Megalobrama amblycephala (Wuchang bream): 125269037
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Entry
125269037 CDS
T08212
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04141
Protein processing in endoplasmic reticulum
mamb04210
Apoptosis
mamb04217
Necroptosis
mamb04218
Cellular senescence
mamb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125269037
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125269037
04217 Necroptosis
125269037
04218 Cellular senescence
125269037
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125269037
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125269037
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
125269037
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C2: calpain family
125269037
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
COR
Motif
Other DBs
NCBI-GeneID:
125269037
NCBI-ProteinID:
XP_048047706
LinkDB
All DBs
Position
LG5:29454904..29494651
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AA seq
725 aa
AA seq
DB search
MPPPAVPHGMCLKVMDDRNMRGGMGSETNPLKFMNQDYNTLQEYCLKKGLRFVDEFFPPD
PRSIGEGLLDPEDMARVEWIRPTILCPNAAEFIVESVSRFDYSQGRVGNCWFLASVGALT
FQSKFLQKVMPDGQSFSRNYTGLFHFRFWRFGNWYDVVIDDKLPIIDKKLIFVQSKTYNE
FWPALMEKAYAKLCGSYADMHAGRVSEALMDFTGGVHIHYDLKTAPTDLWEIMYRAFQSE
VLMGCETPRGKKSEEELPNGIILGHAYTVTNVYQVMSGRYPVKLVRLFNPWGEKEWNGDW
SDRSPLWNTVSNEDRKQHLLDDNGEFWMSMEDFLRTFDNIDICCSCPDFLEGKSASRWTS
KYHNGSWVVGSTAGGCIKNQDTFCTNPQFWLKVNEMDKACEQGQSNVLVSLIQKPDKRNR
RLAAHHGIGFCVYAVPPEMRSEGKLGSIFFKHRNPVATSGDFQIARQVMSFFRLEPGQYV
IVPSTFYPNEHGEFILSILCKNEIHIQKDTERTEKNFLVDLLGESEPEYNEQMDEALNNK
SLLRQYSDQPGYNAQMDELSNKTLFRQYSDQYKVVDAEKLQQILHENLLKGNKNTEGFGL
DSCRSIIAMSDFSVSGRLRGTEFLRLWNRILTYKNIFYTMDSSKDGVLSFSELQNAFNKT
GMHLNEDILNLMFVRYGGASEQISLEGFICLVMRLNCMASIFQRLCENGKITLTESEWLG
LTMYS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctccagcagttccacatggcatgtgcctaaaagtcatggatgaccgcaacatg
aggggtggcatgggctctgaaacaaatcctttgaagttcatgaatcaggactacaacact
ttacaagagtactgtctcaagaaaggtctgagatttgtggatgagtttttcccaccagac
cctcgttccattggcgaagggctgctggatccggaagacatggcacgagtggagtggata
agaccaacgatattgtgtccaaatgcagctgaatttattgtagagtcagtgtctaggttt
gactactcccaagggcgagtaggaaactgctggtttctggcctctgttggggctttaaca
tttcaaagcaaatttttacaaaaggtcatgccagacggacaatcattcagccgcaattat
actggtttatttcacttcaggttctggcgttttggaaattggtatgatgttgtgattgat
gacaaactgccaataattgacaaaaagctgatttttgtgcaatcaaaaacatataatgag
ttctggccagccttgatggagaaagcgtatgccaagttgtgcggctcctacgctgacatg
catgctggtcgagtatctgaggccctcatggacttcaccggtggggttcatattcactac
gatctgaaaacggctccaactgatttgtgggagataatgtaccgtgctttccagtcagaa
gtccttatgggttgtgaaactccacgagggaaaaagagtgaggaagagttaccaaatggt
ataattctgggccatgcttacactgtgacaaacgtttaccaggtcatgagtggtagatat
cctgttaaactggtgagattgttcaacccatggggagaaaaagagtggaatggagactgg
agtgacagatcacccttgtggaacacagtgagtaatgaggaccgcaaacaacatcttctg
gacgataatggagagttctggatgtcaatggaagatttccttagaacatttgacaacatt
gatatctgctgttcctgtcctgattttctggaaggaaagtctgcatctcgctggacttcc
aagtatcacaatggcagctgggttgttgggagtacagctggaggctgcataaaaaatcaa
gacaccttttgtaccaacccccagttttggctgaaggttaatgagatggataaggcctgt
gagcagggccagagcaatgttctggtgtccctcatacagaaacctgacaagagaaacaga
cgccttgctgcacaccatggcatcggcttctgcgtgtatgcggttccacctgagatgaga
tctgagggaaagttgggatcaatctttttcaaacacagaaaccctgtggcaacaagtggg
gactttcagattgcaagacaggtgatgagcttcttcaggctggaaccaggacagtatgtc
attgtaccatccactttctaccccaatgagcacggagaattcatcctgtccattctgtgc
aaaaatgagatccacattcaaaaggacacagaaaggaccgagaaaaattttcttgtggat
cttttaggcgagtctgagcctgaatacaatgaacaaatggatgaagcattgaacaataaa
tctctgcttcgacaatattctgatcagcctggatacaatgcacaaatggatgaattgagc
aataaaactctgtttcgacaatattctgatcagtacaaggttgttgatgctgagaaactt
caacagattcttcatgaaaacctgcttaaagggaataaaaatactgaaggatttggcctg
gattcctgcagaagtataattgccatgtcagatttctctgtcagtggaagacttcgtgga
acagagtttcttcgcctgtggaaccgcatattgacgtacaagaacatcttctacaccatg
gattcttccaaagatggcgtactgtctttcagcgaactgcaaaacgcattcaataaaaca
ggcatgcatctaaatgaagacatcctgaatctcatgtttgtgcggtatggtggtgcttca
gaacagatttctctggagggtttcatttgccttgtcatgcgtttgaactgcatggctagt
atattccaaagactctgtgaaaatgggaagataactcttactgagagtgagtggttagga
ctcaccatgtattcatga
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