Megalobrama amblycephala (Wuchang bream): 125269039
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Entry
125269039 CDS
T08212
Symbol
si:ch211-202f3.3
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04141
Protein processing in endoplasmic reticulum
mamb04210
Apoptosis
mamb04217
Necroptosis
mamb04218
Cellular senescence
mamb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125269039 (si:ch211-202f3.3)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125269039 (si:ch211-202f3.3)
04217 Necroptosis
125269039 (si:ch211-202f3.3)
04218 Cellular senescence
125269039 (si:ch211-202f3.3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125269039 (si:ch211-202f3.3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125269039 (si:ch211-202f3.3)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
125269039 (si:ch211-202f3.3)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C2: calpain family
125269039 (si:ch211-202f3.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
CAPN13-like_C_EFh
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_3
SWIM
Motif
Other DBs
NCBI-GeneID:
125269039
NCBI-ProteinID:
XP_048047709
LinkDB
All DBs
Position
LG5:29500856..29513625
Genome browser
AA seq
767 aa
AA seq
DB search
MWRISVQMSFCQSLLCYKWGGASTSVLKLEVGKKCIKAGHRQRRLPVIWVKIHCISEEIQ
TDFKMPPPVVPHGMCLKVIDDRNMRGGMGSETNPLKFMDQDYKFLQDYCLKTRQRFVDEF
FPPDPRSIGEGLLKPEVMARVEWMRPTKLYPDAAEFIIESVSRFDYSQGNIGNCWFLASV
GALTFQSKLLHKVIPDGQSFSNNYTGLFHFRFWRFGKWYDVVIDDKLPTINRQLIFVKSK
TFNEFWPALLEKAYAKVCGSYADMHTGRVSEALMDFTGGVHMHYEMKTAPTDLWEIMYRA
FQSEVLMGCETPRGNHNEERLPNGIVLGHAYTVTKVYQVMSGRHPVQLVRLFNPWGDSEW
NGDWSDKSPLWNTVSDEDRKQHLLNENGEFWMPIKDFIRTFDNMDICCSCPDFLEGKSAC
HWISKSHHGSWVSGSTAGGCMNHLDTFCTNPQFWLKINEMDKACEQGQSNVLVSLIQKPD
KRNRRLAAHHGIGFCVFAVPPEMRSEGKLGSSFFYRRKPVATSGDFQDARQVMSFFRLEP
GEYLIVPSTYSPNKNAEFILSILCKNDIHIQKDTERTEKDFLVDLVGESEAGYAEQVDVG
LKDKTLFRQYSDQYKVVDAEKLQQLLQENLLRGNKNAEGFGLDSCRSIIAMSDFSVSGRL
RGSEFLRLWNRIMTYKNIFYSMDSSKDGVLSLSELQNALEKTGMHLNEDILNLMFVRYGG
ASEQISLEGFICLVMRLNCMASIFQKLCENGKISLNESEWIGLTMYS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggatttcagttcagatgagcttctgtcaatcacttctttgttataaatggggt
ggggcttctacaagtgttttgaagcttgaagtagggaaaaagtgtataaaagccggtcat
agacagagaagattaccagtcatttgggtgaaaattcattgcatctctgaagaaatccag
acagatttcaaaatgcctcctccagtggttccacatggcatgtgcctaaaagtcatagat
gaccgcaacatgaggggtggcatgggctctgaaacaaatcctttgaagttcatggatcag
gactacaaatttttacaagactactgtctcaaaacaagacagagatttgtggatgagttt
ttcccgccagaccctcgttccattggcgaagggctgctgaagccagaagtcatggcccga
gtggagtggatgagaccaacgaaattgtatccagatgcagctgagtttatcatagagtcg
gtgtctaggtttgactactcccaagggaatataggaaactgctggtttctggcctctgtt
ggggctctaacatttcaaagcaaattattacataaggtcatcccagatggacaatcattc
agcaacaattatactggtttatttcacttcaggttctggcggtttggaaaatggtatgat
gttgtgattgatgacaaactgccaacaatcaaccgccagctgatttttgtgaaatcaaaa
acatttaatgagttctggccagccttgctggagaaagcctatgccaaggtgtgcggctcc
tacgctgacatgcacactggccgggtatctgaggccctcatggacttcaccggtggggtt
catatgcactacgaaatgaaaacggctccgaccgatttatgggagataatgtaccgtgct
tttcagtcagaagtccttatgggctgtgaaactccacgagggaatcataatgaggaacga
ttaccaaatggcatagttctgggccacgcttacactgtgacaaaggtttaccaggtcatg
agtggtagacatccagttcagctggtgagattgttcaacccatggggagacagtgagtgg
aatggagactggagtgacaaatcacccttgtggaacacagtaagtgatgaggaccgtaaa
caacatcttctgaatgaaaatggagagttctggatgccaattaaagatttcattagaaca
tttgacaacatggatatctgctgttcctgtcctgattttctggaaggaaagtctgcatgt
cactggatttccaagagtcaccatggcagctgggtttctgggagtacagctggaggctgc
atgaatcatttagacaccttttgtaccaacccccagttttggctgaagattaatgagatg
gataaggcctgtgagcagggccagagcaatgttctggtgtccctcatacagaaacctgac
aagagaaacagacgccttgctgcacaccatggcatcggcttctgcgtgtttgcagttcca
cccgagatgagatctgagggaaagttgggatcaagctttttctatagaagaaagcctgtg
gcaacaagcggggactttcaggatgcaagacaggtgatgagcttcttcaggctagagcca
ggagagtatctcattgtaccgtccacttacagccccaataagaatgcagaattcatcctg
tccattctgtgcaaaaatgacatccacattcaaaaggacacagaacggaccgagaaagat
tttcttgtggatcttgtcggcgagtctgaggctggatacgctgaacaagtggatgtagga
ttgaaagataaaaccctgtttcgacaatattctgatcagtacaaagttgttgatgctgag
aaacttcaacagcttcttcaggaaaacctgcttagagggaataaaaatgctgaaggattt
ggcctggattcttgcagaagtataattgccatgtcagatttctctgtcagtggaagactt
cgtggatcagaatttcttcgtctgtggaaccgcattatgacgtacaagaatatcttctac
agcatggattcttccaaagatggcgtactgtctttgagcgaacttcaaaacgcattagag
aaaacaggcatgcatctaaatgaagacatcctgaatctcatgtttgtgcgctatggtggt
gcttcagaacagatttctctggagggtttcatttgccttgtcatgcgtttgaactgcatg
gctagcatattccagaaactctgtgaaaatgggaagatatctcttaatgagagtgagtgg
ataggactcaccatgtactcatga
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