Megalobrama amblycephala (Wuchang bream): 125269573
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Entry
125269573 CDS
T08212
Symbol
ranbp2
Name
(RefSeq) RANBP2-like and GRIP domain-containing protein 5/6 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03013
Nucleocytoplasmic transport
mamb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125269573 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125269573 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125269573 (ranbp2)
03110 Chaperones and folding catalysts [BR:
mamb03110
]
125269573 (ranbp2)
04121 Ubiquitin system [BR:
mamb04121
]
125269573 (ranbp2)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125269573 (ranbp2)
Chaperones and folding catalysts [BR:
mamb03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125269573 (ranbp2)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125269573 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_19
TPR_16
TPR_14
TPR_2
TPR_7
TPR_1
TPR_CcmH_CycH
TPR_12
ARM_TT21_C
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
125269573
NCBI-ProteinID:
XP_048048444
LinkDB
All DBs
Position
LG6:838817..870830
Genome browser
AA seq
3083 aa
AA seq
DB search
MRRSKAEVDRYISSVQSASPSQKQKSGKGFLFARLYFEAKEYELAQRHVQEYLSAQPKDP
KAHKFLGQLFEREGETDKAVGCYKRSVDLNPAQSDLVLKVAELLCGKPEPDSRAEFWVEK
AARLLPGHPSVFNLRETLLSTRGQNASNQLYELLQSELRLRPDDTYINLRLVRLYSADGR
HEEALKHCLAVEKTGLLRDRLEWYELLVSTLQECLCQPSVASNEQASRKLHRELLLALCS
RVRLTLTEKSCEESADALWSLDRAMQSLKNTATNTLDGLSEVFTETRAQLYLYAGTLLLK
MAQDGAQQWRAVQDLAALCYLVAYQAPRPKAKSLKSEHASHEPLELLASDRQSQAGHMLL
NLSGDVEQLLKDVVEAFGNRRAPSSLFDLLFSTQTHEQLSFIYNDEMHVVSAHVPSAADL
AKWDSGAVLLHAGDLQHLAWLGLQWALMEQSVSLQHWLKQLFPRLTLETSKLDTNAPESI
CLLDLEVFLCGVVFSSQTQLQETARMASCSSPNQPHQPRCLPLNIIKLLSSSKQREWWDA
VYSLIHKRAQQGTSAKLRLLVQHGLGTLRAGEKHGLQPALLIHWAQHLTDVSERVNSYYD
QKEYAGRSVHYWKVVLPLLEKIRSKRSIPEPLEPMFMHFRSKDIQPSQVRVYEEEATISF
ATLDDIEGNTDEAIAKLEKLNSIVSNWHLAKIYQRLSEEVGNGLEETQGRCTNFLLQFRK
YLTKIYQASPEDLDKLPVSMEEVMDSLNEVNQQLADDGERDEDQVDYPLTSSPGHPTEPH
VKFSTPSPSKSVTSPSKRSVFSPKTPPHWAEDHKSLLQMLCQQVESLKNEVHDLRHNSSD
GTPSSYRMYRDNYTAEGLQEAFPGAQAFHGVPLTVATTGPSVYYNQSPAYNSQYLLRTAA
NVTPTKGPVYGMNRLPPQQHMYAYQQSTHTPPLQSTPACIYPQEQVFGAPIRFESPATSL
LSPYSEEYYGHNVPQPTVNPTLPEPGYFTKPCVVTPTQPSRSSESKPADPKMSFGSQFTG
EPPKVPNFGGVAIAPSTSATTAFKFNSNFKSNDGDFTFSSAQMKNSESLLGLLTSDIPPK
VEGPSEPKHQNQDQPPSQSGVFTFGSKITTGFTFTDAAQSKMSVFGNTDQRFSFASGTKP
VLGNPEAREEKNGESDNDSTHVEEDEDGPHFEPIVPLPDKVDVKTGEEEEEEMFCKRAKL
FRFDSETKEWKERGIGSIKILKHRTSGKVRLLMRREQVLKICANHYITADMALKPNAGSD
KSWVWYAMDYADEMPKTEQLAIRFKTADEAALFKVKFEEAQKFLQESPQGQQLEKKGETP
KPQVSSKEMDLKTLFSKKKGEWDCDTCCVRNAPTSVVCVACNSAAPSTAKDKPVESPLFQ
QLEKKGETPKPQVSSKEVDLKTLFSKKEGEWDCDVCCVRNAPTSVVCVACNSAAPSTAKP
VEQLKGSAPTAPPAKVFSFGLSGDSDKNAISTDVSSKGLAFGSQIPVSFQFGSNDATVTS
VGLAGQSDKKTIQTDAPQPAKVSAAPSFSFGSGFGAQFAKKEGQWDCDSCLVRNDASATE
CVSCKAPCSTGLAAMFGKKAGQWDCDTCLVRNEGTASHCVSCQAANPNMKGKTSTAQSSS
SFNFSFGSSSKQPAATGFTANFNPGPAFQFGTSKDKTSSESFKFEPSTTQADKSSSSSNF
SFSMPAPAGGFKFGITESEAKASDGPSQSGSASDLLKNIAELHREKEKESIPSSSDETVD
SGSHDNNPLITGGPNSFSFADFAKSSQGSFQFGQKDIVELHGEKEKESIPTSSDEPVDSG
SHDDNPLITSKPNSFSFADLAKSSQGSFQFGQKDIVELHGEKEKESIPSSSDEPVDSGSH
DNNPLITGKPNSFSFADLAKSSQGSFQFGQEDPTFKGFAGAGAQLFTGINSSPRPDTSAD
QDDEMYKTEENDDIQFEPVVQMPEKVDLVTGEEDEKILYSQRVKLFRFDTETSQWKERGV
GNLKLLKNNKNGRLRVLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWMANDFSEGDA
KLEQLAAKFKTPELAEEFKIKFEEFQRLLLDIPLQTPHKLVNTGRTAQLIQKAEEMKSGL
KDLKSFLTYQSKDDENSVAGNSTSTVIVKLDSESTGTALEWDNYDLQEEALKNYDNSSVC
DAPSQPDSVAKSLFRFGESSTGFSFSFQPILSPSKSPSKLNQSQASVGTDDEQEASQEEE
RDGQYFEPVVPLPDLIEVSTGEENEQVIFSHRAKLYRYDKELSQWKERGIGDLKILQNYE
TKRVRLVMRRDQVLKLCANHWIDSNMKLEPMKGAEKAWIWSAFDFAEGQGKVEQLAVRFK
LQETASTFKEVFEEAKTAQEKDTLLTPLSARVPAFTQEALCGNAAVALFEETTKERTGLP
EVESSPKQDGTPGAELGAQITKTVVSPPKFVFGSDSVQKIFGSPVSSKEKSPVMIPSPKD
EETSASKLKTSGQAVTGQPSVGTSFSIPTRSLDFRLFKNNPMAFWSCTSATQFEASPRSE
QKSTEDVCDDDVEIIFERKPTREQAELAARLMLPPTFFCYKNDPGYISDDDNDDEDFETA
VRNLKGKLYPDGADGASDHDSECTLLWEKKPTAAEEQRARRLQLPPTFLCGVSSDSEAEA
DRTDDFSSELQKLQLAQVKLKPSHDAAAEEPPADGSRPIDLSTKRSEADSSSTEAGLSFV
FASESAFTFADLAKTSGEFAFGKKDANFTWSNAGATVFGSAPTRNDGEETHNEGEEEGSD
DESPRNEEIHFEPIVSLPEVEVKSGEEDEEILFKERTKLYRWDRELNQWKERGVGDIKIL
FHPVKKCYRVLMRREQVLKVCANHTISKSIELKPMNTSANALVWTATNYSEGDGKVEQLA
AKFKTPELAESFRRAFVDCQSLMSRADCAQMSVAEALSRDTNPVVYFDMGVDGEPAGRIV
MELFAHIVPKTAENFRALCTGEKGFGFHSSVFHRIVPDFMCQGGDITNGDGTGGKSIYGG
KFEDENFDVRHTGPGLLSMANRGRDTNSSQFFITLKKAEHLDFKHVAFGFVKDGMDVVKR
IAELGTKDGKPTKTITITDCGQL
NT seq
9252 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagtaaagcagaagtggatcgatatatttcttcagttcagagcgcctctccc
tctcagaaacagaagtcagggaaagggtttctgtttgccagactctactttgaggctaaa
gaatatgaactcgctcaaaggcatgttcaggagtatttgagcgcacagccgaaggatcct
aaagcacacaagttcctcgggcagctgttcgagcgtgagggtgagacggacaaagctgtg
ggatgttacaagcgttcggtggatctgaatccggctcagtcggacctggttctgaaggtg
gcggagctgctgtgcggcaaaccggagccggacagccgggccgagttctgggtggagaaa
gctgccaggctcctgccgggacatccctccgtcttcaatctgagggagacgcttctgagc
acacgaggacagaatgcctccaaccagctgtacgagctgcttcagtcggagctccggctg
cggcccgacgacacctacatcaacctcaggctggtgcgtctgtacagtgctgacgggcgg
cacgaggaggcgctcaagcactgtctcgcggtggagaagactggccttctgagggaccgt
ctggagtggtacgagcttctggtcagcacccttcaggagtgtctctgccagccgagcgtg
gcgtcgaacgagcaggcgtcacgcaagcttcacagagagctgctgctggcgctctgcagc
cgcgtcagactgacactgacggagaagagctgtgaggagagcgctgatgctctctggagt
ttggaccgtgcgatgcagtctctgaagaacacggccacgaacacgctggacgggctgtcg
gaggtgttcacggagacgagggctcagctgtacctgtacgccgggacgctgctgctgaag
atggcgcaggacggggcgcagcagtggagggctgtgcaggatttagccgctctctgttat
ctcgtggcctatcaggctccgagacccaaagccaagagtttgaaaagtgagcacgcgtcc
catgagcctttggagctgctggcctcggaccgccagagtcaggcgggtcacatgctgttg
aatctgagcggggacgtggagcagctgctgaaggacgtggtggaggcgttcgggaaccgg
cgagcgccgagctctctgttcgacctgctcttcagcacacagacccacgagcagctctcc
ttcatctacaacgacgagatgcatgtggtcagcgcacacgtgcccagcgccgcagatctg
gccaagtgggacagcggtgcggtgctgctgcacgcgggcgatcttcagcacctggcgtgg
ctcggcctgcagtgggcgctgatggagcagagcgtcagcctgcagcactggctcaagcag
ctcttccctcgcctcacgctcgagacctccaaactggacaccaacgcacccgagtccatc
tgcctgctcgacctggaggtgttcttgtgcggcgttgtgttcagcagtcagacgcagctg
caggagacggcacggatggcctcgtgctcctcgcccaatcagccccatcagccccggtgt
ttgcctctgaacatcataaagctcctgtcctcctccaagcagcgcgagtggtgggacgcc
gtctacagtctgatccacaagagagcgcagcaggggacgtcggctaaactgcggctgctg
gttcagcacggtctcggcacgctgcgcgccggtgagaaacacggccttcagccggcgctg
ctcatccactgggctcagcatctcactgacgtgagtgaacgggtgaactcttactatgac
cagaaggagtatgcaggccgcagtgtgcactactggaaagttgtgcttcccttgcttgag
aaaatccgaagcaaacgcagcattcctgaacctctggagccgatgttcatgcactttcgc
agtaaagacatacagccttctcaagtgcgagtatatgaggaagaggccaccataagcttt
gccacacttgatgacatcgagggcaacaccgatgaggccatcgcaaagctggagaagctc
aacagcatcgtgtctaactggcatcttgctaagatctatcagaggctgtcggaggaggtg
ggaaacgggctggaggagacgcagggcaggtgcaccaacttcctcctgcagttcaggaaa
tacctgacgaagatttatcaggccagtccagaggacttggacaagttacctgtatctatg
gaggaagtgatggattcgctgaacgaagtcaaccagcagcttgcagatgatggcgagcgg
gatgaagatcaggtggactatccgctgacgtccagccctggtcatcccacagaaccgcat
gtgaaattctccactccgtccccatccaaaagtgtcacgtctccatccaaaagatctgtg
ttctcacccaaaacgcctcctcattgggccgaggaccataagtccctcctgcagatgttg
tgccagcaggtcgagtccttgaagaatgaggttcatgacctgcggcataactcctctgat
ggtacaccatcctcatataggatgtatcgagataattatactgcagaaggacttcaggaa
gcatttcctggagcacaggcattccatggtgttcctcttaccgttgccactacaggtccc
tctgtgtactacaaccagtctccagcatataattcacagtatcttctacgcactgctgca
aatgttacaccaacaaagggcccagtatacgggatgaatcgtcttcctccacagcagcat
atgtatgcctaccaacaatcaacacacaccccacctcttcagtcaactcccgcatgcata
tatcctcaagagcaggtctttggtgctcccattcgatttgagtcaccggctacatcctta
ctctcaccatacagtgaagagtattacggtcacaatgttcctcaacctacagtcaatcca
acattgccagaacctgggtatttcactaagccatgtgtcgttacacccacgcagccatcc
aggagcagtgaaagcaagcctgctgatcccaagatgagttttgggtcgcagttcacaggt
gaacctcctaaggttccaaactttgggggtgttgccattgccccgtcaacatcagcaaca
actgcattcaagttcaactccaatttcaagtcaaatgatggtgatttcaccttttcctct
gctcagatgaaaaatagtgaaagcctcttgggacttctgacatcagatattcctcccaaa
gtagagggaccatcagaaccaaaacatcagaaccaagaccagccgcctagccaaagtgga
gtctttacttttgggagtaaaattaccacaggatttacattcactgatgctgctcagagc
aaaatgagtgtttttggcaacactgaccaaagatttagctttgcaagtggaaccaaacca
gtattgggaaatccagaggctcgggaagagaaaaatggggaaagtgataatgacagcacc
catgtggaggaggatgaggatggccctcattttgagcccattgtgcctcttcctgataag
gttgatgtgaaaactggtgaggaggaggaagaggagatgttctgcaagagagcaaaactc
ttccggtttgactctgagactaaagaatggaaagagaggggaattggaagtatcaaaatt
ctaaaacacagaacatctgggaaagttcgtctgttgatgaggagggaacaggttctcaaa
atctgtgctaatcactatatcactgcagatatggccctcaaaccaaatgctggatctgac
aagtcttgggtgtggtatgcaatggactatgcagatgaaatgccgaagactgagcagttg
gccattcgttttaaaactgcggacgaagctgcactgtttaaagtcaaatttgaggaggct
caaaaattccttcaagagtccccacaaggccaacagttggaaaagaaaggtgaaactcca
aagcctcaagtttcatccaaagaaatggatcttaaaacactgttttccaagaagaagggt
gaatgggactgtgacacttgctgtgtaagaaacgctcccacatctgtggtatgcgttgcc
tgcaacagtgcagctccttccacagcgaaggacaaacctgtagagtccccactcttccaa
cagttggaaaagaaaggtgaaactccaaagcctcaggtttcatccaaagaagtggatctt
aaaacactgttttccaagaaagagggtgaatgggactgcgatgtgtgctgtgtacgaaat
gctcccacatctgtggtatgcgttgcctgcaacagtgcagctccttctacagcaaaacct
gtagagcaactcaaaggctctgcgcccacggctcctcctgctaaagtgttttcttttggg
ctctctggagattctgataagaatgccatcagcactgatgtcagctcaaagggcttagca
tttgggtctcaaataccagtttcttttcagtttggatcaaatgatgctacagtaacatct
gttggccttgcaggtcagtctgataagaaaactattcagactgatgcaccacaacctgcg
aaagtgtcagcagctccatcattctcctttggctctggatttggcgctcaattcgccaag
aaagagggtcagtgggactgtgactcctgcttagtgaggaatgatgcttcagcaactgaa
tgtgtttcttgcaaagccccctgcagcactggattagctgccatgtttggtaaaaaagca
ggacagtgggattgtgacacttgcctggtaagaaatgaaggtacagctagccactgtgtc
tcttgtcaggcagcaaacccaaatatgaaaggcaagacctctactgcacaatcaagttcc
tcatttaacttcagttttggtagttctagcaagcaacctgctgcaacaggatttacagcc
aatttcaatccaggtcctgcttttcagtttggtacaagtaaggataaaacatcctcagaa
agtttcaagtttgagccctctacaactcaggctgataagtcatcaagcagttcaaatttt
tcattctccatgccagcgcctgctggtggtttcaagtttggcattacagaatctgaggca
aaagcatcagatggaccgtcacaaagtgggtctgcttctgacctcctcaaaaatattgct
gagcttcacagagagaaggaaaaagagtcaattccaagttcctcagatgagactgtagac
tctggtagtcacgataataatcccctcattaccggtgggcctaactcttttagttttgct
gactttgcaaagtcctcacaaggtagttttcagtttggccagaaggatattgttgaactt
cacggagagaaggaaaaagagtcaattccaacttcctcagatgagcctgtagactctggt
agtcacgatgataatcccctcattaccagtaagcctaactcctttagttttgcagacttg
gccaagtcctcacaaggtagttttcagtttggccagaaggatatagtagaacttcacgga
gagaaggaaaaagagtcaattccaagttcctcagatgagcctgtagactctggtagtcac
gataataatcccctcattactggtaagcctaactccttcagttttgcagacttggccaag
tcctcacaaggtagttttcagtttggccaggaggaccccactttcaaaggctttgcaggg
gctggtgcacagctctttacaggaattaattccagccccaggccagacacctctgccgat
caagatgatgaaatgtacaaaacagaggagaatgacgatattcagtttgagccggttgtt
cagatgcctgagaaggttgaccttgttacaggggaagaagatgagaaaatcttgtattca
cagcgtgtcaaactcttcagatttgatacggaaacaagccaatggaaagaaagaggagtt
ggcaaccttaaactgcttaaaaataataagaatgggagacttcgagttcttatgaggaga
gagcaggtgttgaaggtatgtgctaatcattggatcacaaccacaatgaatttaaagccc
ctctctgggtcagatcgtgcctggatgtggatggccaatgacttttcagaaggagatgcc
aaattagaacagcttgcggcaaaattcaaaacaccagagcttgcagaagagttcaagata
aaattcgaggagtttcagcggctgctattggatattcctttacagacccctcacaagctt
gtgaatactggcagaacagcccaacttatacagaaagctgaagaaatgaaatctggtctt
aaagacctcaaatcattcttgacttaccaaagcaaggatgatgaaaatagcgtagcaggt
aacagtacctctacagtcatagtcaagctcgactctgaaagcaccggaactgctttagaa
tgggataattacgatttgcaagaggaagcgctcaagaactatgataattcctctgtgtgc
gatgccccttcgcagcctgattcagtagcaaagagtttgttccgttttggcgaatcgtcc
acaggctttagtttcagttttcagcctattctcagtccctccaagtctccatctaagcta
aaccagagccaggcttctgttggcacagatgatgaacaagaagcatcgcaagaggaagag
cgagatggtcagtactttgagcctgttgtgccattgcctgatcttatcgaggtctcaacg
ggggaagagaacgaacaagtcattttcagtcaccgggccaaactataccgctatgataaa
gaacttagtcagtggaaggaacgaggtataggagaccttaaaatactacaaaactatgaa
acgaaacgtgtcagacttgtgatgagacgggaccaggtcctcaaactgtgtgcaaaccat
tggattgattcaaatatgaagcttgagcccatgaaaggagctgagaaagcgtggatctgg
agtgccttcgattttgccgaagggcagggcaaggttgaacagttggctgtacgattcaaa
cttcaggaaacggcaagtactttcaaagaggtcttcgaagaggcaaagaccgcccaggaa
aaagacactcttctcaccccactttccgcaagagtacctgctttcacccaagaggcactc
tgtggtaatgctgcagttgctttatttgaggaaacaacaaaagaacgtactggacttcct
gaggttgaaagcagtcctaaacaggatggtacacctggggcagagcttggtgctcaaatt
accaagactgtggtctctcctcccaagtttgtctttgggtcagactctgtgcagaagatc
tttgggagccctgtgtcatcaaaagagaaatctcctgttatgattcccagtccaaaagat
gaggaaacgagtgcctcaaaactgaaaacctctggacaggcagtgaccggtcagccatcc
gttgggacttctttcagcattccaacaagaagtttggattttaggcttttcaaaaataat
ccaatggcattttggagctgcacatcagccacccagtttgaagcttcgcctcggtcagaa
cagaagagcactgaggacgtgtgcgatgatgacgttgagattatatttgagcgaaagcca
acaagagagcaagcagaactggccgctcgactgatgcttcctcctacgttcttctgttac
aaaaatgacccaggatacatcagcgatgatgacaatgatgatgaagattttgaaaccgca
gtgagaaatctgaaaggaaagctgtatccggacggagctgatggggcgtcggatcatgac
tctgagtgcacactactgtgggagaagaagccgactgcagccgaggagcagagagcccga
cgcctgcagctgccgcccaccttcctgtgcggcgtcagcagcgactccgaggccgaggcc
gatcggacggacgacttcagctccgagctccagaaactacagctcgcacaggtgaagctg
aagccttcccatgatgctgcagcagaagagcctcccgcggacggcagccggcccattgac
ctctccacaaagaggagcgaggccgactccagctccaccgaagcaggtctttcttttgtg
tttgcatctgagagtgcgtttacgtttgcagacttggcaaagacttcaggagaattcgct
tttggcaaaaaggatgctaattttacgtggtcaaacgccggagccacagtctttggaagt
gcaccaacacgaaatgatggagaggaaacacacaatgaaggagaagaggagggcagcgat
gacgaatcgccccgtaatgaggagatccactttgagccgatcgtgtccttgccagaggtg
gaggtgaagtctggcgaggaggacgaggagatcctgttcaaagaaaggaccaaactctac
cgctgggaccgcgagctcaaccagtggaaggagcgtggcgtgggagacatcaagatcctc
ttccaccccgtcaagaagtgctaccgtgtgctgatgagacgcgagcaggtgctgaaagtc
tgtgccaaccacaccatcagcaagagcattgagctcaagcccatgaacacctcggccaac
gcgctggtgtggaccgccaccaactactcagagggagacgggaaggtcgagcagctcgcg
gccaagttcaagactccagagctggccgagtccttcagacgagcgttcgtcgactgccag
agcctcatgtcgcgggccgactgcgctcagatgtccgtggccgaggcgctttcacgagac
accaaccccgtggtgtacttcgacatgggggtcgacggcgagcctgctgggagaatcgtc
atggagctgttcgctcacatcgttcccaaaaccgcagagaacttccgggctctgtgcacg
ggcgagaagggcttcggtttccacagctccgtcttccacaggatcgtccctgacttcatg
tgtcagggcggcgatatcaccaacggggacggcactggaggaaaatccatctacggaggg
aagtttgaggacgagaacttcgacgtgaggcacacgggcccgggcctgctgtccatggcc
aaccgcggcagagacaccaacagctcgcagttcttcatcaccctcaagaaagcagagcac
ttggacttcaagcacgtggctttcggcttcgtcaaagatggcatggatgtggtgaagagg
atagcagagctgggcactaaggacggtaaacccactaagaccataaccatcacagactgt
ggacagctgtaa
DBGET
integrated database retrieval system
