Megalobrama amblycephala (Wuchang bream): 125269395
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Entry
125269395 CDS
T08212
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00260
Glycine, serine and threonine metabolism
mamb00630
Glyoxylate and dicarboxylate metabolism
mamb00670
One carbon pool by folate
mamb01100
Metabolic pathways
mamb01200
Carbon metabolism
mamb01230
Biosynthesis of amino acids
mamb01240
Biosynthesis of cofactors
mamb04981
Folate transport and metabolism
Module
mamb_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
125269395 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
125269395 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
125269395 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
125269395 (shmt1)
Enzymes [BR:
mamb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
125269395 (shmt1)
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GFIT
Motif
Pfam:
SHMT
SHCBP_N
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
125269395
NCBI-ProteinID:
XP_048048307
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All DBs
Position
LG1:complement(39116411..39123185)
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AA seq
544 aa
AA seq
DB search
MQAVSRQSLVGGAGGHRLATPRSVLIGLQISRTLARGNLKERKLTLKVIWDAPFITFVKR
SSTMAQLNGHNNKTWESHNKMMLEPLSTNDPEVFDIIKKEKRRQTYGLELIASENFTSRA
VLEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQARALKVYGLDPDKWGVNVQPYSG
SPANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPETGY
IDYDRLEENARLFHPRLIIAGTSCYSRNLDYSRLRKIADENGAYLLADMAHISGLVAAGV
VPSPFEYCDVVSTTTHKTLRGCRAGVIFFRKGVRSVDAKTGRETLYNLESLINQAVFPGL
QGGPHNHAIAGVAVALKQALTPEFKTYQLQVLANCKALATTLMEKGYKVVTGGSDNHLIL
VDLRSNGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRLGSPALTSRGLLEDDFSK
VAEFIHQGIELTLEIQRNMNPKATLKEFKEELAQNEKYQLKINKIRKEVEDFSGKFPMPG
LPEL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgtatcacgccagtcattagtaggcggggcaggaggtcatcgactagccacg
ccccgcagcgtgctcattggtctccaaatttcgcggactttggcacgaggaaaccttaaa
gaaagaaaactgacattgaaagttatttgggacgcaccgttcatcacgtttgttaagaga
tcatcaactatggctcagctcaacggccataataataaaacatgggaatctcataacaag
atgatgctggaacctctgagcacaaatgatcctgaggtatttgacataataaagaaggag
aagcggcggcagacgtatggattagagctcattgcctctgagaacttcactagtcgagct
gttttggaggctcttggttcctgcatgaacaacaaatactctgagggttatcctggtcag
agatattatggaggcacggagcatgttgatgaactggagcgtttgtgtcaggcgagagct
ctcaaggtgtacggcctcgacccggataaatggggcgtgaatgttcagccatactctggg
tcacctgcgaactttgctgtatacacagccatagtggaacctcatgggcggatcatgggc
cttgatcttcccgatggtggccatctcacccacggcttcatgactgacaagaagaaaatc
tcagccacgtccattttctttgagtctatgccttataaggtaaatccagaaactggatat
attgattatgacagacttgaggaaaacgctcgcctcttccacccaagactaatcattgca
ggaaccagctgctattcccgtaacctggactacagtcggctgaggaagatcgcagatgag
aatggagcgtatcttctggcagacatggctcacatcagtggtctggtggcagcaggagtc
gttccatctccgtttgaatactgtgatgttgtttccaccacgacccataagaccctgagg
ggctgcagggcaggagtcattttctttaggaagggagttcgtagtgttgatgcaaagaca
ggcagagagaccctgtataacctggagagtctgattaaccaggccgtgtttcctggactg
cagggtggccctcacaaccatgccattgcaggggttgctgttgctttgaagcaggctctg
actccagagttcaagacctatcaattgcaagttctggcaaattgtaaggctttagcaacc
accctaatggaaaagggctacaaagttgttacaggtggctctgataatcatctcatcttg
gttgatttacgttcaaatggtactgatggaggaagggcagagaaagtgctggaggcttgt
gccattgcctgcaacaagaacacctgcccaggtgataaaagtgccttgcgccccagcggc
cttcgtttaggatctcccgctcttacatctcgaggactattggaggacgatttcagtaag
gttgccgagttcattcaccagggcattgagttgacattggagatacaaagaaacatgaat
cctaaagcaactctgaaggagtttaaagaggaactggcccaaaatgagaagtaccaactg
aaaataaacaaaatccgaaaggaagtcgaagacttttctggaaagttcccaatgcctggg
ttgccagagttataa
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