Megalobrama amblycephala (Wuchang bream): 125269562
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Entry
125269562 CDS
T08212
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04120
Ubiquitin mediated proteolysis
mamb04137
Mitophagy - animal
mamb04144
Endocytosis
mamb04340
Hedgehog signaling pathway
mamb04350
TGF-beta signaling pathway
mamb04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125269562 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125269562 (smurf1)
04350 TGF-beta signaling pathway
125269562 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125269562 (smurf1)
04137 Mitophagy - animal
125269562 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
125269562 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125269562 (smurf1)
04121 Ubiquitin system [BR:
mamb04121
]
125269562 (smurf1)
03029 Mitochondrial biogenesis [BR:
mamb03029
]
125269562 (smurf1)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125269562 (smurf1)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125269562 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
125269562 (smurf1)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
HECT type E3
125269562 (smurf1)
Mitochondrial biogenesis [BR:
mamb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125269562 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
125269562
NCBI-ProteinID:
XP_048048414
LinkDB
All DBs
Position
LG1:complement(39398120..39445183)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPM
PYTDPTGAAGGGNCRALESPNQEQRLQAQRIRNQDSRGHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQHSQVKESSQALPVQMEVGMEEGDGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLCDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGKNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNK
ELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctgggactcgaaggaacgggtcaagcatcaaaatccgactgacagtatta
tgtgccaagaatctggcaaagaaagacttcttccggttgcctgatcctttcgccaaagtg
gtggtggatggctcgggtcaatgccactctacagacacggtcaaaagcacattggacccc
aagtggaatcagcattacgacctgtatattgggaagaccgattccatcaccattagtgta
tggaaccataagaagatccataagaagcagggggcgggtttcttaggctgtgtgcggctc
ctgtccaatgccatcagcagattaaaagacacaggctaccagcgtttagacttgtgcaag
ttgaacccatctgacagtgatgcggtccgtggacaaatcgttgtgagcctgcaaaccaga
gacagaattggcagtggaggtcctgtggtcgactgtagaggactggtagagaatgaaggg
ccagtttttgaggactcggggcccggacggcctctcagctgttttatggaggagcccatg
ccatacacagatcccacaggggccgctggcggaggaaactgccgtgcacttgagtcaccc
aatcaggagcagcgactccaagcacaacggatcagaaaccaagattcccgagggcacgca
cacacaccccagaaccgaccacacggacaccagtcccccgacctccctgagggctacgag
caaaggaccactgtgcagggccaagtctattttctgcacacacagactggcgtgagcacc
tggcatgatcctagaataccccgggatttgaacagcgtgagttgtgaggagctgggccct
ctgccgcccggctgggagatcaggagcactgtgtcaggacgaatttattttgtcgaccac
aataatagaaccacacaattcaccgaccccaggttacaccacatcatgagccagcactct
caggtgaaggagtcgagccaggctttgcccgtacagatggaggtcggtatggaggagggt
gacggggagttaccggtgcgctacgagagagatctggtacaaaaacttaaagttctccgg
catgagctctccctgcagcagcctcaggccggccactgccgcatagaagtgtcccgtgag
gagatctttgaggagtcttataggcagatcatgaagatgagacccaaagacctgaagaag
cggctgatggtgaagtttagaggagaggaggggctggattacggtggtgttgctagggag
tggttatatcttctctgtcatgagatgctaaatccatactacggcctgtttcagtactca
actgataacatctacacactacagatcaacccagattcatccatcaaccctgaccacttg
tcttacttccactttgttgggcggattatgggtctggctgttttccatgggcactacatc
aatggaggcttcaccttgcccttctacaagcagctcctggggaaacccatccagctttgt
gaccttgagactgtggacccagagctgcacaagagcctcgtctggatcctagagaatgac
atcacatctgttttggaccacaccttctgcgtagaacataatgcttttggcaaattcctc
caacatgagctgaaaccaaatggcaagaacatcccagtcacagaggagaacaagaaagaa
tatgtgaggctgtatgtcaactggaggttcatgcgaggcattgaggcccagttcctcgcc
ttgcagaaaggcttcaatgaactcattccacagcatctgctcaagccttttgacaacaag
gaacttgagctgatcatcggtggtttggggaagatcgatctgaacgactggaaggccaac
acgcggcttaagcactgtgtggcagacagtaacatagtgaagtggttctggcaggcggtt
gaatcgtttgacgaagagaggagaggcagactgctacagttcgtcacgggctccacacgc
gttcctttacaaggcttcaaagcactgcaaggttctacaggttctgcaggaccaagactc
ttcactattcatttaattgatgccaacacagacaacctgcccaaagcccacacatgcttc
aaccgaatcgacatcccgccttacgagtcatacgagaagctctacgagaagctcctaacg
gccgtggaggagacgtgtggctttgcagtggagtga
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