Megalobrama amblycephala (Wuchang bream): 125270475
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Entry
125270475 CDS
T08212
Symbol
itgb5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04145
Phagosome
mamb04148
Efferocytosis
mamb04510
Focal adhesion
mamb04512
ECM-receptor interaction
mamb04810
Regulation of actin cytoskeleton
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125270475 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125270475 (itgb5)
04148 Efferocytosis
125270475 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125270475 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125270475 (itgb5)
04810 Regulation of actin cytoskeleton
125270475 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125270475 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125270475 (itgb5)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125270475 (itgb5)
Cell adhesion molecules [BR:
mamb04515
]
Integrins
Integrin beta subunits
125270475 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
HemY_N
Motif
Other DBs
NCBI-GeneID:
125270475
NCBI-ProteinID:
XP_048050075
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All DBs
Position
LG6:complement(32703396..32745423)
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AA seq
815 aa
AA seq
DB search
MLNGVLILQGIMWKLCPFTRHPALLVYIVLEIFIHSVNGLNVCMSGSATSCEECFLIHPS
CAWCAQEDFGRARTLTSRCDFSQNLLKRGCDAPFIENPRSGSSLLRSKPLSSKGSGVTQY
DVIQIYPQKISLSLRPGDQTSFEVQVRPVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKL
AEEMRKLTSNFRLGFGSFVDKNISPFSYTAPKYQDNPCNGYKLFPNCVPTFGFRHLLSLT
DKVDRFNEEVQKQMVSRNRDAPEGGFDAILQAAVCKEKIGWRKEAYHLLVFATDDVPHLA
LDGKLGGLVHPHDGQCHLNDKNEYSAATKMDYPSLALLGEKLAENNIFLIFAVTKRHYVL
YKNLTALIPGTTVEILDQDSKNIIQLIVNAYNNIRSKVELSVWDHPEDLSLAFTATCQDG
QPLTGLRKCADLKIGDTVSFNITVDARGCPPKGTKKSFTIRPVGFKDRLEVSVDYRCDCS
CTYYTEANSSRCNSAGTYSCGMCRCEPGYLGARCECQEGEVDHQYLSACREAEGKQVCSG
RGECSCNQCLCYESEFGKIYGTFCECDDFSCARHKGTLCSGHGECHCGECKCHAGYIGDN
CNCSTETASCVSDDGKICSGRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIEC
HLFNTGRLADNQTCQRMCKDEIITVETLKTDDPNTVQCVYKTEKDCVMKFTYSEHANGQS
VLTALKEPECAVAPNAMTVLLAVVGSILLMGILLLALWKLVITIHDRREFSRFQSARSRA
RYEMASNPVYKQSIPSHPMETFHMHSTKSCNGGVH
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacggggttttgattttgcaaggaataatgtggaaactctgcccatttacacgt
cacccggctcttctagtttacatagtcttggaaatatttattcacagcgtcaatggtctt
aatgtttgcatgagcggcagcgccacatcttgtgaagaatgtttcctcattcacccgagc
tgcgcctggtgcgcgcaagaggattttggacgggccagaacactcacctcacgatgtgac
tttagccagaacttactgaaaagaggatgcgatgctccttttatagagaatcccaggagt
ggcagctctctgttgcggagcaaacccctgagctccaaaggttctggggtgacccagtat
gatgtcatccagatatacccacaaaagatctctctcagcttaaggcctggtgatcagact
tcatttgaagtacaagtgcgccctgtggaagactaccccgtggatttgtactacctgatg
gacctctcgctctccatgaaggacgatctggacacaatccgcaacctgggcaccaaactg
gctgaggaaatgaggaagctcacgagtaacttccgccttggttttggctcctttgtggat
aagaacatctcgcccttctcctacacagcccccaagtaccaggacaacccatgcaatgga
tataagttgttcccaaactgtgtccccacatttggctttcgtcacctcttgtctcttacg
gacaaggttgatcgtttcaacgaagaagtgcagaagcagatggtgtcgcgtaacagagat
gcaccagagggggggtttgatgccattctgcaggctgcagtttgcaaggagaagattggc
tggaggaaagaggcctatcatctcctggtgtttgccaccgatgacgtccctcacttggct
ttggatggcaagctcggtggtctagtgcatcctcacgatggacagtgtcacctgaacgac
aagaacgagtacagcgctgcaacaaagatggactacccttcactcgcacttcttggagag
aaactggctgaaaacaatattttcctcatctttgcagtaaccaaaagacactatgttctt
tacaagaatctcactgcgttgatccctgggactacagtggaaattttggaccaagactcc
aaaaacattattcagctaattgtgaacgcatacaataacatcaggtcgaaggttgagctg
agcgtgtgggaccatcctgaagatctcagtctggccttcaccgccacctgccaagacggc
cagcccctgaccggcctccgcaagtgtgctgacctcaaaattggtgacacggtctccttc
aacataactgtagatgctcgaggatgtcctccgaaaggcaccaagaagagtttcaccatc
aggcctgttggttttaaagaccgtctggaggtctctgtggactaccgctgcgactgcagc
tgcacgtattacacagaggccaacagcagccgctgcaactctgccggcacctacagctgt
gggatgtgccgttgtgagcccggctacctgggagcccgctgcgaatgccaggagggagag
gtcgaccaccagtacctcagtgcctgccgtgaggccgagggcaagcaggtgtgcagcggc
cgcggagaatgcagctgtaaccagtgcctgtgctacgagtcagagtttggcaaaatctac
ggcaccttctgcgagtgtgatgacttctcctgtgctcgacacaagggcacgctgtgctca
ggtcatggggaatgccactgcggtgagtgtaaatgccatgctggttatattggagacaac
tgtaattgctctacagagacggcttcctgtgtgtcagacgacggaaagatctgtagcggg
cggggcagctgtgtgtgtgggcggtgccaatgcactgagccaggggcatttggggacacg
tgcgaaaaatgtcccacctgtccagatgcctgtggaacaaagagggaatgcattgagtgc
catctttttaacacaggaagactggccgataaccagacctgtcagcgcatgtgcaaggat
gagatcatcaccgtggaaaccctcaaaacagatgatcccaacaccgttcaatgcgtgtat
aagaccgagaaggactgtgtgatgaagttcacatactccgaacatgccaacggccaatcg
gtcctgaccgctcttaaggagccagaatgtgctgttgccccaaatgccatgacggtgctt
ctggcagttgttggcagtatcttgttgatgggcatcttgctgctagccctctggaaactg
gtcatcaccattcacgaccgccgcgagttttcacgcttccaaagtgcacgttcacgggcg
cgttatgagatggcatctaatcctgtttataaacagtccatcccttctcacccaatggag
acgttccatatgcacagtactaagtcgtgcaatggaggagtccactga
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