Megalobrama amblycephala (Wuchang bream): 125268722
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Entry
125268722 CDS
T08212
Symbol
slc8a1b
Name
(RefSeq) sodium/calcium exchanger 1b isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04020
Calcium signaling pathway
mamb04260
Cardiac muscle contraction
mamb04261
Adrenergic signaling in cardiomyocytes
mamb04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125268722 (slc8a1b)
04020 Calcium signaling pathway
125268722 (slc8a1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
125268722 (slc8a1b)
04261 Adrenergic signaling in cardiomyocytes
125268722 (slc8a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mamb02000
]
125268722 (slc8a1b)
00536 Glycosaminoglycan binding proteins [BR:
mamb00536
]
125268722 (slc8a1b)
Transporters [BR:
mamb02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
125268722 (slc8a1b)
Glycosaminoglycan binding proteins [BR:
mamb00536
]
Heparan sulfate / Heparin
Others
125268722 (slc8a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
Motif
Other DBs
NCBI-GeneID:
125268722
NCBI-ProteinID:
XP_048047085
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Position
LG5:20524939..20659009
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AA seq
942 aa
AA seq
DB search
MRHRETSPHLFLSFQCLVMVILLFSVHHVTAEHAPDHSQDHSSPANKSLSCGGIVTCSPG
VILPVWEPPNPSFGDKVARATVYFVALVYMFLGVSIIADRFMASIEVITSQEKEITIKKP
NGETTTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFEAGDLGPSTIVGSAAFN
MFVIIGICVYVVPDGEHRKVKHLRVFFVTAAWSIFAYLWLYLILAVISPGIVQVWEGLLT
LFFFPICVVFAWIADRRLLFYKYVYKRYRAGKHRGMIIETEGDRPLPSKVDIEMDGKMLN
SHAVDFLDGTLALELEDKDLDEEEARREMAKILKELKQKHPDKEVEQLIELANYQVLSQQ
QKSRAFYRCQATRLMTGAGNILKKHAADQARKAVSMHEVRSDTGENDPISKIFFDPGSYQ
CLENCGTVAVNVVRRGGDLSQTVSVEFRTEDGTANAGSDYEFTEGTVIFKPGETQKEIRV
GIIDDDIFEEDENFLIHLSNVRVLHEGDEPEATETNHVETIATLGVPSTATVTIFDDDHA
GIFTFEEPVTHVSESVGVMEVKVLRTSGARGVVSLPYKTVEGTARGGGEDFEDSHGVLEF
QNDEILKTITVRVLNREEYDKQCSFCIELQTPLWRRRGWTVYREEEKVAGKEEEEPLTGE
DDEERRIAEMGKPMLGDHPKLEVIIEESYEFKNTVDKLIKKTNLALLVGTNSWRDQFIEA
ITVSAGEDDDDEECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACFVVSIVMI
GLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQYADASIGNVT
GSNAVNVFLGIGVAWSIAAVYHNSKGRDFKVEPGSLAFSVTLFTIFAFICVAVLMYRRRP
DIGGELGGPRTAKGLTTMLFVSLWLLYILFSSLEAYCHIKGF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgtgagacctccccgcacctcttcctgagctttcagtgtctagtcatggtg
atactgctcttcagcgtccaccatgtgacagcggaacacgctccagaccacagccaagat
catagttctcctgccaacaagtctttgtcctgtggtgggattgtcacatgctcacctgga
gtcatccttccggtgtgggagcccccaaacccttcctttggggacaaggttgcccgggcc
actgtttactttgtggcactggtatacatgtttctgggagtttcgattattgctgaccgc
ttcatggcatccatcgaggtcatcacctctcaggagaaggagatcaccattaagaaaccg
aatggtgaaacgaccaccacaactgtacgcatctggaatgaaactgtgtccaacctcacc
ctcatggctctggggtcttctgctcctgagattctgctctcggtcattgaagtgtgcggc
cataactttgaagctggtgacctcggaccctctaccatagtcggcagtgcagctttcaac
atgttcgtcatcattggaatctgtgtctacgtggtgcccgacggagagcatcgcaaagtg
aaacacttgcgtgttttcttcgtcaccgccgcttggagcatcttcgcctacttgtggctc
tacctgatcttggctgttatctcgcctggcatcgtccaggtgtgggagggtcttctcact
cttttcttctttcctatttgcgtggtcttcgcttggatcgctgaccgccggctcctgttt
tacaagtacgtttacaagcgataccgagccggcaagcaccgtggcatgatcatcgagacg
gagggggaccgtcctctgccgtccaaggtggatattgagatggatgggaagatgctgaac
tctcacgcagtggacttcttggatggaacactggctctggaacttgaggacaaagaccta
gatgaggaggaagctagacgtgaaatggcaaagatcctgaaggaactgaagcagaaacat
ccggataaagaagtagagcagttgattgaactcgctaattaccaggtgctcagccagcag
cagaagagccgtgcattctaccgatgccaggcgactcgcttgatgactggagcaggtaac
attctaaagaagcatgcggcggaccaggctcgtaaagcagtgagcatgcacgaggtgcgc
agtgacactggtgagaatgacccgatttctaagatcttttttgaccctggttcttaccag
tgcctggaaaactgtggaactgtggcggtgaatgtggttcggcgtggaggcgatctcagc
cagactgtgtcggtggaattccgcacggaagacggaactgcaaatgccggctcagactat
gaattcactgaaggcactgtcattttcaagccaggtgagacgcagaaggagatccgagtt
ggaattattgacgatgacatctttgaagaggatgagaacttccttatccacctcagcaat
gtccgtgtgcttcatgagggtgatgagccagaggccactgaaaccaatcacgtggagacc
atcgcaaccctcggtgtgccctccacagcaacagtcaccatctttgacgatgaccatgct
ggaatcttcacatttgaagagccagtcacccacgttagtgagagtgtgggtgtcatggaa
gtgaaggtcctgcgtacatctggcgcccgtggggtggtgtcactgccgtataaaaccgtc
gagggcactgcccgtggagggggagaggactttgaagactcccatggtgtattggagttc
caaaacgacgaaatcttgaagacgataacagtcagggttctcaatcgagaggaatacgat
aagcaatgcagcttttgcatagagctacagacgccactttggagaaggagaggatggaca
gtatacagagaggaggagaaagtggcggggaaggaagaggaggagcctctgacaggtgaa
gatgacgaggaacgacgcatcgctgagatggggaagccaatgctcggagatcaccccaaa
ctggaggttatcatcgaggaatcttatgaatttaagaacactgttgataaactgattaaa
aagacaaacttggctcttctggtcggcaccaacagctggagggaccagttcatcgaggcc
atcacagtcagcgctggtgaggatgatgatgatgaagaatgcggagaggagaagctcccc
tcttgcttcgattacgtcatgcatttcctcaccgttttctggaaagttctcttcgccttt
gtccctcccaccgactactggaacgggtgggcttgtttcgtggtgtcaatcgttatgatt
ggcctcctgacggctttcatcggagacctagcatcccacttcggctgcaccatcggactc
aaagactccgtcacagccgtggtgtttgtggcactgggcacttcagtgccagacaccttt
gccagtaaagtggcagcgatacaggatcagtacgccgacgcatccatcggaaacgtgacc
ggcagcaatgccgtgaacgtcttcttgggcatcggagtggcctggtccatcgccgccgtc
taccacaactcgaagggccgcgatttcaaggtggagccgggcagcctggccttctccgtc
accctcttcaccattttcgccttcatctgcgtggcggtgctcatgtaccgccgccggccc
gacatcggcggcgagctggggggtccgcggactgctaaagggctgaccaccatgcttttc
gtcagcctctggctcctctacatcctgttctcctccctggaggcttactgccacatcaag
ggcttctaa
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