Megalobrama amblycephala (Wuchang bream): 125269266
Help
Entry
125269266 CDS
T08212
Symbol
cacna1ha
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125269266 (cacna1ha)
04020 Calcium signaling pathway
125269266 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125269266 (cacna1ha)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125269266 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
125269266
NCBI-ProteinID:
XP_048048115
LinkDB
All DBs
Position
LG1:38797980..38931284
Genome browser
AA seq
2323 aa
AA seq
DB search
MTDGEGREHFHYLERGEVRVPISALYRAPGPSEEIGDEEEKSSTWIPVHESSQAQGSGAR
DPTPDLVSDEEEQPPYPMLAPVVFFCIKQTTRPRSWCLRMVCNPWFEHVSMLVILLNCVT
LGMFQPCEDLKCQSEWCIILQAFDDCIFAFFAVEMVIKMIALGIFGSKCYLGDTWNRLDF
FIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLL
CFFVFFIFGIVGVQLWAGLLRNRCFMPDDVKALYNLSFMSPYYMNEDGEDNPFICSSIKE
NGMLRCSEVPPLKDGVECTLNASPPGHTYSGLDGTSNSSCINWNQYYNVCKAGELNPHKG
AVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVV
IATQFSETKQRENQLMQEQRACYLSNDSTLASYSEPGSCYEEMLRYISHLYRKVKRRASR
IYNGWQSKRRKKVNPNSVLSGGGGSSGGGANGHSRHRGGGHWVRSIHNLIQQHQRQHCHL
SNGSPSPVASTGPGEALEMRSITTGPQLTVCSQPTGMHNLSSRTQSVHSIYQGDFHEAPQ
GRMSATVGVPPLGRLNGGMNYPTILPSLLCSYTGSSSAGKGRRESDINTGCDAIDPFEKL
HQLMGEHSHSRVLLQIAGVVPSQLLLELLSCPYCTRALENLDLELGDSDYSRSEGDVVYE
FSHGAEFKPSRAPHHKILEERNRLAQYWEDFRDRLTRIVDSKYFNRGIMIAILINTLSMG
IEYHDQPPELTHILEISNIVFTSMFVLEMLFKLLAFGTFGYIKNPYNIFDGIIVVISVWE
IIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSI
LGMHLFGCKFSMKTENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWA
ALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDADEEKRSLNFEEEEKMGELRDTE
LKMYSLMMSANGHVDPRGTLPPPIIMRTAATPMPTPKSSLGPESVFGLTESRRGSGISID
PNAFDQKSLTSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSGERESLLSGDGR
GSFEDEDLEGEKLANISGGSLQHPSSLDIPELPQTPSFSSLGEYHDCNGRSLHIPTDLST
TLSKEDSIAEEDMDDSFCLRLKRTLEAYKPKWCKDHEDWSLYLFSPQNKFRMICQRLISH
KMFDHAVLVFIFLNCITIALERPTIQPPERMFLSISNYVFTVIFVAEMTVKVVALGFCSG
KHSYLQSTWNVLDGVLVFVSLIDILVSLASTGGNRILGILRVLRLLRTLRPLRVISRAPG
LKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGADTKNITNMEECKS
EGYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVNQQPVRNHNPWMLLYF
ISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARMREEKRQKLLEKKRRSKENCGSEA
QQRPYYADYSPARLYIHTLCTNHYLDLFITGIICINVVTMSIEHFNQPLYLEEALKYCNY
VFTVIFIIEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNAALPINPTII
RIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKL
ECTDENPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECDQAEDKNCVPYLP
LVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMKMARRLSNV
SAGSSSEPEGRATYVGPRPDSPRQDEGMQRTQENLLSPRKMSVSRMHSLPNDSYMFRPVR
PASAPYPLEEVETSQGYLELGSITSVHSQPCESRSLLQVPGVPPHSQFNFLPKIPPPIPS
PTHSIGRTLRRQEAIKNDSIDVQSFDSKDNLERQAGITTGFKLHVPRIGSHSIPQASPLL
PPHGQLPSVRTFQQSHSQHNIHSRPPSLASSSRSTSPSGSMFDSADPTDEEVRHINSTAR
LWAGVQAEARSHSLSPYATSGTLLPMLMKNCSSAANLGELSIKDPKKCFSVDTEGFLEKP
HGTDDHRRHSIEICSSVDDGLFGQELSEKRHVPMRGQSLHIPRKKKMSPPCISIEPPFEM
EAPASLASMKKLSESSMLLRRRTPSYDLALQRDSLDLPENQLSTQPLIKVERHPSHCAEY
LSLPHPAPMGSLAGILCESTQPPPFDSRFEESTDFSSINRTAQ
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagaacactttcattacttggagagaggagaggtaagagtt
cccatttcagccctgtaccgggcgcctggtcccagtgaagagatcggcgatgaggaggaa
aagagcagcacatggatcccggtccatgagagctctcaggcacaggggtctggggcccgg
gaccccactccagatttggtctccgatgaggaggagcagcccccctacccgatgcttgcg
cctgtggtgttcttctgcatcaaacagaccactcgtccacgtagctggtgtctcaggatg
gtttgcaacccatggtttgagcatgtgagcatgctggtgattctactgaactgcgtgact
ctgggcatgttccagccatgtgaggacctcaagtgccagtctgagtggtgtatcatctta
caggcatttgatgactgtatcttcgccttctttgctgtggagatggtcattaaaatgata
gccctggggatatttggatcaaagtgttaccttggtgacacatggaaccgcctggacttc
ttcattgtcatggcagggatgatggagtattcactggatggtcataacgccagcctgtca
gccatccggactgtgcgagtgctcaggcccctgcgagccatcaacagagtgcctagtatg
aggatactggtgaccctgcttcttgatactctgcctatgttaggcaacgtcctcctgctg
tgcttttttgtcttctttatattcggcattgtcggggtgcagctgtgggctggactgctt
aggaatcggtgtttcatgccagatgacgtgaaagccctttacaatctttcgttcatgagt
ccgtactacatgaatgaagacggtgaggataaccccttcatctgctcctccattaaggag
aacggcatgctgcgctgcagtgaggtgccccccctcaaggatggtgttgagtgcacttta
aatgcatctccaccgggacatacctactctggcctggatgggaccagcaacagcagctgt
attaactggaaccagtattacaatgtgtgtaaggccggggagctcaacccgcacaaaggg
gcagtgaacttcgataatataggatatgcctggattgcgatattccaggttattactttg
gaaggatgggtggacatcatgtattacgttatggatgcccactccttttacaattttata
tattttatattgcttattatagtgggttccttcttcatgatcaacctgtgcctggttgta
atagcaacccagttctcagaaacaaaacagcgtgagaaccagctgatgcaagagcagcga
gcatgttacctctccaacgacagcacccttgccagctactctgagccggggagctgctac
gaggagatgctcaggtacatcagccacctgtaccgcaaggtgaagcgtcgcgcttctcgc
atctacaacggctggcagagcaagcgcagaaagaaggtgaaccccaacagcgttctgagt
gggggaggaggcagcagcggtggtggggccaacggtcacagcaggcacaggggtggtgga
cactgggtccgttccatccacaacctcatccaacagcaccaacgacagcactgtcacctc
agcaatggcagccccagtcctgtggcctctacggggcccggcgaggctctggaaatgagg
tctatcacaacggggccgcaactgaccgtgtgctctcagccaactggcatgcacaatctt
tcttccaggactcagtcagtgcacagcatttatcaaggtgactttcacgaggccccgcaa
gggcgaatgagcgccacggtgggcgtgccaccacttggacgactaaacggggggatgaac
tatccaaccatcttgccctccctcctctgcagctatacaggcagcagttctgcagggaaa
gggaggagggaatcggatataaatacaggatgtgatgcaattgatccctttgagaagttg
caccagctcatgggtgaacatagccacagtcgtgtgctgttgcagatagctggtgtggtg
cccagtcagttgcttcttgagctcctgagttgcccgtattgcacaagggccctggagaac
ttggatctggagctcggtgattcagactactccagatcagaaggagacgtggtgtatgag
ttctcccatggagcagagttcaaacccagccgtgcaccccatcataaaatactggaggag
cgtaaccgccttgctcaatactgggaggacttccgggaccgattgacacgcatagtggat
agcaaatactttaatcgaggaattatgattgccatccttatcaacaccttgagtatgggg
attgaatatcatgaccagcccccggagctgacacatattctggagatcagcaacatcgtc
ttcactagcatgtttgtcctggaaatgctttttaaactgctggcctttggtaccttcggc
tatatcaagaacccctacaatatctttgatgggattattgtagtcataagtgtgtgggag
atcatagggcaggcggatgggggtctttcagtgctgaggacatttcgtctcctgcgtgta
ctcaaactggtgcgcttcctccctgcactgcgcagacagctggtggtgctgatgaagacc
atggacaatgtggcaaccttctgcatgctgctcatgcttttcatcttcacattcagcatt
cttggaatgcatctgtttggatgcaaattcagcatgaagacggagaatggagacaccatt
cctgacaggaaaaactttgattccctgctgtgggccattgtcactgtgtttcagattctg
acccaggaagactggaacgtggtcctctataatggaatggcctccacctccccatgggcg
gctctttactttgtggctctgatgacctttgggaattatgtcctctttaacctgcttgtg
gccatcttagtggaggggtttcaggcagagggagatgctaacagatcagatgcggatgaa
gagaagcgatcgctgaactttgaagaggaggagaagatgggggaattacgagatacagag
ttgaagatgtattctttgatgatgtcggcgaatgggcatgtggatcctcgtggcactttg
ccccctccaatcatcatgcgcactgctgccacacccatgcccactccaaagagctctctt
ggcccggagtcagtatttggtttgaccgagtccaggcggggcagtgggatctcgatagat
ccaaatgcttttgatcagaaatccctgactagcccaagaagatctccgtgccacccccgt
ggctcaggcagcaactggggcagccgtagatccagctggaacagtttagggcgtgcgccg
agtttgaaaaggaaggacacgtctggggagagggagtctctgctttctggggatggcagg
ggtagttttgaggatgaggacctggagggtgagaaactggccaatatcagtgggggctca
ctgcagcatccaagctctctcgatatccctgagctgccccagactcccagcttcagctct
ttgggggaataccacgactgcaatgggagaagcctgcacatacccactgacctgtccacc
accctgagcaaagaagactccatcgcagaggaggacatggatgatagtttctgtctccgt
ctcaagaggacattagaagcatataaacctaagtggtgtaaagatcatgaggactggtcc
ctttatctgttctcgcctcagaacaagtttcggatgatttgtcagaggttaatttcacac
aaaatgtttgatcatgcagttttggtattcatcttcttaaactgcatcactattgctctg
gaaagacccactatacagccacctgagagaatgtttctcagtatctcaaattatgttttc
actgtgatttttgttgctgaaatgactgtgaaggtggtggcccttggcttctgctccggg
aaacacagttatctgcagagcacctggaatgttctggatggggtgctggtttttgtctct
ctcattgacattctggtctctctggcttccactggtggaaaccgaatccttggcatcctg
agggttcttcgcctgctgagaactctgcggccactaagagtgattagtcgtgctcctgga
ctgaagctggtggtggaaacgctaataacgtccctgaggcccattgggaacattgtgctg
atctgctgtgccttctttattgtctttggcattcttggagttcagctcttcaaaggaaag
ttttaccattgtgaaggtgctgacaccaaaaacatcaccaatatggaagaatgtaaaagt
gaaggttacaaatggattcggagaaagtacaactttgacaacttgggacaggctctcatg
tctctgttcgtgctttcctgtaaggacggatgggtcaatataatgtatgacgggttggac
gctgtcggggtgaaccagcagcctgtgcgcaatcacaacccctggatgctcctctacttc
atctctttcctgctgatcgtcagcttttttgtgctgaacatgtttgtgggagtggtggtg
gagaacttccacaagtgtcgtcaggaccaggaggaagaggaggcgcgtatgcgtgaggag
aagaggcagaaactgctggagaaaaagcgcaggagtaaggagaattgcgggtctgaggcc
cagcagagaccgtactatgcagattactctccagcccggctctacatccacacactgtgt
accaaccactacctggacctcttcattaccggcatcatctgcatcaatgtagttactatg
tcaatcgagcatttcaatcagccactgtaccttgaagaggcattgaaatactgtaactat
gtctttaccgtcatcttcataattgaggctttgctcaaacttgtcgcatttggttttcgg
agattcttcaaagacagatggaaccagctggatctagccatagtcctgctctctatcatg
ggcatcacacttgaggagatcaagatgaatgcagcactgccaatcaatcccaccatcatc
cgcattatgagggtgctgagaatagctagagtactgaagcttttgaagatggctacaggc
atgagagccctgctggacacagtaatgcaagctttaccacaggtgggaaatctgggcttg
ctgtttatgctcctcttcttcatttatgcggcacttggcgtggagctttttgggaaacta
gaatgcactgacgaaaacccatgtgaaggattaagtcgacatgctacgtttgagaacttt
ggaatggcctttttaacgttattcagagtgtcgacgggggacaactggaatggcataatg
aaggacactctgcgagagtgcgatcaagcagaagataagaactgcgtcccctatctgcct
ctggtctcccccatctacttcgtcacctttgtgctgatggctcagtttgtgctggttaac
gtggtggtggctgtattgatgaaacacctggaggagagcaataaggaggctaaagaagat
gcagaaatggacgctgagattgagatggagatgaaaatggctcgccgtctcagcaacgtc
tcagcagggagttcttcagaacctgaaggcagggcaacttatgttggaccacgcccagat
tcacccagacaggatgaggggatgcaaagaacacaggagaatttactctctccacggaaa
atgtcagtgtcaaggatgcactctttgcccaatgacagctacatgtttcgtcctgtgagg
ccagccagtgctccctatccacttgaagaagtggagaccagtcaagggtaccttgaatta
ggctccatcacctcagtccactcacagccatgcgaaagccgttccctgctccaggtccct
ggtgttcctccccattcccaattcaacttcctccccaagatcccccctcccattccctct
ccaacccacagcataggcaggactttacgcagacaggaggcaatcaaaaatgattccatc
gacgtgcaaagttttgactccaaggataatcttgaaagacaggcagggataaccacaggc
ttcaagctgcatgttcctcggatcggcagccacagcatccctcaggcgtcacccttgctt
cccccacatggacaattacccagtgtccgcaccttccagcagtcccatagccagcacaat
atccattctcgacctcccagcctggccagcagcagcagaagcaccagccccagtggctcc
atgtttgactccgctgatccgaccgacgaggaggtccgccacatcaacagtacagcgcgg
ctgtgggcaggggtccaggcagaagcacggagtcactccctctctccttacgccacctca
gggacgctgcttcccatgctcatgaagaactgcagcagtgctgccaacttaggagagtta
agcatcaaagacccgaagaagtgcttcagtgtggacactgagggttttctggaaaaaccc
cacggtaccgatgaccatcgcaggcactcaattgagatttgctcttcagtagatgatggg
ctgtttggtcaagagctcagcgaaaagaggcacgttcctatgcgcggacagtcgttgcac
attccccggaagaaaaagatgagccctccctgtatctccattgagcctccatttgaaatg
gaggcccctgcctctcttgcatccatgaaaaagctgtccgagagcagcatgttactccgg
aggaggacgccatcctatgacctggccctgcagcgggactctctggatttgccggagaac
cagctgtctacccagccgctcatcaaagtagagcggcacccctctcactgtgccgagtat
ctgtccctgccgcaccccgccccaatgggcagtctggcaggcattctgtgtgaaagcaca
cagccgcccccctttgacagcagatttgaagaatccacggacttcagctctataaacagg
acagcccaatga
DBGET
integrated database retrieval system
