Megalobrama amblycephala (Wuchang bream): 125268220
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Entry
125268220 CDS
T08212
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1 isoform X1
KO
K09335
visual system homeobox protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125268220 (vsx1)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
125268220 (vsx1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
125268220
NCBI-ProteinID:
XP_048046251
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All DBs
Position
LG5:22820796..22823971
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AA seq
344 aa
AA seq
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MTGREETIDEKPKVKLYPSFGIDKSRLNGSGFRSKGFAITDLLGLESELQPHQSGPGAGA
NGEGQSAAVGGFAFPGGSLPLGLGFLCSLAAQQPPGTPCFLPSHIPLLQSRTESHFMQNM
EQQRDAYSDDDCLSGDHNDGKNSGNSQKRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYA
REMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESII
NSAKNGMMGSCAPWLLGEPAGMHKKSLEIAKKAPGTPESIHSDSYSEEHKGKDSDMTWSS
GANGADDSEDMAIDLSSTSKQESKSTLKRSPPRTEDSSDSENES
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaagagaagagactatagatgaaaaacctaaggttaaactgtatccctcattc
ggaatcgacaaatcacgcctcaatggatctggattcaggtccaaaggtttcgcaatcaca
gacctgctcggtctggagtcggaacttcagccgcatcagtccggtcctggcgcaggggcc
aatggagaggggcagagcgcggcggtaggaggatttgccttcccgggtggctctttgccg
ctcggcttgggttttctctgtagtttggcagcacaacaacctcccggaaccccgtgtttt
cttccgagccacatcccgctcctgcagtcacggacagagagccacttcatgcagaatatg
gaacagcaacgggacgcctattccgatgatgattgtctttccggggatcacaatgatgga
aaaaactcagggaactctcaaaagaggaagaagcgtaggcacaggacagttttcacctcg
catcagcttgaggagctggagaaagccttccatgaagcgcactatccagatgtttatgca
agagaaatgctggccatgaaaacagagctaccagaggacaggatacaggtatggtttcaa
aaccgccgtgctaagtggaggaaaagggagaagtgctggggccgcagcagtgtcatggca
gaatatgggctgtatggtgccatggtccgtcactcgattccacttccagaatccattatc
aactcggccaagaatggaatgatgggctcatgcgctccctggcttctaggtgagccagca
ggaatgcacaaaaagtctctggaaatagcgaagaaagctcccggcacacctgaatcgatt
cactcagattcatattcagaggaacacaaggggaaagacagcgacatgacatggtcaagt
ggagccaatggagcagatgactctgaggacatggcaatagacttgtccagcacttcgaaa
caagagagtaaaagcactttgaaaagatcaccacctcgaacagaagacagcagtgattct
gaaaatgagagttaa
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integrated database retrieval system
