Megalobrama amblycephala (Wuchang bream): 125267988
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Entry
125267988 CDS
T08212
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125267988 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125267988 (taf6)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125267988 (taf6)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125267988 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
125267988 (taf6)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125267988 (taf6)
STAGA complex
125267988 (taf6)
TFTC complex
125267988 (taf6)
SAGA complex
125267988 (taf6)
SLIK complex
125267988 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
Motif
Other DBs
NCBI-GeneID:
125267988
NCBI-ProteinID:
XP_048046073
LinkDB
All DBs
Position
LG4:55730124..55796617
Genome browser
AA seq
636 aa
AA seq
DB search
MAEERRQKLCSVILPTESMKAMAESVGVGSLQEDSCLALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTGDIDHALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPAIPENPPPAPKEQQKAESTEPLKAVKPGQEEEGSIQS
KSQGATSAEVKGKEKMRMKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAVVT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKALLDDRTQW
TTRYGCIAGLAELGHDVIKTLIIPRLSVEGARIKAVMDGPVVSNIDKIGADHVQSLLLKH
CASVVAKTRPLPDLVDQYKTDYGYLGTMLCSHVIKARAQASFQAQTVNRTTLTITQPRPT
LSMSQSGLSTSGGSRTPSIIKVPSSLTLMSTRPGTPTQPSPPATKYIVMATSAGAASTQQ
VITLSSSQSGSPVTSTVPSTPTSLQPLVKLESGNTGAVGGSRPLQKYIVVSLPSSSSSLE
NKGSGVLPSSTSPISMESTVKLERSESPATSTQSPH
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaacgcagacagaagctgtgttcagtgatcctccctactgaatccatgaag
gcgatggcggagtcagtgggtgtgggctcactgcaggaagacagttgtctggccctcagc
gaagaggttagctacaggattaaagagattgcacaggatgcgctaaagtttatgcaccat
gggaaaagacgcaaacttacgactggtgacattgaccatgctcttaaactaaaaaacgtg
gagccactgtatggattccagtctcaagagttcatcccgtttcgctttgcaagtggaggc
ggcagagaattgcacttttatgaagaaaaggaagtggatcttagtgacatcatcaacacg
cccctccctcgagttcctcttgatgtttcactcaaagctcactggttaagcattgatggt
gtccagcctgcaataccagagaacccacctccagcccctaaagagcagcagaaggcagag
tctacagagccgctcaaagctgtcaaacctggacaggaagaggaaggctctatccagtct
aagagtcagggtgcaacctctgctgaagtcaaaggaaaggagaagatgcggatgaagcca
cgtagcacacacgagctctctgtggaacagcaactgtactataaagagatcactgaagct
tgtgtgggatcttgtgaagccaaaagagcggaggcgctgcagagcatagcaacagaccca
gggctgtaccagatgctgccaaggtttagtaccttcatctctgagggcgtgcgtgtaaat
gtggttcagaataacctggctttgctgatatacttgatgaggatggtgaaggctttaatg
gacaatcccacactatatttagagaaatatctccatgagttgatcccggcagtggtgacg
tgtattgtcagtaagcagttatgtttaaggcctgacgtggacaatcactgggctttgcga
gactttgctgctcggctgatggctcagagctgcaagacattcagcacaactaccaacaac
atccagtcacgtatcacaaagacctttactaaggcattgttggatgataggactcagtgg
acaacacgttatggctgcattgccggacttgctgaactcgggcatgacgtgataaagaca
ttgatcatccctcgcctgtctgtagagggtgctcgtattaaagctgtgatggatgggcca
gtggtatccaacattgataagattggagctgatcatgtccagagtcttttacttaaacat
tgtgcaagtgtggttgctaaaactaggccgctaccagatttggtggatcaatacaagaca
gattatggttatctgggcaccatgctctgttcacatgtgatcaaagctcgtgcacaggct
tccttccaggcccaaactgttaacagaaccacactcactatcacacagccacggccaact
ctgtcaatgtctcagagtggattgtcaacgtcaggtggttcacgcacacccagcatcatt
aaagtacccagttcgctcaccctcatgtccactcgccctggaacgcccactcagccgtca
cccccagcaaccaagtatattgttatggcaacaagtgcaggggctgcatccacacagcag
gtaatcactctcagctcctcccagtctggatctcctgtcacaagtacagtccccagcacc
cccacgtctttacaaccactcgttaaactggagtctggaaacacaggtgctgtgggtggc
tcacgccctctccagaaatacattgtggtgtctttgccttcatcctcttcctcactggag
aacaagggctcaggtgtccttccctcctctacctcacccatcagcatggagtctactgtc
aagctagaacgttcggaatcacctgccacaagcacacaatccccacactga
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