KEGG   Megalobrama amblycephala (Wuchang bream): 125269981
Entry
125269981         CDS       T08212                                 
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04382  Cornified envelope formation
mamb04510  Focal adhesion
mamb04512  ECM-receptor interaction
mamb04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125269981 (col4a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125269981 (col4a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125269981 (col4a2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    125269981 (col4a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mamb04147]
    125269981 (col4a2)
   00536 Glycosaminoglycan binding proteins [BR:mamb00536]
    125269981 (col4a2)
Exosome [BR:mamb04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   125269981 (col4a2)
Glycosaminoglycan binding proteins [BR:mamb00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   125269981 (col4a2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 125269981
NCBI-ProteinID: XP_048049073
LinkDB
Position
LG6:complement(15839648..15962707)
AA seq 1669 aa
MEGEKHLQHWNTLRCFLLCLAVLVLTTEVNAGVKKSSGPCGGRDCSGGCQCYPEKGARGS
PGPLGPQGPTGPNGRQGDPGLQGPKGEKGDHGKGGTMGLKGSVGMQGVPGFDGADGIPGH
PGPSGPRGKPGADGCNGTRGESGIPGFSGINGGPGIPGWPGMKGEKGDPLDLWVYMERFR
GDPGPPGYQGFIGPTGNPGYSGPPGLQGPWGPTGSKGVKGQKGETTKRIKGIKGEAGDIG
EPGLPGLFPLIRPIPTEWQGKKGVKGYKGQKGDLAYVSTKGETGVSGPPGQRGNPGNNVW
KGPKGDTGLPGFPGNHGRKGDRGEPGELIGSPNDQTGAGPPGPPGERGPIGNYGSKGAKG
LPGPPGPPASEQQQEILWGPEGPRGPKGGKGEAGEPGNPATQPGPPGADGLPGFQGPPGP
KGSLEDFFKGAAGPRGRPGNAGKKGPKGDHGLCECLEKSPSGPPGPPGEAGNPGMAGEWG
QQGDQGDPGPKGVDGFIGFPGTKGSFGLKGRKGEMGIATQKGLPGDPGNPGQSGFPGEQG
RPGFSGKDGEPGFRGSPGEGPVGEPGEKGYPGPPGPPGLIGPTGQPGQVLGATKGVRGLP
GDDGQIGRDGEKGLPGAPGACSSREDQWNIEVECIGDPGPPGETGQPGLPGLEGFPGIPG
AKGVQGLSGEPGAEGERGEPGRGGPPGPRGFVGPRGDLGYPGTKGVQGDLGISGKPGLDG
ALGEKGDHGEVLGASSGAPGEPGRPGERGVIGLPGDPGPKGHPGMDGMPGIIGVKGEIGP
PGLRGEVGKPGPQGTFGFPGQPGYTGPPGPPGKTGEPGPSGVRGDQGDPGLSGPRGVKGA
IGDPGNIGVPGNTGPPGDPGQPGPFGFGGHPGLKGSKGGQGMTGFPGKFGEKGLKGLSGK
KGQIGLPGQQGVKGAPGPPGEKGERGLVGPPGEKPIIHISPQEKEVMKGAKGDHGNMGDP
GFTGQRGTKGAPGYPGGDGKDGHPGKPSDTKGTKGLPGEEGESGPKGMPGPTGLPGIDGF
PGMAGPRGDKGSPGAYGRTGESGIKGIKGELGPTISLPGSTGLRGETGLSGPSGEKGLIG
QSGDRGGPGFDGIVGMKGQPGEPGKDGPPGSDGQQGFPGNQGHKGWPGEPGQKGTPGIQG
QPGQKGFPGLKGIFGLDGLKGQKGTQGVPGTDNWGPPGEPGARGEIGETGIPSTETGIPG
NLGLKGFTGEPGDKGESGRPGVRGPPGPDGFSDIPGVPGDYGFPGTKGLPGFPGPRGIPG
EPSPFGAKGEKGNLGDFGFIGEKGVHGDRGEKGQSGEPGVSGRKGERGDPGMMGIPGRRG
FEGNRGPVGPKGDTGPPGFPGSPGAKGLPPVPQKIPGERGQPGPMGIQGPNGRNGNPGPA
GPPGDAGVLGPKGHKGMPGLPGIPGNPGFRGEPGQMGHPGLQGEEGARGRSGLPGPIGMA
GRSVNVGYLLVKHSQSEQIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLPRFN
TMPFLYCNPGDICYYASRNDKSYWLSTTAPIPMMPVEEAEIKPYISRCSVCEAPSVAIAI
HSQDITIPQCPFGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECNGAK
GTCHYFANKQSFWLTSIDQTFQSSPVSETLKAGQLLSRISRCQVCMKNL
NT seq 5010 nt   +upstreamnt  +downstreamnt
atggagggtgagaaacatctacagcattggaacacattaaggtgttttctgttgtgcctt
gcagtccttgtccttacgacagaggtcaatgcaggagtgaagaagagcagtggaccatgt
ggagggagagactgcagcggaggctgtcagtgttatcctgagaagggtgcgaggggatcg
cctggaccccttggtccccagggccccacaggccctaacggacgacagggtgaccctggt
ctccagggccctaaaggagagaagggagaccatggcaaaggaggcactatgggtctaaaa
ggaagtgtgggaatgcaaggggttccagggtttgatggagcagatggtattccaggccac
cctgggccatctgggcctcgtggaaaaccaggagctgatggctgtaatggaacccgggga
gaatcaggaattccaggcttttcagggatcaatggtggacctggaataccaggttggcca
ggaatgaagggggagaagggtgaccctttggatctgtgggtctatatggaaagattcagg
ggagatccagggccaccaggttatcaaggatttattggtccaactggtaacccagggtac
agtgggccaccaggattacaaggaccttggggtcctactggtagtaaaggtgttaaaggt
caaaagggtgaaaccactaaaagaataaaaggaatcaaaggagaagcgggggacatcgga
gagccaggactaccaggacttttcccgctcataagaccaatccctacagaatggcagggt
aaaaaaggggtgaagggttataaaggtcaaaaaggagatttggcatatgtatctacgaaa
ggagagactggtgtgtcagggcctccaggacaacggggaaacccaggaaataatgtctgg
aaaggacctaagggtgacactggactaccaggtttcccaggaaatcatggccgcaaggga
gacagaggagagcctggagagctgataggaagtccaaatgatcagactggagcaggtcct
ccagggcctccaggggagcgtggcccaattggaaattatggttctaagggtgctaaagga
ctgccaggtcccccaggaccccctgcctctgaacaacaacaagagattctgtggggccca
gagggaccaaggggaccaaagggaggcaaaggtgaagctggagaacctggtaatcctgcc
actcaacctgggccgcctggcgccgatgggctgcctggatttcagggaccacctggaccc
aagggatcattggaagatttcttcaaaggcgccgccggaccacgtggacgtccagggaat
gcaggaaaaaaaggaccaaagggtgaccatggtctgtgtgaatgccttgaaaaatcccct
tctggccctccgggccctcctggtgaagctgggaaccctggaatggctggcgagtggggt
cagcagggtgatcagggagacccaggacccaaaggtgtcgatggttttattggttttcct
ggtacaaaaggatcatttggactcaaaggcagaaaaggagagatgggaatagctacacag
aaaggattacctggtgacccagggaacccaggtcagagtggtttcccaggagagcaagga
aggcctgggtttagtggaaaagacggtgaaccaggttttagaggatctcctggagaaggt
cctgtaggtgagcctggagagaagggatacccaggtcctccaggtcccccaggtctaata
ggccccacaggacaacctggccaagttcttggagcaactaaaggtgtaaggggccttcca
ggagatgatgggcaaattggtcgtgatggagaaaaaggtttgcctggtgccccaggagcc
tgtagctcaagagaagatcaatggaatattgaagtggagtgtattggagatcccgggcca
cctggagagacagggcagcctggacttccagggttggaaggatttcctggaataccaggt
gccaaaggtgtacaaggtctttctggagaacctggggccgaaggagagcgaggtgaacca
ggaagaggaggcccacctgggccaaggggttttgttggacctcggggagatttaggatat
cctggcaccaaaggtgtgcaaggagatctgggcatctctggtaaaccaggtttggatggt
gctttaggggaaaagggtgatcatggtgaagttttaggagcatcttctggagccccagga
gaaccaggacggccaggagagaggggtgtcattggccttccaggagacccaggcccaaaa
ggacacccaggtatggatggtatgccaggtattatcggcgtcaagggtgaaattggccct
ccaggtcttcgaggagaggtaggaaaacctggaccgcaaggaacgttcggctttcctggc
cagcccggttacacaggacctcctggaccacccggaaaaactggagaaccaggtccaagt
ggagtaaggggagatcagggagacccaggtctttctggacccagaggagtaaagggtgcc
attggagaccctggaaatattggtgtaccaggaaatactgggcccccaggagatccagga
caaccggggccgtttgggtttggtggtcacccagggttaaaaggttccaaaggtggtcag
ggcatgacaggttttcctggaaagtttggtgagaaaggtttgaaaggactttcaggaaag
aaaggacagataggcttaccaggacaacaaggtgtaaaaggagctcctggccctccaggt
gaaaaaggtgaaagagggctggtgggacctccaggtgaaaagccaatcatacatatatca
ccacaagaaaaagaggtcatgaagggagctaaaggtgaccatggaaatatgggagatcct
ggcttcactggtcaaagaggtacaaaaggtgccccaggttatccaggaggtgatgggaaa
gatggacatccaggtaagcctagtgacacaaaaggtactaaaggtcttcccggagaagaa
ggtgaatcggggcctaagggaatgccagggcctacaggactccctggaattgatggtttc
cctggaatggctggacccaggggtgacaaaggctcgcctggtgcctatggacggaccgga
gaatctggaatcaaaggaataaaaggtgaactgggtcccaccatcagtcttccagggtca
acaggactgagaggtgaaactgggctgtctggaccttcaggtgagaagggactcataggt
caatctggagatagaggaggtcctggttttgatggcattgtagggatgaaaggccaaccg
ggtgaaccaggaaaagatggaccaccaggctctgacggccagcagggtttcccaggaaac
cagggtcataagggctggccaggagagcctgggcagaaaggaacacctggaatccaaggc
caaccgggacaaaaaggatttcctggtcttaaaggcatttttggtttggatggcctgaaa
ggtcaaaagggtacccaaggtgttccaggtactgacaactggggtcctccaggtgaacca
ggagcaagaggagagataggagagaccggtatcccgagcacagagactggcatccctgga
aatctgggccttaagggtttcactggagagccaggtgataagggtgaatctgggcgtcca
ggtgtacgaggtcctccaggcccagatggattctctgatataccaggagtgccaggcgac
tatggttttccaggcactaaaggacttccaggttttcctggtcccagagggattccaggt
gaaccatctccatttggagcaaaaggagagaaaggaaatttaggtgatttcggattcatc
ggagaaaaaggagtccatggagacagaggagaaaaaggacagtcaggggaacctggagta
tcaggaagaaaaggtgaaagaggagacccgggaatgatgggaattccaggaagacgtggt
tttgaaggcaacaggggccctgttggacctaaaggagatactggacccccaggtttcccc
ggctcacctggcgctaaaggacttccacccgttccacagaaaattccaggggagagagga
caacctggcccgatgggtattcaaggaccaaatggacgcaatggaaatccaggtcctgct
ggacctcctggtgatgcaggggttttgggtccaaagggacacaagggcatgccaggtctc
cctggaataccaggaaatccaggcttccgtggagaacctggacaaatgggccaccctggt
ctgcaaggcgaagaaggggcccgaggacgctctggtttaccgggtcctattggaatggct
ggccgcagtgtcaatgttggctaccttctggtgaagcacagtcagtctgagcagattccc
atgtgccctgtgggcatgtccaagctatgggacggttatagccttctgtactttgaggga
caggagaaggcccacaaccaagacctgggtctagccggctcatgtctcccccgttttaac
accatgcccttcctgtactgcaatccgggggacatatgctactatgccagccgcaatgac
aaatcctattggctgtccaccactgcaccaattcccatgatgcctgtggaggaggctgag
ataaaaccatacatcagccgttgttccgtgtgtgaagcaccatctgtggccatcgccata
cacagtcaagatataactatcccacaatgcccattcggatggagaagtctctggattggc
tattccttccttatgcacacggcagctggagatgaaggtggcggtcagtctctggtgtct
ccaggctcttgtctagaagatttccgcaccactcccttcatcgagtgtaacggggccaag
ggtacatgtcactacttcgccaacaagcagagtttctggttgacctctatcgatcagacc
ttccagagttcccctgtctctgagacactcaaagccgggcagctcctgtcacgcatcagc
cgctgccaagtgtgtatgaagaacttgtga

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