Megalobrama amblycephala (Wuchang bream): 125270431
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Entry
125270431 CDS
T08212
Symbol
ddx39ab
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125270431 (ddx39ab)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125270431 (ddx39ab)
Spliceosome [BR:
mamb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125270431 (ddx39ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125270431
NCBI-ProteinID:
XP_048050000
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All DBs
Position
LG1:42915352..42923023
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AA seq
427 aa
AA seq
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MAENDVENELLDYEEDEEPQGAPESVAPVGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgacgttgaaaacgagctgctggattacgaagaggacgaggagcctcaa
ggagccccggagagcgtcgctccggtgggcaagaaggaggtgaagggctcgtatgtgtcc
atccacagctctggcttcagagacttcctgctcaaaccggagctgctgagggccatcgtg
gactgcggttttgagcacccgtctgaagtgcagcatgagtgcatcccgcaggccatcctc
ggcatggatatcctgtgccaggccaagtccggtatgggaaagacggcggtgtttgtgctc
gctacgctacagcagatcgagccggtggacggacaggtgtcggtgctggtcatgtgtcac
acgcgtgaactggcctttcagatcagtaaggagtatgagcgcttctccaagtacatgccc
acggtcaaggtggccgtgttcttcggcggcatgtccatcaagaaggacgaggacgtcctg
aagaagagctgccctcacatcgttgtggggacgccgggcagaatcctcgccctggtccgc
aacaaaaccctcaacctgaagaacgtcaagcactttgtcctggacgagtgtgataagatg
ctggagcagctggatatgaggcgtgacgttcaggacatcttcagactgacgcctcatgag
aagcagtgcatgatgttcagcgccaccctcagcaaagagatccgtcccgtctgccgcaag
ttcatgcaggacccgatggaggtgtttgtggacgatgagacgaaactgacccttcacggt
ctgcagcagtactactgcaaactgaaggacagcgagaagaaccgcaaactcttcgacctg
ctcgacgtcctggagttcaaccaggtggtgatcttcgtgaagtctgttcagcgttgtgtg
gctctttcacagttactggtggagcagaacttccctgccatcgccatccacagaggaatg
gcacaggaagagaggttgtctcggtatcagcaattcaaagactttcagaggaggatccta
gtggccacaaacctgtttggtcgagggatggacattgagagggtcaacatcgtcttcaac
tacgacatgccagaggactcagacacgtatctccacagggtggctcgtgcgggtcgcttc
ggcaccaagggtttggccatcacatttgtgtcagatgaaacggatgccaaaatcctgaat
gatgtgcaggaccggtttgaggtcaacgtggctgagttacctgaggagattgacatttcc
acttacattgaacagtccagatga
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