Megalobrama amblycephala (Wuchang bream): 125268711
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Entry
125268711 CDS
T08212
Symbol
thumpd2
Name
(RefSeq) THUMP domain-containing protein 2
KO
K28400
U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 [EC:2.1.1.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125268711 (thumpd2)
Spliceosome [BR:
mamb03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
125268711 (thumpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltransf_31
Methyltransf_25
Methyltransf_11
Ubie_methyltran
THUMP
MTS
Cons_hypoth95
Methyltransf_4
RlmL_1st
Methyltransf_15
Methyltransf_12
Methyltransf_8
NpmA
PrmA
N6_Mtase
Methyltransf_24
Motif
Other DBs
NCBI-GeneID:
125268711
NCBI-ProteinID:
XP_048047069
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All DBs
Position
LG5:complement(20182619..20188196)
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AA seq
447 aa
AA seq
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MMKHLYCTAGAGMEELLAEEVQHKLCATQVEQISGRVFFCSNADLHTVTQLKSAERLFLL
LRKAEPISLPNNPAKAAAVIKQRVVGDPDIWKQTLLTWTALQEELQGSQQRGHKRRREED
EEESLTVADESTRTLTSSTHLLKRQNETNKESREQTPSFRVSCRCSGVIARSYTSQRLGR
IIGMAIKEHLGWKVDLKEPVLEVNVYLSNDHCVVGIPLLKHPLASRSYMKHNGLRSTIAW
AMTSLCPKQLNDCVILDPMCGVGAVLLEAAQEYSNAVFLGMDTDTSQLQKAAENLKASGM
EGRVQLIRSSAMEIPLADGAVDAVLCDIPFGRKFSCSSDMPTALPRLLREMERVIRVGGH
LVLLLSLQLSAQLKKTICTHKNNQYLNSSDTNNVHTDPSNTHNESTDTPKTLLISSLQAQ
RTHRVSLGSTDAFIHIYTKIQTQAHSH
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcacttgtactgcactgcaggcgcggggatggaggagctgctggccgaggag
gtacaacacaaactctgcgctactcaagtggagcagatttcaggtagagtgttcttctgc
agcaatgctgatctgcacactgtgacacaactcaagtctgcagagaggctctttctactt
ctgcgcaaagctgaacccatttcacttcccaacaacccagcaaaggctgctgctgttata
aagcagagagtggtgggagatccagacatttggaagcagaccctcttaacatggacagcc
ctacaggaagagcttcagggcagccagcagcgtggacacaagagaaggagagaggaggat
gaggaggagagtttgactgtagcagatgaatccacacgcactcttacctccagcacacac
ttattaaaaagacaaaatgaaacgaataaggaatcacgtgagcaaacgccatccttcaga
gtgagctgccgctgtagtggagtcattgcccgctcttatacctctcagagactgggtcgt
atcattgggatggccatcaaagaacatcttgggtggaaggtggacctgaaagagcctgtt
cttgaagtaaatgtgtatttaagcaacgaccattgcgttgtaggcatccctcttttgaag
catcctttggccagtcgttcttatatgaaacacaacgggttgcgttctacaatagcctgg
gccatgacctctctttgccctaaacagctgaatgattgtgtgattttagacccaatgtgt
ggagtaggagcagtgttgttggaagcagctcaggagtattcaaatgctgtatttctaggc
atggatacagacacgtcgcagctgcagaaagccgcagagaacttgaaagcatctggaatg
gaaggaagagtgcagctaattcgttcttctgccatggagatccctcttgcagatggagca
gttgatgctgtgctctgtgatattccatttggcaggaagttcagctgcagctctgacatg
ccaactgccctgccacgcttactgagagagatggagagggtaattcgtgttggtggacat
cttgttctgttactgagtttgcagctttctgcacagcttaagaagacaatttgcactcac
aaaaacaaccaatacttaaactcctcagacacaaacaatgttcacactgacccctcaaac
acacacaatgaaagcactgacacaccaaaaacattattaattagctcattacaagcacag
aggacacacagggttagtctgggcagcacagacgcatttatacacatctacaccaaaata
caaactcaagcacactcgcactga
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