Megalobrama amblycephala (Wuchang bream): 125268486
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Entry
125268486 CDS
T08212
Symbol
si:ch211-266g18.9
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125268486 (si:ch211-266g18.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125268486 (si:ch211-266g18.9)
Membrane trafficking [BR:
mamb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125268486 (si:ch211-266g18.9)
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
BsuBI_PstI_RE_N
Se_S_carrier
SbsC_spectrin-like
Motif
Other DBs
NCBI-GeneID:
125268486
NCBI-ProteinID:
XP_048046669
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Position
LG5:complement(12251870..12264196)
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AA seq
837 aa
AA seq
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MKVFTPVLVCQKMPSGKGRDKSSIQCLECFGKNLYIGTKEGVVEHLTVNSVSGEESLSVR
EVGKRQMGRSGAISQLTAVPVLNHLLVLWDGSVTVLNMFSLEPIPALKKIQNVSLFCVCE
SAVQTDSVELIAASTKRKIVSIYKVCVDRWECVRQVALPQEPVVLAAHGACLCVATCDRY
FLHDYHSQTTLDLFPHNLAKQNIIANKYGKGGFILNGPGSLGMFVMKNGTSQHPPVQWPD
GVVDAAVHFPYVLVLQNQTVHIYSILDQQLKQTVPVQSAKSVISTEESVFVVADKEIHRL
SPVPLEDQIEELVKRQRVDEALTLLDRVQDLLPKDSYKDLHKNVICTSGMIKFYREDFVE
AKELFIKGELDPREIISLYPAMPVVSEDFTPQTTAVSNAKDLWTLSRDDWPTFQQYLSFL
DDFLREVRPTGQGQMCPQDIDSALFKLYLEQGEYGKLGQLVSSQNNCNLQMCVPDLEQHK
RFFTLGLLYQSQGQHVNAIQTWVKIVEDESEDPSDISVVQHIVNTLSNLKHKPIVLKFAD
WVLQRDQEAGILIFTKMHASSNIIFAPEEVLTILTNYSVAMILYLEFLVNELHSKEEKHH
TTLIKSYIKWILQSIEGDYSNETSREEMRHKLQKLLWQSSFYNADTIYDQITSSFLHVEK
AILLGKSGKHKKALQVLVYEEKDQQAAESYCWRTSAGRDRKFTQGIFLTLLQIYLESTHH
VIAAVDLLNKNAASFDLVSVLRVLPGSWSMKLVLRFLSESLRGTVHDKRMRGLEMSLAKV
ETLRHKHAWVEATHEKIRVDRGCVCYSCQKRLTGPEFLRRPTGELTHISCHGGESSQ
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctttactcctgtgctagtctgtcaaaaaatgccctcagggaaaggcagagac
aaatccagcattcaatgtttggagtgttttggtaaaaacctctatattgggaccaaagag
ggagtcgtcgagcacctcactgtaaatagcgtgagcggtgaagaaagcctttcagtgcgg
gaggtggggaagagacagatgggccgaagcggagcaatcagccagctgacagcggtccct
gttctgaaccacctcttagttctctgggatggttcggtcactgtgctcaacatgttctcc
ctggaacctattcctgccctgaagaaaatccagaatgtgtcactcttctgtgtctgtgag
tcagcggttcagactgattccgtggagctcattgcagcttcgaccaagaggaaaatagtg
agcatttataaggtgtgtgtggacagatgggagtgtgtaaggcaggtggctctgccgcag
gagcctgtggttctggctgcgcatggggcgtgtctgtgtgtggccacttgtgacagatat
tttctccatgattatcatagccaaaccaccctagatcttttcccacataacctggcaaaa
caaaatatcattgccaacaaatatggaaaaggaggattcattttaaatgggcctggaagt
ttgggcatgtttgtgatgaagaatggtacttcccagcatcctcctgtacagtggcctgat
ggagtggtggacgctgcagtgcatttcccatatgtgcttgttctacaaaatcagactgtt
catatctacagcattctggaccaacagctgaagcaaactgtccctgtacaaagtgccaaa
tctgtcatctcaacagaagaaagtgttttcgttgttgctgacaaagagattcatcggctg
tcaccagttccgctggaggatcagattgaagagctggttaagagacagagagttgatgaa
gccctgacgctgctggacagggttcaagatctcttgccaaaggattcctataaggatcta
cataaaaatgtcatctgcacatctggaatgattaagttctacagagaggattttgtggaa
gcaaaagagctttttattaaaggtgaactagacccaagggaaatcattagcctttatcca
gctatgcctgttgtgagtgaagactttacacctcagacaacagcagtcagcaatgccaag
gacctgtggacgttaagtcgagacgactggccgacatttcagcaatacctaagctttttg
gatgacttcctgagagaagtcaggccaacaggacagggccaaatgtgtccgcaggacatt
gactctgcactttttaagctgtatttggaacaaggagaatatggaaaactgggccagctt
gtgtcatcgcagaataactgtaacctccaaatgtgtgtgcctgacttggagcagcacaaa
aggtttttcacacttggattgctctatcaaagccaaggccagcatgtcaatgcaattcag
acctgggttaaaattgtggaggatgagagcgaagacccctcagacatcagtgtagtccag
catatagttaatactctttcaaatctgaagcacaaacccatcgtcttgaaatttgcagat
tgggttcttcagagagaccaagaggctggaatactgatctttacaaagatgcatgcaagc
agcaacataatatttgcaccagaagaagtccttaccattctcaccaactactcagttgcc
atgattctttacttggaatttttagtcaatgaattacacagcaaggaggaaaagcatcat
accacactcatcaaatcatacatcaaatggatactgcagtcaatcgaaggtgactacagc
aatgaaacaagcagggaagagatgagacataaactacagaagttactctggcagtcttct
ttctacaatgctgataccatatacgaccaaataacatcctcgtttcttcatgtggagaaa
gcaattttgcttgggaaatctggtaaacacaaaaaggccctgcaggttttggtctatgaa
gaaaaagaccagcaggctgccgaaagctactgttggaggacctctgctggacgagacagg
aagttcacccagggaatattcctcaccctgcttcaaatctacctcgagtccactcatcat
gtgatcgcagcagtggatctgctgaacaaaaatgcagcgtcttttgatttagtcagtgtg
ttgagggtgctgccgggctcctggtctatgaaacttgtgttgcggttcctttctgaatca
ctgagaggaacggtgcatgacaaaagaatgagaggtctggagatgagcctagccaaggtg
gaaactctaagacacaagcatgcctgggtggaagcgactcacgaaaaaatcagagtcgac
agaggatgtgtttgctattcctgccagaaacgtcttacagggcctgagttcctgcgcagg
ccgacaggagagctgacacacatatcctgtcatggtggtgaaagcagtcaatga
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