc
gcctccatccctccaccctccacccaaaaacacaaagcagtcgaaaagccagagaaactc
gagaagggccccaaacgtgtgtctcagatgcctttccaccaccgtgtttctgcggatccg
cggctctcctccgggcctgagctcgtcctgatgcctctggatgctcccttatcagactgc
aaatactccaaaccgccgtctgccactagaaaagccccagagtcactcgttcattctccc
gtatcgccactgccgcccacactgagcccccatccacgggaccacgaggcccctgtgggc
ctctccgactgtctggaggggccgtcaggactcacgcgtgtggaggcgagtgagagcatg
cggtacagggcgcctctgggcacaaaggacaccaccagggaatggtggcgaagctacaag
attcccacaacagacaagatggaatttagacctctggatctttgctgcaactcagaggag
aatctgccggagaatgacggagccgctctcaagaggctgttcactcagatgcagaagaga
ttgaagatctcagaggagcacgtgaggaaggacataccgacacaggctggagcggaagat
cccactgatgatccgtatgactttaaagagggagacactgagtacagcttccctgccacc
aaaaagctgaaaggactgagccgagaccccaaccgcaaatctaaggccgaggaagtgaat
gggaacagcgtggttcctgaggggaaagatgccatgtccatctttagttcatccccacat
tcagaagagtcaaatccagatgaatcagatgacacagtgaatcctcccttgaccagagag
aaagatctcattgtgctcatctctcacctggagaacatctttggagaggaggatgaacta
gcgagcacatttccgaaccagcagtcatccaggactggggctgtcacagtggaggagcgc
ccactaggagtcgaggggagagctgcagcaccgtacccctcaacagtagcagagctccag
cgcatgttccccacacctccgtctctagagcagcacgcggccttctctcccatcatgacg
taccgcgacacacccagccacgagccggtcggcccctcagtgggtcaggatcagtccggc
agctctcagtccaacaaccagctcgccgacttcaagatggaagtggaggaagacatgacc
tgcaccaaagccgaggatctgctgattggttgctccatgtatgccccactgcgttcctta
cccagccagtgtttgcctgctcttaaaatcccagagcactgctactacagaccgtcctgg
gctgatatgaccaagatggagcagtactgcctgacctctcaaaatcctttcggcatcagt
ggtgctcttctggagcaggactacactcccatggccactggcacagccgcaggtgtcctg
ccttccccggccacctctcgcttctctgtgccgacccctcgtaccccccgcggcggccag
ggctgcgtcagacaggatggcactgagctcagctcaccagcgtcaaccccctccaccagc
gttccgctcagctcggtcgagctgtctgtatcgggagcactgctgcccgaggcgcacagt
ctctacgttatactgctgctgtccgactcagtactgaatattttcaaagaccgcaacttt
gacagctgctgcatatgtgcctgtaacatgaatgttaaaggggcggatgttggtgtctat
atcccagactccacctgtgaggaccagtatcgatgcatgtgcggcttcagtgcgatcgta
aaccgaaagctggcgcacggggcgggcctctttctggaggatgagctggacatatttggc
cgtggctctgaggtgggccaagcggcagagaggagactggcactgtgcaggcgagaccct
cctggcggaagagttcaggaacaacagacgccctccgaagtaatttctctgctacaggag
cagtgctctcagccaatcatgtccctgacatccctgaacagatcacccggctgttcctgc
cacggccgccagggggcgctgttgcagagctgggcaatggacaggctgtgggcggacagc
agtgatgcatgtgtggagtgttataacgcgctggtgcagggactgcagtatgtggacaat
gcagctggagggaaggtggaacaagctacagtgaggagtagtgcactacacgtctggcca
cagaccaacgtgttggacatcagcaaactgtcatctcaagatgtggtgcggatgctgctg
tctctccagccattcctgcaggatgcgatccagaagaagaggacgggccggagctgggag
aacatccagcatgttcagggtcctctcacatggcagcaattccacaaaatggctggacga
ggttcatatggttccgaggaatccccagagccgctgccgatccccagtgtgctactggga
tatgatagagattttctttctctgtctccacttgctcttcccttctgggagaagtttctc
ctcgagccgtacggaggtcagagggatgtggccttcctagtactgtgtcccaatagtgac
gccctgctcagtggcaccaaagctttcttccaagatctcagcgctgtctatgaggcgtgt
cggctggggaagcaccgtccgctggcgctggtgtccagagacgggattgtcccagtggga
tcagtggagtgtgaggaggagacagatgatcagtggttctcagggctctgcgctggacaa
catcagaaggaaaatctcaacaaactcaaactctacacacacacctgcagacacacactt
gtgccgcagctctctgccctgacgctggacagcagcctcctccttcccccaaagcctcca
cctgcttctgttcctctcgccccgccaacatccacccaacagcctactgccgctgatgga
gacggacactcaggaaacacccctaaccctacgggtggtaccacatcccagtccatcagc
acagaagcaggacaaggagttacgggcgactcaaacaccacaccatcagcagagagcgct
gaaagctcagcagagagggaacggattggcattccaacagaggcggagtcagcagacagc
cacgcccacccacccgtgattgtgctttatctgttggattccttcctatgttcgggggcg
gggttaggggacgaagagggcggggacagcatggatgcgggcagcacatggcttttagca
ctgctgcgctgctacacggacatgctgagcgagctgccagagagcattcggccagcgctg
gtgctgcaggtgttgccgtgtcagtatctgttgcagccagccagcggagacagtcctgtg
tacctgcagcagctgcgatcgctggccttctccacgtactcacaaagccgccgcctgtta
cccacacagacgcacatcaggtccctcactggattcggccccgcggccacagtacagtca
gcgcttaggagcccagagagtcccggtgccgtgcgtctgtattccccccctttcatcctg
gctccgacgcgcagcaaaccgtctgaggcgggtgacgtatgttcggatgctccttcacgc
tgtaatgtgttgtttgtgggatactgtctgtcacatgaccagcgctggatcctggtgtcc
tgcacagaccagcagggggagctgctggagacctgcgtcatcaacatcgatgtgcccaac
agagctcggcggccaaagttctctcctcggaaaattggcctccaaaagttatgggaatgg
tgcgtaggcattattcagatgaccacactgccgtggaggatcgtgattggtcgtttagga
agactgggccacggggaactgaaagactggagtgtgctgctgggcgagcattcgctgcat
tcgattggccgtcagctgcgggaggcatgtcgtatgtgtggtttgtccgctgctgattcg
ccctccattctcagtgcctgcctggtttccatggagccgcagggatcttttgtggtgatg
ccagacgcagtgacgatgggctcagtattcggccgcagcaccgctctaaacctgcagacg
tctcagctcaacactcctcaggatgcgtcctgtacacacatcctggtgtttcccacctca
tccaccacacaggtggcgccgagcacctacccgactgaagacaaccctgatgacatgttc
ggtttgcccttccccgatgagctggagagtgacatcggccacgatgacatgatgctgctc
acaggaacgctgcacccgtcacccagcgtgtcccccgtcccgtccccagggtcccccagc
accggctctcacttccatcacacacggagtcagagtgagcgtctgctgtcccgggacgct
ccagaggagctgaaacagcagccgctggctctgggatactacgtgtccacggctccggct
gacgggctgccgcactggttctgggcctcctgcccgcaagcgcagcatcagtgtccgctc
ttccttaaggcgtctctgcatcatcacatctccatcgctcagacagatgatctggtgtct
ctgcggattcacccgctggactccaaaaccacctcagacgtgctcaggtttgttctggag
cagtataacgctctgtcctggctcacctgtgatcccgccgcacaagaccggcgttcctgc
cttcccgttcatttcaccgtcctcacgcagatgtacaacggcatcctgaaactcctgtag
DBGET
integrated database retrieval system
