Megalobrama amblycephala (Wuchang bream): 125267919
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Entry
125267919 CDS
T08212
Symbol
tia1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125267919 (tia1)
03041 Spliceosome [BR:
mamb03041
]
125267919 (tia1)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125267919 (tia1)
Spliceosome [BR:
mamb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125267919 (tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125267919
NCBI-ProteinID:
XP_048045945
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All DBs
Position
LG4:complement(53426147..53436873)
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AA seq
386 aa
AA seq
DB search
MMDDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHA
AASLAAMNGRKIMGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSLEGHLVKCYWGKETTDMVSPMQQVQVPQQNKVGFAAQ
PYGQWGQWYGNAQQISQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWPGVSAVSNGGV
VEPAQGVNGTVLANQSSMGTAGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgagcagcccaagaccctgtatgttggaaacctgtctcgggatgtgaca
gaggcccttattatgcagctctttggtcagattggcccttgtaagagctgtaaaatgatt
gtggatacggcaggtaacgatccatactgctttgtggagttcttcgagcataggcacgca
gcggcctcacttgcagccatgaatgggcgtaaaataatgggtaaggaggtaaaggtcaac
tgggctacatcaccaagcagccagaaaaaagacacaagcaatcacttccacgtctttgtt
ggagacctcagtccagaaattaccactgatgatatcagagctgcctttgcaccctttgga
aggatatcagatgcacgtgtagtgaaagacatggcgacggggaagtcaaaaggctatggt
tttgtttcgttcttcaacaaatgggatgcagagaatgccattcagcagatgggaggtcag
tggttgggcggcaggcagatcaggactaattgggctacaagaaaacccccagcgcctaaa
gccacctatgaaacaaacaccaagcacttgtcgtttgacgaagtagtgaaccagtccagc
cccagcaactgcactgtctattgtggtggagtcactacaggccttacagaacaactcatg
agacagaccttttccccttttggccaaataatggaaattcgagtgttcccagacaaaggc
tactcgtttgtgaggttcaactctcatgaaagcgcagctcacgcgatagtgtctgttaat
ggcacgtccctagaaggtcacctagtgaaatgttactggggtaaagagactacggacatg
gtgagccccatgcagcaggtgcaggtaccccagcagaacaaagttggtttcgcggcacag
ccatacggccagtggggacagtggtacggtaacgcacaacaaattagtcagtatgtccct
aacggctggcaggtacctacttatggcgtgtacggacaggcctggaaccaacagggcttc
aatcacttacaggctggcgctgggtggcctggcgtgagtgccgtgagtaacggaggcgta
gtggagcctgcgcagggagtcaatggaaccgtgctagccaaccagtccagcatgggcact
gcgggataccacacacactga
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