Megalobrama amblycephala (Wuchang bream): 125269025
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Entry
125269025 CDS
T08212
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125269025 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125269025 (capn3a)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
125269025 (capn3a)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C2: calpain family
125269025 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
125269025
NCBI-ProteinID:
XP_048047687
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All DBs
Position
LG5:29298840..29318635
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AA seq
663 aa
AA seq
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MCKISKLLCQLQTNTLMVFVLQEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLTLN
DKLLYRVIPQEQSFSEGYAGIFHFQFWRYGDWVDVVVDDRIPTFNNQLVFTKSAERNEFW
SALLEKAYAKLHGSYEALKGGNTAEGMEDFTGGVTEFYEMKEAPKELYKIMKKALERGSL
MGCSIDSLVPARFETRTTTGLVKGHAYSVTAVEECKQSQQKESKVRLVRLRNPWGQVEWN
GPWSDNSKEWETISKAEKEKLQHQNAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDDKL
HKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVACTFVVALMQ
KNRRRERKLGANLFTIGFSIYEVPKEMHGNKQHMQKEFFMSSSSKARSRAYINLREVTQR
FRLSPGEYVIIPSTYEPHQEGDFILRVFSEKRNTSEEIENRIEADHPVPAPASTGEESEE
DQQFLSIFQQIAGDVSTGEPLSAGGSQMEISANELKDVLNKVVSTYKDIHIEGFSRESCR
SMIALMDMDGTGRLNLQEFRHLWNKIKQWQGIFKRYDFDYIGTISSYEMRNAINDAGFRL
NNQLYDIVIIRYANENMNVDFDSFVSCLVRLEGMFRAFHAFDQCGDGTIRLNVLEWLQLT
MYA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaatttcaaagctcttgtgtcagttacaaacaaacactttgatggtatttgtt
ctgcaggagatttgtgaaaacccacagttcattgtcggaggtgctagcaggacagatatc
tgccagggagacctgggagactgctggttgcttgctgccattgcatgtctgactttaaat
gacaagctgctatatcgtgttatacctcaagagcagagcttctctgaaggctatgctgga
attttccatttccagttctggcgttatggtgactgggtggatgttgttgttgatgaccgc
attcccaccttcaacaaccagctggtgttcaccaagtcagctgaaaggaatgaattctgg
agtgctcttctggaaaaagcttatgctaagcttcatggttcctatgaggctcttaagggt
ggaaacactgcagagggaatggaggacttcaccggtggagtgactgaattctatgagatg
aaggaggcacctaaagagctgtataagatcatgaagaaagctctggagagaggctccctc
atgggctgctccattgattccctggttccagcccgcttcgaaactcgtaccactacaggt
cttgtgaagggtcatgcctactctgttactgctgtagaggagtgtaaacagtcccagcag
aaggagtccaaagtgcgtctggtgcgtttgcgtaacccctggggtcaggtagaatggaac
ggaccttggagtgataattcaaaggagtgggaaaccatctctaaagcggaaaaagagaaa
ctccagcatcagaatgctgaagatggagaattctggatgtcatttgaggattttaagaaa
aattacactaaaatagagatttgcaacctgacccctgatgctctggaggatgacaagtta
cacaaatggacggtgtctgttaatgagggacgctgggtaagaggctgctctgctggagga
tgcaggaattatccagacacattctggacaaatccacaataccgcctgcgtctcctggag
gaagatgatgacccggaggataatgaagtagcttgcacttttgttgttgctctaatgcag
aaaaacagacgtagagaacgcaagttgggtgcaaatctcttcactattggattttccatc
tatgaggtgccaaaggagatgcacggaaacaagcagcacatgcagaaggagttcttcatg
tctagctcctctaaggcccgctccagggcttacattaacctgcgagaggtgacccagcgc
ttccgtctgagtccaggggagtatgtcatcattccctccacctacgagccccaccaggaa
ggcgacttcatcctccgcgtcttctctgaaaagagaaatacctctgaggagatagagaac
aggattgaagctgatcatccagtgccggctccagcttcaactggggaagagagtgaggag
gaccagcagttcctgtccattttccagcagatcgcgggggacgtgagtactggggagcca
ctgagcgctggggggagtcaaatggagatctcagccaatgagctcaaagatgtcttgaac
aaggtggtgtctacatacaaggacatacacattgaaggcttcagtcgagagagctgtaga
agcatgatcgccctcatggatatggatggaaccggaagacttaacctgcaagagtttaga
cacttgtggaacaaaatcaaacagtggcagggaatctttaagcgctatgactttgattat
attgggactatcagcagctatgagatgagaaacgccatcaatgatgcaggtttccgtctg
aataaccagctgtatgacatcgtcatcatacgctatgccaatgaaaacatgaacgtcgac
tttgacagttttgttagctgtcttgtgcgactggagggaatgttcagagcattccatgcc
tttgatcaatgtggagatggcaccatcagacttaatgtactggagtggctccagctaacc
atgtatgcctag
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