Megalobrama amblycephala (Wuchang bream): 125268636
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Entry
125268636 CDS
T08212
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125268636
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125268636
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
125268636
NCBI-ProteinID:
XP_048046935
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All DBs
Position
LG5:complement(18413033..18772547)
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AA seq
976 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAAGAGAGGGMPAASRVPGATNGNPQNVQGLTSYQQSEPYWERSA
NASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGSQRRRSPSAVA
SEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
HVEMAEQLGMKLPPGRGLLSQGGGAEDGASSASSSSHSETPEPVESSSPSLLSPDNSLER
SFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQIMGMVVVAHALPPP
TINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRQS
HLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDT
PMDIAQLPNLPEKASESSETSDSESDSKENSEDNENSKSDGKGNQSSENSEDPESDSKKQ
TGRPPEQEMRRQEEGDSSSNPESQDSDDSLEPSDCETDHKEGRLGGLHIKVEHYGDGEVE
ELQDSPSSCSSEEEDDAEDIVKDCNSGRELSGPAMSKHQKRKKRRKKQKWDGSRQRLRLS
PSAAATPSPGSLDPTLGDQPPLLLPPSPTSSSVLKIKTEMSEPINFDNDSSIWNYPPNRE
ISRNESPYSMTKPHDTFPSPPPAGLQVSIPDSVLTPPGAEGGGGSRKPNFSGNSSSGNNN
SAPTSVSSATPGSLVPPSSSTTADPLSPPLSASPRDKQQGTPTSSGSLLYTSDLEALQRL
QAGNVVLPLVHRVTGTLAATSTASPRVYTTGTIRYAPADVSLAMQGNLLPNAHTAVNFVD
GPGFGIDPKTPMEMLYHHVHRLNMSTPFGAAVSGAGLTQMPAANVFTTAEGLFSTLPFPV
YSNGIHNTQTLERKED
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcggcggcggctgcaggtgcg
ggagccggtggagggatgccggctgcgtccagagtcccgggagctaccaacgggaatccg
caaaacgtccaaggcttgacgtcttaccaacaaagcgagccatactgggagaggtctgct
aatgcaagctcctgctccgccactaggcccaagacactccaccttggagggcaacaacat
acctcatcaccatggttgcaggctctaaggaaggagaagtcacgtgacgccgctcgctcg
cgccgggggaaggaaaacttcgagttttacgagctggcaaagatgcttccgctccccggc
gccatcaccagccagctggataaggcctccatcatccgcctcaccatcagctaccttaag
atgagggacttcgccaaccagggagacccgccatggaacctgcgcatcgaaggaccgccg
cccaacacctcagtcaaagctatcgggtcccagcggaggcggagccccagtgctgttgcc
tcggagatctttgagcctcaccttggcagccacattctgcagtccctagatggatttgta
tttgcactaaacaaggaggggaggtttttgtacatctcagagacggtgtccatatacctg
gggctttcacaggtagaactgacgggcagcagcgtgtttgactacgttcacccgggcgat
catgtggagatggctgagcagctgggcatgaagcttccgccggggagagggctgctgtct
cagggcggaggggccgaggacggggccagctcagcctcttcttcctctcactccgagaca
cctgagccagtggagtcgagcagccctagtcttctgtcgccggataactctctagaacgt
tccttctttgtccgtatgaagtccacactcaccaagagaggcgtccacatcaagtcctct
ggatacaaggttatccacgttaccggcaggctgcggataagaatggcattaacgcacagt
cgttcggtacccaatcaaatcatgggcatggtcgtggtggcacacgcacttcctccgccg
accatcaacgaggttcggatcgactgccagatgtttgttacacgggtcaatatggatctc
aacattgtctactgtgaaaacagaatcagcgactacatggacctgacacctgtcgacatc
gtagggaagagatgttatcacttcattcatgcagaggacgtggaaggcattcggcaaagc
catttagacttgatgaataaaggtcaatgtgtgacaaagtattaccgctggattcagaag
aatggaggttatatctggattcagtccagtgccactattgcaatcaacgccaagaacgcc
aatgaaaaaaacatcatctgggtcaactatgtactgagtaatcctgagtacaaagacaca
cctatggatatcgcacagctgcctaacctgccagagaaagcatcagagtcctcggaaaca
tctgattctgaatccgactccaaggagaactctgaagacaacgaaaactccaagtcagat
gggaaggggaatcagtcttccgagaacagtgaagatccagagtcggacagtaagaaacag
acgggccggccgccagagcaagaaatgagacgacaggaggaaggagacagttccagcaat
ccagaaagtcaggacagtgatgatagtctggaaccttctgactgtgaaactgaccacaag
gagggccgcctgggtggtctacacataaaggtagagcattatggcgacggcgaggtggag
gaattgcaggactcgccctcctcttgctcctcagaagaagaggatgatgcagaagatatt
gtgaaggactgcaacagtggacgagagctgagtgggccggcaatgagtaaacaccagaag
agaaagaagaggaggaaaaagcagaaatgggatggtagccggcaacgtctccgtctgtct
ccctcggctgctgccacccccagccctggcagcctggaccccaccctcggagaccagcct
ccccttctgcttccaccctccccgaccagttcctctgtgctgaagatcaagactgagatg
tcggaacctataaacttcgacaacgacagcagcatctggaactatccacccaatcgagag
atctcccgtaacgagtctccctacagcatgacaaaaccccatgacaccttcccttcccct
ccgcctgccggcctgcaggtgtccatccccgactccgtccttactccacctggggccgag
ggtggaggaggcagcagaaagcccaacttcagtggcaacagtagcagtggcaacaataac
agcgcccccacttccgtctccagcgcaactccaggcagcttggttcctccttccagttcc
accaccgctgacccgctctccccacctctgtctgcctcgccgcgggacaagcagcagggt
acgcccacctcctccggttctctgctctacaccagtgatctggaagccctgcagaggtta
caagcggggaacgtggtgcttccactggtgcacagagtcacaggcacgcttgccgccacc
agcacggcttccccgcgagtctacaccactggaacaatccgatacgccccggcagatgtc
agcctggccatgcagggaaacctcctgcctaatgcccacactgctgtgaactttgtggat
gggcctggctttggcatagaccccaagacacccatggagatgctttaccatcacgttcac
cggctcaacatgtccaccccctttggggccgcagtcagcggagctggactcacgcagatg
cctgctgctaacgtcttcaccacagcagagggactcttttccacgcttccgtttcccgtc
tacagcaacggcatccacaacacacagactctggagcgcaaggaggattga
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