Megalobrama amblycephala (Wuchang bream): 125269130
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Entry
125269130 CDS
T08212
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04020
Calcium signaling pathway
mamb04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125269130 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125269130 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
mamb04030
]
125269130 (ptafr)
G protein-coupled receptors [BR:
mamb04030
]
Rhodopsin family
Others
Platelet activating factor
125269130 (ptafr)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Tegument_dsDNA
CitMHS
Motif
Other DBs
NCBI-GeneID:
125269130
NCBI-ProteinID:
XP_048047851
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Position
LG5:33069572..33076629
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AA seq
391 aa
AA seq
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MKLHLFISCSQQEIADKYAMMRKKKASVMMIHKMTTTAAMLSTGNGSQENQTNKFIDSEF
RYTLFPIFYGMVFILGLLANLYALYVLHYMRESKAMNEIRIYMTNLTVADLLFVSALPFW
IGYYANHGDWKYSDALCRITGSFFFINTYCSVLFLTVISINRYWAVTRPLVAASSDCWKR
GAIVSAFIWVITLGASVKYLIEPGIQSDNNNTIHRCFEGYHYTDHSNRKAVAITHFIIIG
LFFLVFTVVIVCNVLIARALLSQPISQPRASTGKRPGGTKRRALRMLCGVVGVFVICFLP
HHVVQGPWTLSVLKLNDWSVETHQSFNDAHQITLMLMGINCLLDPLVYCFATTKFRKYIQ
GHFTRVKNNKHCSRNTLSTAMSLKSRHQSEL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcatctattcatttcctgctcacagcaagagattgcagataaatatgcaatg
atgagaaagaaaaaagcttctgttatgatgatacacaagatgacgactactgcagccatg
ttgagcactggaaatggcagccaagagaatcaaacaaacaaattcattgactcagagttt
cgttacactctctttcctatattctatggcatggtctttatcttggggttgctggccaac
ctctacgctctttatgtgttgcactatatgcgggagtctaaagctatgaatgagattcga
atctacatgaccaacctgactgttgcagaccttctgttcgtgtccgctctacctttctgg
attggctactacgcgaatcacggtgactggaagtactcggatgccctctgccgtatcaca
ggctcatttttcttcattaacacatactgctccgttctcttccttactgtcatcagcatt
aaccgttactgggctgttaccaggccactggtggctgcctcttctgactgctggaaacgt
ggagcaatcgtctcagcgttcatctgggtcatcactcttggcgcatcggttaaatacctc
attgagccgggaatccagagtgataataataacacaattcatcgctgtttcgagggttat
cactacacggatcactctaatagaaaagcagtggccatcacccacttcatcattattggc
ttgttctttcttgttttcacagtggtgattgtctgcaacgtcttgatcgctcgagctctt
ctgtcccaacccatcagtcagcctcgagccagcacgggaaagcgtcccggtggtaccaag
cgcagagctttgaggatgttgtgtggtgtcgtgggtgtctttgtgatctgtttcctgccc
catcatgtggtgcagggtccctggactttgtccgtgctgaagctgaatgattggagcgtg
gagactcaccaaagcttcaacgatgctcaccagatcactctcatgcttatggggatcaac
tgcctcctggacccgctggtttattgcttcgccaccacaaagttccgcaagtacatccag
ggtcatttcacaagggtcaagaataacaagcactgctcgcgcaacacattaagcacggct
atgtcactgaagagcagacatcagagtgaattatga
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