Megalobrama amblycephala (Wuchang bream): 125269546
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Entry
125269546 CDS
T08212
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125269546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125269546
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125269546
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125269546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_UBOX
zf-C3HC4
KH_DTX3L
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_4
zf-RING_6
zf-RING_10
RING_XB3-XBAT31
zf-RING_5
Baculo_IE-1
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125269546
NCBI-ProteinID:
XP_048048388
LinkDB
All DBs
Position
LG6:complement(99480..129289)
Genome browser
AA seq
1016 aa
AA seq
DB search
MSHGQEQTVDEPMEIVENGIQQGSSPSSTDDDPMSDWTHIQNDPDLYTSTGNQGSPSFEM
KRLNFTSHRSGSQQNEDLHTAGAGGHDFRPAQNFPLAGAHSSGSQQNEDLHTAGAGGHDF
RPAQNFPLAGAHSSGSQQNEALLVQLMQNNQLFNDQGISGHVITEQPIGSSGQHLSTVGH
DHPQTPPSSSSDGLFQDLRTAGAGDQGSRKTVADIKHQNFKTHRSDSQQNENLLTSSADG
QFSNGQVFTAGAGVQDPSTTQSFTSAGAHSSGSWRNEDLRTAGAEGQDSRTTPHGRKNQS
NTMDQTHKSDKSEEDNCKGGDKSQPSAPLDTAKFIIKVDMTAPFPDKWSKTLEKALQSWL
LKNEGTASVLSLELMDDQSCAEVEITPSRALEALKKPNGIPLNIKHNNKEVTAWICLDKT
PSKTGQQNPSMPDRNQILSPKVTSPVPVMSAALKDSNNVNDVVPANSGLNVPLYQFWYMH
HAYRKELEQIEKRHGVSIFAEVSVSINPTKSPSPDSVSKATDEVQTLVQRSVDSFSDAAI
NHNHLDSDIVKEALRHIQSEEEKMMFTMSASNCLFFGPKKFTDVIKKEVERGSQFNYKSS
QMDVDNNFSPQIRSSLDMDIKELPTQLEMDKIYWDLMKLSYENQLSQLETKYGVTFNEEK
QQKNVTIKVQARSNGVQRINLESHAIRALTQLYQKLASAAVTCELKNLKDKTLVASTVEK
LQQQHQCVVAADVLSPWRLVGLPEHLGPAIAEIEKILKMSVFDDKMKKSIGYSGDIPHAR
GIKWNQTPNYGSGAVGGSVRDEGENFRRQSEETGFNEDSKHSSGHESKDAHAEEEKCAIC
MDIFTDKKKLKCGHEFCRDCISASEKSLGSICPVCKEVYGTLEGNQPDGTMKVTKSRSNL
PGYPHCGSIEINYYIHDGFQTEKHPNPGKRFLGTHRQAYLPDNYEGNEVLSLLHRAFQQK
LIFTVGKSTTTGMDNVVTWNDIHHKTSRSGGPQSYGYPDPDYLKRVKDELKAKGIE
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatggacaggagcagacagtggacgagccaatggaaattgtcgaaaatgggatt
cagcaaggttcctctccatcaagcactgatgatgatccaatgtcggactggactcacatt
caaaatgatccggacttatatacaagcactggaaatcaaggctcaccttcatttgaaatg
aagcgtctaaacttcacatcacacagatcaggctcacagcaaaatgaggacttgcataca
gcaggtgctggaggtcatgactttagaccagctcaaaactttccattggctggagcacac
agttcaggctcacagcaaaatgaggacttgcatacagcaggtgctggaggtcatgacttt
agaccagctcaaaactttccattggctggagcacacagttcaggctcacagcaaaatgag
gccctacttgttcagctgatgcaaaacaatcagctttttaatgatcagggaatcagtggc
catgtaatcactgaacaacccattggctccagtggacaacacctttccacggtgggacat
gatcacccgcagaccccaccttcatcaagcagtgacggtctgtttcaggacttacgtacg
gcaggcgctggagatcaaggttctagaaaaactgtggctgacattaaacatcaaaacttc
aaaacacacagatcagactcacaacaaaacgagaacctgcttacatcaagcgctgatggt
cagttttctaatggtcaggtctttacagcaggcgctggagttcaagaccctagtacaact
caaagcttcacatcggctggagcacacagttcaggctcatggcgaaatgaggacttgcgt
actgcaggagctgaaggtcaagactctagaacaactcctcatggcaggaagaatcaaagc
aacacaatggatcaaacacacaaatctgacaaatcagaagaggacaattgtaaaggtggt
gataaatcacaaccttcagcaccactggatactgctaaatttataatcaaagtggacatg
acagcaccttttcctgacaaatggagtaagacattagagaaagcccttcagagctggttg
ctcaaaaatgaaggaacagcatctgtcctcagccttgaactcatggatgatcagtcctgt
gcagaggtggagataacaccatcaagagctctagaagctttaaaaaagcctaatggtata
cctttgaacattaaacataataataaggaagtgactgcatggatttgcttggataaaaca
ccttctaagactggacaacaaaacccctccatgccggacaggaaccaaattttgtcacca
aaggtgaccagccctgtgcctgtgatgtctgcagcattaaaagactcaaacaatgttaac
gacgttgttccagctaacagtggactcaatgtccctctctatcagttctggtacatgcat
cacgcttacagaaaggagttggagcaaattgagaaacggcatggagtctctatttttgca
gaagtgtccgtctcaatcaatcccaccaagagtccaagccctgattctgtgtctaaagcc
actgatgaagttcagacacttgttcagagatctgtggatagttttagtgatgctgccatt
aatcataatcacttggattcagatattgtgaaggaggcccttcgtcacatccagtcagag
gaggaaaagatgatgttcaccatgtctgccagtaactgcctgttctttggaccgaagaaa
tttacagatgtaattaagaaagaggtagaaagaggtagccaattcaattacaagtcaagt
caaatggatgtagacaacaacttttctccacaaatcaggtcttcattggacatggacata
aaggagcttccaactcaacttgagatggacaagatttattgggatctgatgaaactttcc
tatgagaatcaattatcacagcttgaaacaaagtatggagtgacatttaatgaagaaaaa
cagcagaaaaatgtaaccattaaagttcaagctcgatccaatggagttcaacgtattaat
cttgaaagtcatgccatcagagcattaacacaactctaccagaaactcgcatcagccgct
gtcacctgtgaactcaaaaaccttaaagacaaaactcttgtggcatcaacagtagagaag
cttcagcagcagcatcaatgtgttgttgcagcagatgtattgagtccctggagactcgtt
ggactgccagagcacctcggtcctgccattgctgaaattgagaagattctcaagatgagt
gtgtttgatgacaagatgaagaaatcgattggttactcaggggacattcctcacgctaga
ggaatcaaatggaatcagacgcctaattatggatcaggagcagtaggaggatcagtacgg
gatgagggagagaattttagaagacaaagtgaagaaactggattcaatgaagattcaaaa
cacagttctggacatgagagtaaagatgctcatgctgaagaggagaaatgtgctatttgt
atggacatcttcaccgacaagaaaaaactgaaatgcgggcatgaattctgtcgggattgt
ataagcgcatcggagaagagtctgggatccatctgtcctgtgtgtaaggaagtgtatggg
acactggagggaaaccaaccggatggaacaatgaaggtaacaaagagcagatcgaatctc
cctggatatccacattgtggctctattgaaatcaactactacatacatgatggttttcaa
acggagaagcatccaaacccagggaaacgttttcttgggacacatcgtcaagcgtacttg
cctgacaattatgaaggaaatgaagtgctctcactgctgcacagggcttttcaacagaaa
ctgatctttactgtcgggaaatctacaactaccggcatggataatgtggtcacctggaat
gatattcatcataagaccagtagatctggtggacctcaaagttacggctatccagaccct
gactacctgaagagagtgaaagatgagttaaaggccaaaggcattgaataa
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