Megalobrama amblycephala (Wuchang bream): 125268568
Help
Entry
125268568 CDS
T08212
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03013
Nucleocytoplasmic transport
mamb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125268568 (pnn)
03015 mRNA surveillance pathway
125268568 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125268568 (pnn)
03041 Spliceosome [BR:
mamb03041
]
125268568 (pnn)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125268568 (pnn)
Spliceosome [BR:
mamb03041
]
Complex C
Other components
EJC/TREX
125268568 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
125268568
NCBI-ProteinID:
XP_048046804
LinkDB
All DBs
Position
LG5:complement(16586982..16594169)
Genome browser
AA seq
664 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQNRRLSITGPGGGRGRGINL
LRRGLSDSGVGPPAKQRDIEGALLRLAGDQRARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESTVSTERLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNTKLIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKLNGVFDERREAFAEQLNKMEARPRRQSQRTGDREMED
SRRAEETKKEDQEEGKAGVGRTGNRHDVEIEDEEEDVVEEEGEESSEIREREGEQEQAEE
NDKHEESERKAEEDEEEDEEEDVGAVKEDEEEQMEITEVVREAEVESKLQVESPEAIVEE
VGNVKREEEQETENETQQDVVMDSQQTPESQMETQPEECKEPQLDVPTPGVTEHDTKQDD
AAPETQQPQLEPDPEVPSQELSQEPSVQPQGAKADTKEAGKEANDDARGRAKVREKRSKS
RSSSSSSSSSSSSSSSSGSSSSSSGSSSTSSGSSSSSSSSRSRSHGRDRDGRDHKRRRRP
SDRERRKSGSERGHKSSKGSGRESKGSKDKNSKPDRKRSPEGSRSGRRSSRSERDRKSDR
KERR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgcgaagtttgcaagaccagctcgaaaaagccaaggaaagcttaaag
agcgtagacgaaaatattcggaaactaaccggcagagatccgagtgaattaagaccgggt
caaaataggagactgtccatcacaggcccaggtggaggtagggggcgtggaatcaatttg
ctgaggcgtggactctcagatagcggtgtaggacccccagccaaacagagggacatcgaa
ggggcactcttgaggctggcaggggatcagcgagccaggagagattcacgccatgacagc
gacgctgaggatgatgacgatgtcaaaaaaccagcgttgcagtcatctgtggttgctacc
tccaaagaacgtacgcgccgagatcttattcaagatcagaccatggacgagagaggaaag
cagagaaaccggcgcatgtttggcctactgatgggaacattgcagaagtttaaacaggag
tctactgtgtccacagagcggttaaaaagacggcaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagtgaaaggagagagctctttgaagagaga
cgtgccaaacaaaccgagctgcgacttctggagcacaaagtggagctcgctcaactgcaa
gaagagtggaatgcacataatactaagctcatcaagttcattcgcacgaagaccaagccc
ccgatcttctacctgcctgggcgaatgtgctccgctactcaaaagctcctggaggagtct
cagaaaaaattaaatggtgtttttgatgaaagacgcgaagcctttgctgagcaactcaac
aaaatggaggctcggccaaggcgtcagtcccagaggacaggtgacagagaaatggaggat
agccgtcgggctgaagagacgaagaaagaagatcaagaggagggtaaggctggagtaggg
cggacaggtaataggcatgatgtggagattgaggatgaggaggaagatgtagtggaggag
gaaggagaggagagctcagagattagggagagggagggggagcaggagcaggccgaggag
aacgataaacatgaggagagtgagaggaaggcagaggaagatgaggaggaggacgaggag
gaggatgtaggagcagttaaggaagatgaggaagagcagatggagatcacagaagttgtg
agggaagctgaggtggagagtaagttgcaggttgagagtccagaagccatagttgaggag
gtaggtaatgtgaaaagggaggaagagcaggagaccgagaatgagactcagcaggacgtc
gtaatggactctcagcaaacacccgaaagccagatggaaacgcagcctgaggagtgcaaa
gagcctcaactggacgtcccaacccctggtgtgacagaacatgacaccaaacaagatgac
gctgcgcctgagacccaacagccacagcttgaacctgacccagaagtcccctctcaagag
ctgagccaagaaccgtcagtccaaccacaaggagccaaagcggacacaaaggaagctggc
aaggaggccaatgatgatgctcgcggacgtgccaaagtccgggaaaagaggagcaagagc
cgaagtagcagcagctcctcttccagttcctcttcaagctcctcctccagtggatccagc
tcctcttctagtggctccagcagcacttcctctggttcctcctcgtcgtcttccagttca
cgctcccgcagccatggcagggatagagacggccgagaccacaaacgccgcaggaggccg
tcggacagggagcgtaggaagagcggcagcgagaggggacacaagtcctccaaaggcagt
ggacgggaaagcaaggggtccaaagacaagaactccaaaccagacagaaagaggagtcca
gaaggaagcaggtctgggagaaggtcctccagaagcgagagagatcgtaagtctgatcga
aaggaacgacgttga
DBGET
integrated database retrieval system
