Megalobrama amblycephala (Wuchang bream): 125270312
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Entry
125270312 CDS
T08212
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
125270312
NCBI-ProteinID:
XP_048049709
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Position
LG6:29216221..29251668
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AA seq
717 aa
AA seq
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MAMAAFLIVFVQLALLPSAFGGAYYGHKPHPQQHQPLPQMPHMGMGKDMPHMPYPHYRKD
LPMHLNKGKDTKAMNKGETIPRGEQGVQGETGPQGPPGPPGPQGPPGPQGNGMQGPPGKP
GPPGPPGFPGVGKPGMPGMPGKPGGIGQPGQQGEQGPRGEEGQPGMTGPPGPPGPPGLPG
IGKPGGQGLPGQPGGKGDPGHKGFPGLPGLPGPKGDRGIGQPGPLGPKGPAGPPGLPGQA
GLPGVGKPGLPGIQGPPGIPGKPGQPGEPGPEGPPGGQGLQGPQGAPGIGSPGERGLPGQ
PGAPGHKGLQGPPGLPGKPGLPGFGKPGYPGPKGDKGMGGLPGPQGPKGDKGYGGQPGMT
GPPGQTGPPGPPGPMGAPGGIGSPGLKGEGGAEGAKGDPGPMGQPGPPGFPGQPGLQGED
GEPGPRGPPGPTGPKGEAGINGLPGSPGPSGLPGLKGELGQPGPEGPQGPKGIPGLAGPG
GPIGPSGLPGPKGEVGPPGQAGPPGEGSPGIPGPVGPAGPPGPNGNPGQPGIPGPPGPPG
PPGPPPSPDLMGVLPEMGPALDGMKTGGYKKGKYAGGGDMMGANGLEMPAFTAQLTTPFP
PVGTPIVLDKLLYNGRQNYNPQTGVFTCDLPGIYYFAYHVHCKGANVWVGLYRNGQPLMY
TYDEYKKGFLDQASGSAVIPLQPGDTVYLQLPSDQAAGFYAGQYVHSSFSGFLLYPM
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggccatggctgctttcctaatagtttttgtgcaattggctctactgccatcagctttt
gggggtgcatattatggacataagccacatcctcaacagcaccaacccttaccacagatg
cctcacatgggcatgggaaaggatatgccacacatgccatatccacactacagaaaagac
ttaccaatgcacctaaacaaaggcaaagataccaaagctatgaacaaaggtgagaccatt
cccagaggtgagcagggtgttcagggagagactggaccccaagggccccctggtccacct
gggccccaaggtcctcctgggcctcaaggtaatggtatgcaaggccctcctggaaagcca
ggacctcctggtcctccaggatttcctggagttggtaagccaggaatgccaggtatgcct
gggaagccaggaggtattgggcagcctggacagcaaggtgaacagggacccagaggtgaa
gagggacaaccaggaatgactgggccacccggcccccctggacccccaggactgccagga
ataggaaagcctggtggacaaggattaccaggacagccagggggtaaaggagatccagga
cataaaggttttcctggtctcccaggtttacctgggcctaaaggcgacagaggaattgga
caacctggcccactagggcccaaagggccagctgggccacctggactcccagggcaggca
ggattacctggtgtgggtaagcctggtcttcctggtatacaaggtccacctggtattcca
gggaaacctggacagcctggggagccaggtccagagggtccacctggtggacagggccta
caaggaccacaaggggcccctggtattggaagtccaggagaaaggggattaccaggccag
ccaggggcacctggccacaaaggattacaaggaccaccagggttacctgggaaacctgga
ttacctggatttggcaaacctggataccctggcccaaagggtgacaaagggatgggaggg
cttcctggtcctcaaggaccaaaaggagacaaaggttatggtggtcaaccaggcatgacg
ggtccacctggtcaaactggtcctccaggccctcctggaccaatgggggcaccaggtgga
attggttccccagggctaaaaggagaaggaggtgcagaaggagccaagggagatccaggg
cctatggggcaaccaggtcctccaggatttcctggccaaccgggcctccaaggtgaagat
ggagaacctgggccaagaggaccaccaggacccacaggtcccaaaggagaagcaggaatc
aatggtctacctggttccccaggtccatctggcctgcctggtcttaaaggagaacttggc
cagcctggcccagaaggaccacagggtcctaaaggcattccaggacttgcagggccagga
ggaccaattgggccttctggacttcccgggccaaagggagaagttggtccaccaggtcaa
gctggcccacccggtgaagggagccccggaatccctggtcctgttggtcctgcaggtcca
cctggcccaaatggaaatccaggtcagccaggaatcccaggtccaccgggacctcctgga
cccccaggcccccctccttcccctgacctgatgggtgttcttcctgagatgggccctgcc
ctagatggtatgaaaactggtgggtacaagaaagggaagtatgctggtgggggtgatatg
atgggtgccaatggtcttgagatgcctgctttcactgctcagcttaccacaccattccct
ccagttggcacgccaatagtgcttgacaaactactatataatgggcgtcagaattacaac
cctcagaccggtgtgttcacctgtgacctcccaggcatctactactttgcctatcatgtg
cactgcaagggtgccaatgtatgggttgggctctacaggaatgggcagccacttatgtat
acatatgatgaatacaagaagggattcctggatcaagcatctgggagtgctgtgattcca
ttacaaccaggagacacagtttatttacagttaccatctgaccaggcagctggattttat
gcaggacagtatgtccattcctccttctctggctttttactgtacccaatgtag
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