Megalobrama amblycephala (Wuchang bream): 125270207
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Entry
125270207 CDS
T08212
Symbol
clasp1a
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1a
KO
K16578
CLIP-associating protein 1/2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125270207 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125270207 (clasp1a)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125270207 (clasp1a)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
125270207 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
Vac14_Fab1_bd
HEAT_DAAF5
ParcG
Paxt-1_C
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
125270207
NCBI-ProteinID:
XP_048049510
LinkDB
All DBs
Position
LG6:25129656..25211688
Genome browser
AA seq
1574 aa
AA seq
DB search
MEPNMEYCLTQVLQKDVARRLQMGPELIDYITDSDKCHDLESDQTALDKMVDGIATSWVN
SSNFKLALLGMDLLSALVTRLQDRFRPQVGTVLPSLIDRLGDAKDQVRDQDQTLLLKIME
QSATPQYIWDRMLGGFKHKNNRTREGVCLCLISTLNTYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMNCLVEIYRHVGEKVRIDLSKKGLPQSRLNVIFSRFDEVQRSGNMILSSGSDK
NFDDEDSVDGGRSSSSSSSKGFSSSRRGGSMGSMRRPSSASGSRAAGKDSVSAGAVDEED
FVKAFEDVPAVQIYSSKDLEDSLNKIREVLSDDKQDWEHRVTALKKVRSLVLAGATEHEG
FLQHLRLLEGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNS
AKIMATSGMAAIRLILRHTHFPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTHSLE
RHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLK
SSDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGPVTRSKVIGSRVSSTPGALQRSRSDI
DVNAASSAKSRMSTATSPSPFSSAAALPPGSYASLDGAPGKIDGRVRTRRQSSGSAVSTS
STVTDSRGRSRAKXVSQSQPGSRSSSPGKLLGHAYGRIPRATAPTTPSDKYSRVPRSQGC
SRETSPSRLGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLASRRHSRSTSALS
TAEPVGQSDRFGLIHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPLRRRYE
SDDDANSDASSACSERSYSSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNL
LKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITVHREDLQDWLFVLLTQ
LLKKMGADLLGSVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYI
ESLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLL
GALPKTFQDGATKLLHNHLKNSSNTSSVSSPSNTMGRTPPRHPTSRTSPLTSPTNCSHGG
LSPSRLWGWSVDGLLKHPSPSPPPPTPPSHSSIPAGPSLRAFRCALSPSMLEYDTENMNS
DEIFSSLRGVTEAIQSFSYRSQEDLNEPIRRDGKKDDATGKEGASPGSDARLGLDVVEGG
RTALDNKTSLLNTPSPRSFAVPRSREFAPYGYGDTITAYDKSALKEAVFDDDVEQFRDCR
RQDCGENKMVLPKGFTPDLVADLLKELSNHNERVEERKGALIELLKIAREDSLAVWDEHF
KTILLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVV
RAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVVERIAKESLHQLLPD
IIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTT
NSNSSSSSDVSSHS
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atggaacccaatatggagtactgtctgacccaggtgctacagaaggatgtggcccgcagg
ttgcagatgggtccggagctcatcgactacatcacagattcagacaagtgtcatgacctg
gagagtgaccagactgcgctagataaaatggtggacggtatcgccacatcttgggttaac
tctagcaacttcaagttggctttgttgggaatggacctactatctgccttagtgacaaga
ttacaggaccgatttcgtccccaagttggtacagttttacccagcttgatagatcggtta
ggcgatgccaaagatcaagtcagagaccaagatcaaaccctgctgctgaagatcatggag
cagtcagctactcctcagtacatatgggacagaatgttggggggtttcaaacacaaaaac
aaccggaccagagagggagtctgtctctgtctcatttcaactctgaacacatacggtgcc
caaggcttgactctgagcaaaattgtaccacatatatgtaatctactcggagaccctaca
agtcaggttcgggatgcggccatgaactgccttgtggaaatatacagacatgttggagag
aaggttaggattgaccttagcaaaaaaggactgccgcaatcaaggttgaatgtaattttc
agcagatttgatgaagtccaaagatctgggaacatgatcctctcctcaggttcagataag
aactttgatgacgaagattctgtggatgggggcaggtcctcctcctcttcctcttctaag
ggcttctccagcagcaggagagggggcagcatgggctcaatgagacgacccagttctgcg
tctggatccagggctgcagggaaggacagtgtcagcgcgggagctgtggatgaagaagat
tttgtcaaagcttttgaagatgtacctgcagtgcaaatatattccagtaaggatttggag
gattccttgaataagatccgagaagttttatcagatgacaagcaagactgggagcaccgc
gtcactgctctgaagaaagtgcggtcacttgttctggctggtgcgactgagcatgagggt
ttccttcaacatctacggcttttagaaggtgccttcaagctgtcggctaaagatcttcgg
tcccaagtggttcgagaggcctgtatcacattagggcatctgtcttcagtgttggggaat
aaatttgatcacggggctgaaagcatcatgcctacgctgctcaacttagtgcccaacagc
gccaaaattatggccacatctggaatggcagccatccgcctcatcttgcgacatacacac
ttcccacgccttatcccgatcatcaccagcaactgcacttctaaatctgtggctgttcga
agacggtgttatgagtttttagacctgttattgcaagaatggcagacacactctctagag
aggcatgtggcggttctcactgagaccatcaagaaggggatccatgatgctgactcagag
gcaagatctgtggccagaaagtgttactggggattccatggccattacagtcgggaagca
gagcacctgtttcaggcgttggagtcgacctatcagaaggccctacagtcccacctgaag
agttctgacagtatagtgtctctaccgcagtccgaccgctcctcctcaagctcacaggag
agcctcaatcgaccgctgtcagtgaagagtgtcattggaggcccagttacaagaagtaaa
gtgatcggctctagggtgtcctcaacccctggtgccctccagcgttctcgcagtgacata
gacgtgaatgccgcctccagtgccaaatctcgcatgtccaccgcaacctccccatctccc
ttcagctctgctgcagccttgcctccaggctcctatgcctccttggacggtgcacctggt
aaaatagatggtcgtgtgcggacgagaaggcagagctcagggagtgcagtcagcaccagt
agcactgtgacagacagccgtggtcgaagcagagctaaangtgtgtctcagtcccagccc
ggcagccgatccagctctccagggaagctcttgggacacgcatatggcagaattcctaga
gccactgccccaacaacaccctcagacaagtactctagggtcccacgaagccaggggtgc
agccgtgaaaccagccccagcagactgggcctagcccggagcagtcgcatcccccgcccc
agcatgagtcaggggtgcagccgtgacactagtcgcgagagcagccgtgacaccagcccc
gctcggggcttcactcctcttgcctcccgacgtcactctcgctcaaccagcgcgctgtcc
acggccgaacccgtgggccagtcagatcgctttggcctgatccatcaggctcgcatttct
gcatctgtcaatgctatgagagtactgaacactggcacagaagtggaggctgccgtagct
gatgctttgctgttaggggactccaggaataagcgcaagcctttgagaaggaggtacgaa
tctgatgacgatgccaacagtgatgcgtccagtgcctgctcagagcgttcctatagctct
cgcaatggaggcattcctcactacctgcgtcagacggaggatgttgccgaggtgctaaat
cactgcgccagttccaactggtctgagaggaaagagggcctgctgggattgcagaacttg
ctaaagagtcagcgtattctcagccgtgtggagctgaagaggctgtgtgagatcttcacc
aggatgtttgcagatcctcacagcaagagagtgtttagtatgttcttggagacactagtg
gacttcatcactgtgcacagagaggatctccaggactggctctttgtactgctcactcag
ctactgaagaaaatgggagctgacctcttgggctcagtccaagctaaggtccaaaaggct
ctggacatcacacgggagtctttccccttcgaccaacagtttaacattctaatgagattc
attgttgatcagactcaaacccccaatctgaaggtgaaggtggccatcctgaaatacatt
gagtccctggcacggcagatggaccctgctgactttgtgaactcaagtgagacgagatta
gccgtgtctcgcattatcacctggaccacagaacccaagagctctgacgttagaaaagcg
gcccaggtggtgctgatctcactctttgagctgaacactcctgagttcaccatgcttctg
ggcgctctgcctaaaacattccaggatggagccaccaagctcctgcataaccatctgaag
aactcaagcaacaccagcagcgtgagttcaccaagtaatacaatgggccgcacgccaccc
cggcaccccaccagcaggaccagtcctctcacctcacctacaaattgctcccacgggggt
ctgtcacccagtcggttatggggttggagtgtcgatgggctcttaaagcacccctctccc
tctcctcctcctcctactcctccgtctcactcctctattcctgctggcccctccctcagg
gccttccgctgcgcactctcaccaagtatgctggagtatgacacagagaacatgaattct
gatgagatctttagctcactgcgtggtgtcacagaagccatccagagtttcagttaccgc
agccaagaagacctgaatgagccaatcagacgtgatgggaagaaggatgatgccactggg
aaggaaggggcatctccagggtctgacgcaagactgggattggatgtagtggagggtggc
cgaaccgctttggataacaaaacatctttgctcaacacaccatccccgcggtctttcgct
gtgccacggtcgagagagtttgcaccctatggctatggagacacaatcacggcctatgac
aaaagtgccctgaaagaggctgtctttgacgacgacgtggagcagttccgagactgccgt
cgacaagactgtggtgagaacaagatggtgctacccaagggctttactcctgatttggtg
gcagacctgctgaaggagctgtctaatcacaacgagcgagtggaggagaggaagggggcg
ttgatcgagctgctgaagatcgcccgtgaagacagcctggctgtgtgggacgagcacttc
aaaacaatcctattgctgctattggagacactgggggacaaagatcacactatccgagca
ctggctttacgggttctgaaggagatcctgaggaaccagccagcgcgtttcaagaactat
gcagaactcaccatcatgaaaacactagaagcccacaaggactctcataaagaggtggtt
agggcggctgaagaggctgcatctacattggccggctccattcacccagagcaatgcatc
aaggtgctgtgtcccattgtacagaccgcagactaccccatcaacctggctgctattaag
atgcagaccaaagtggttgagcgcattgccaaggagtccctgcatcagctgctgccagac
atcatccctggcctcttacaaggctatgataacacagagagtagcgttcgcaaggccagc
gtgttctgtctggtggccatctactctgtgattggtgaggagctgaagccacacttggcc
cagctcacgggtagcaagatgaagttgctaaatctgtatattaagagggcccagaccacc
aacagcaacagcagcagttcttcagatgtgtcctctcacagctag
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integrated database retrieval system
