Megalobrama amblycephala (Wuchang bream): 125269430
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Entry
125269430 CDS
T08212
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125269430 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125269430 (cpsf4)
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125269430 (cpsf4)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125269430 (cpsf4)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125269430 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
125269430
NCBI-ProteinID:
XP_048048320
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All DBs
Position
LG1:39135708..39140111
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AA seq
273 aa
AA seq
DB search
MQELIANVDHLKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACIKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGATEQPP
LPQQAQSQQKVFLNQQNMQPINRSSQSLIQLTNPNINNNHQRIPNAVGIMHSNNMGGPRG
PRPLDQVTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattaatcgcaaatgtcgatcacctcaagtttgatctagaaattgctgtagaa
caacaattgggcgctcaaccattgccatttccaggaatggataagtctggcgctgctgtg
tgcgagttcttcatgagagctgcctgtataaaaggtggaatgtgtccattcagacacatc
agtggagaaaagactgtggtgtgcaagcactggcttagaggtttatgcaagaaaggagac
caatgtgaatttttacacgagtatgatatgacaaagatgcctgaatgttatttctactct
aaattcggggagtgcagtaacaaagagtgtccattcttgcacattgatccagaatctaag
attaaagattgcccatggtatgatagaggtttttgtaagcatggtccggattgcaggcac
agacacacaagaagagtcatttgtgtaaattaccttgttggcttctgcccggagggcaag
tcatgcaaatttatgcacccaagatttgaacttccaatgggtgcgactgaacagccacca
ctaccgcaacaagcacagtctcagcaaaaggtttttttaaatcagcaaaacatgcagccc
ataaacagatcttcacagtcactcatccaattaaccaacccaaatatcaacaacaaccac
cagagaattccaaatgctgttgggataatgcattctaacaacatgggtggacctcgcggt
cctcgtccactggaccaagttacgtgttacaagtgtggtgagaagggccattacgcaaac
aaatgcacaaaaggacacctggcgtttttgagtggacagtag
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