Megalobrama amblycephala (Wuchang bream): 125270501
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Entry
125270501 CDS
T08212
Symbol
lmo7a
Name
(RefSeq) LOW QUALITY PROTEIN: LIM domain only protein 7
KO
K06084
F-box protein 20
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125270501 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125270501 (lmo7a)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125270501 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
125270501
NCBI-ProteinID:
XP_048050110
LinkDB
All DBs
Position
LG6:33086089..33146830
Genome browser
AA seq
1939 aa
AA seq
DB search
MEWRPRSAVGYEAAYSEAQRWIEAVTKKKFGSSNFRSSLENGLLLCDLINKIKPGIIKKL
NRLSTPIAGLDNISLFLKACAKLGLKEAQLFHPGDLQDLSTRVTVKRQESSRRLKNVLIT
IYWLGRKAHADPFYNGPYLKLKAFEGLLGTALYKALEDCTSLRGSAQNSTRRDSWYSRKE
ELFPLRAGHRREDSLDSLDSLGSRTYSTSSDATLKGSSEGCGSDPEADLSFTMSEIKEYR
RSLVLTPKTTTPFNQFLPTKDKQSGYVPAPLRKKRAERNEDNRRSWASPMFTEDDGTFSS
HERAGSDPSSITGLKSQTTAHQSLAYEYESSDSDADRPDPDVVLDDLASRRFHSPSPVAP
TNFALPMSPLEAAGVSCTSRSQVTVSNVPRQSLTHLSSQSQPLQRTYRRPDACIYDDSEE
EDDEFGYADPVQDDLYARKVGLMPQTSATEPFDKFLPKFWTPEEDAHVKMIKLGSQRRPW
YRKIQGFSRKKSGSSSEESDGDINPWLSVPTFSRTQSEPPSSHSHAPEGLAQSSLTSTPS
SQTQHLTVAQQSAGLSKLKPPDFWPRPDPASGPRLIKCEKHPLLGREHPNDPYNVSADIL
PDLENDDMFTRRTKAFHSSDDLAKLKYGNFLVPRRRSEADVTVVIQPRHEGEPVYPDIEK
DDVVFRRAQQQICHRPLSGAPDNYHPVPIPETWALPPKLQAKLMCVPIEPRQNKPKPEIK
HREKQHLKTDDMLLRKLKALNTQGMEEKGSPSVSLSCNEEDMQKWQAIREASRVRYRKRL
MVERLLQKSSDSKGSKSVSDITDSETKLSTSTIELRFEELQKMRARLKENEDKWQDDLTK
WKNKRRSVNSDIVKKKEEREQIEQITSSGARKSKTFKEMQDEREGREQSDFRDRFNSSVD
DVFEDPVPRSRTLPARSYTIDVPYAPTDKPSLPSIPSLREKEPVAGTLASDQTDFPTKPD
RSSPDIPISMNYSIQESKTTTQNLLDDPVPAFSDSLIKPTSMIKPISVSKPSSVLNSSDL
ISNTKPVENSSNPISSLYKPNSMDTKQSGLDHVSASLPRSYQRSDSARLPSVVTPRPFGT
QANRITSLPRAFTMDDSLKRTNGETDSLKKTTVSNRYAQYVKEDDDISQESSKHSSDEDE
RSEERTPSPVPLVNKVSPLPKSSFPLVPPNEVDYSEMRISLNQKPNSSRDFGFQNDWDST
GVRVKSVVPGSTAEHGQVKVGDEILMVNGHRVADMSYNEWKSSMEEALQQGSLLMDIRRH
GKNNWGRDLPSLPFKSHKTINLTSLDPLGPSEPYLSTNLDFTSQQTKDNVVKTVNISSQP
GNNHGSNGINGGFREDPENVNNKESISMKNLKRRSEFFEQGSAGLTVSSLVYLCGGSETA
ISNLPMPSITTSTTRWSWDPEEERRRQEKWQKEQERLLQEKYKKDQEKLDEEWRKAQQDL
VKGGSKDYEAEMELDRHNLYSPLSSIRQPTVSWEEQEASRLAQQEEERKKREEERLRLED
EKKREKERLRLEEERKKREEQRLQLEEERRKQEEKERLEEERKREEEKRKKREEERQRLE
EERIKREEERLWLEERRKKEEQERLEEQRRKREEEERLLQEKERNRREEERRRLEEQKRF
QDQDKVDSFGYTNVYPELSYSHRSLSKSTPELDEVAKPDIKGVYSRHRGLAGWLLEEELR
RKKNPQIQRKQAASELELERRSILNAMKYRDPERASGGLGEVSRDYKKEPLTQAEVERQQ
ILQEMKKKTSLNTDNSWIRQQSSASVTAKEPVDLPMRRGESLDNLDMPRSSWRSSWSTSN
STSLIPDYSRPHSALSGSSSYYSGRPGSATLPASQSMSSLKQSWSPSPTTPEPEPQAPLR
NRSVSGRKICSFCNTPLGKGAAMIIESLGLCYHLNCFKCSDCRSDLGGSQAGAEVRIRNQ
QLYCNSCYMRLKTGQPTSM
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgaccgcggtctgctgtgggttatgaggctgcttactcagaagcacagaga
tggattgaggcagtcactaagaagaagtttgggagcagtaatttccgaagttctctggag
aatggacttctgttgtgtgatctgatcaacaagatcaaacctggcatcatcaagaaatta
aacaggttatccacacctattgctggcctggacaacatcagcctcttcctaaaagcctgt
gcaaagcttggactaaaagaagcccaacttttccacccaggagacctgcaagacttatcc
acacgtgtgactgtcaaacgccaggagagcagcaggaggctcaaaaatgttctgatcacc
atatattggttgggcagaaaggcacatgctgatccgttttacaatggaccttacctaaaa
ctaaaggcttttgaaggattacttggcacagcactatataaggcactagaggattgcaca
tcactgcggggcagtgcacaaaacagcactcgtagagatagctggtactcaaggaaagaa
gagctcttcccactacgagccggacacagaagagaagactctctagacagtctcgactcg
ctgggctccagaacttacagcacatcctcagacgctacactcaaaggaagcagcgagggt
tgtggtagtgaccctgaagcagatctgagcttcacgatgtcagaaattaaggaataccgc
cgttcgttggtcttaacccctaagaccaccactccgttcaatcagttcctgccaacaaag
gacaagcagtcgggctatgttccagcaccattacgcaagaaacgcgctgagcgaaatgag
gacaacagaagaagctgggctagccctatgttcacagaagatgacggcactttttctagt
catgagagggcaggttcagacccttcatctatcaccgggttgaaatcccagacaactgcc
caccagtctttggcctatgagtatgagagcagtgattcagatgcagatcgtccggatccc
gacgtggttctagatgacctcgctagccgtagatttcacagcccatcccctgtcgctccg
accaactttgccttacccatgagcccgctggaggcagctggtgtctcgtgtacctccagg
tcacaggtgactgtcagtaatgtgccccggcagtcactgacccatctcagcagtcagtca
cagcctcttcagaggacttacaggaggcctgacgcctgcatttacgatgactctgaagaa
gaggatgatgagtttggctatgctgatcctgttcaagatgacctttatgcccgtaaagtt
ggcctgatgccccaaacatctgccacagagccttttgataaatttctgcccaagttctgg
acacctgaggaggatgcacatgtgaagatgatcaaactgggctcccagcgccgcccttgg
tacaggaagatccaaggtttcagtcgcaagaagtcaggttcgtcctctgaagaatcagat
ggtgacatcaatccctggctctctgtacctactttttctcgcactcagtctgaaccccct
tcctctcactcccatgcacccgaaggcctcgctcagtccagcctcacttccactcccagt
tctcaaacacaacacctcacggttgctcagcagagtgctgggctctctaagttaaagccc
cctgatttttggcccagaccagatcccgcttctggccccagactcataaaatgcgaaaaa
catcccctccttgggcgtgaacaccctaacgacccatacaacgtttctgccgacatccta
cctgatttggaaaatgacgatatgtttacacgtcgtacaaaagccttccactcgagtgat
gatctggccaagttgaagtacggtaacttcctggtgcctcgccgcagatcggaggctgac
gtcacagtagtaattcagccccgtcatgagggtgaacccgtttatcctgacattgaaaaa
gatgatgtggtttttcgaagggctcaacagcaaatctgtcatcgccctctgtctggggcc
cctgataactaccaccctgttcctattccagagacatgggctttgccaccaaaactgcag
gccaagctgatgtgtgtcccaattgaacccagacagaacaaacccaaaccagagattaaa
cacagagaaaaacagcacctgaaaacagatgatatgctacttaggaagctaaaagcttta
aatacccaaggaatggaggaaaagggatctcccagtgtttctttgtcttgcaatgaagaa
gatatgcagaaatggcaagccatcagagaggccagccgtgtgcgatacaggaagaggctg
atggtggagagactgctccagaaaagctctgatagtaaagggagcaaatcagtgagcgac
atcactgacagtgagacgaagctcagcacctcgacgatagagttgcgcttcgaagagctg
cagaagatgcgtgctcggttgaaggagaatgaagataaatggcaagatgatcttacaaag
tggaagaataagcgcagaagtgtgaattctgacattgtgaagaaaaaagaggagagagaa
cagatcgagcagatcacttcaagcggcgccaggaaatcaaagaccttcaaggaaatgcag
gatgagagagagggccgtgagcaaagcgacttcagggaccgctttaactcgagcgtcgat
gatgtctttgaagatcctgtaccccgaagcagaactctgccagcacgtagctacaccatt
gacgtcccttacgctcccacggacaaaccttccctaccctccataccatctctaagagaa
aaggaacctgtggctggcacgctggcatcagatcagactgattttcctaccaaacctgat
cgctcaagtccagatatcccaatttcaatgaattacagcattcaggagagcaaaacaaca
acccaaaaccttctggatgatccagttcctgctttctccgacagcctgattaagcccacc
agcatgatcaagcccatcagcgtcagtaaacccagcagcgttctcaacagctcggacttg
attagcaacactaagccagttgagaactccagcaaccccattagctcattgtataagccc
aattcaatggatacaaagcagtctgggctggatcatgtttctgcctccctccccaggagc
taccagagatcagatagcgcaagactcccctctgtagtcacgcctaggccattcggcaca
caggccaaccgaataacctctcttcccagagcattcacgatggacgactctcttaagcgc
accaatggagagacagacagcctcaagaaaactacagtttccaaccgctatgctcagtat
gtgaaagaggatgacgatatctcccaggaaagctctaagcacagcagtgacgaagatgag
agatcagaggagagaaccccgtctcctgtccctctggtcaacaaggtgtcacccctgcct
aaatcttcattcccgctcgtccctcccaatgaggtggactacagtgagatgaggatcagc
ctgaaccagaaacccaacagtagccgggactttggcttccagaacgactgggactccact
ggggtccgtgtcaaatctgtagttccaggcagcacagcggagcacggtcaggttaaggtt
ggagatgagatccttatggtgaacgggcaccgggtggcagacatgagctataatgagtgg
aagagcagtatggaggaggccttacagcaaggaagtctgcttatggacatccgcagacat
ggcaagaataactggggcagagacctaccttcccttccatttaaaagccataagaccatc
aatctgaccagtctggatcctctaggtccctctgagccatatctcagcaccaacctggat
ttcacatcccaacaaaccaaggacaacgttgtgaaaactgtgaatatcagctcacagcca
ggcaataatcatggctcaaatgggataaatggaggcttccgtgaggatccagagaatgtg
aataataaagaatccatttctatgaaaaacttaaaaaggagatcagagttttttgaacaa
ggctctgcagggctcacagtcagttctctggtctacctctgtggtggatccgaaacagca
atatcgaatcttcccatgccctccatcactacatccactacacgctggtcctgggatcca
gaagaagagcgcagacgtcaggagaagtggcagaaagagcaggagcgtttgctgcaggag
aagtacaaaaaagaccaagaaaaacttgatgaggaatggagaaaggcacagcaagatctt
gtgaaggggggctccaaagattatgaggcggagatggagctggacagacacaacctctac
tcccctctgtcctccatcagacaacctactgtttcttgggaagagcaagaggcttccaga
ctagcccagcaagaggaagaaaggaagaaaagagaagaggagaggttacgtttagaggac
gagaaaaaaagagagaaagagaggctgcggttagaggaagagagaaaaaagagagaggaa
cagaggctgcagttagaggaagagaggagaaaacaagaagaaaaagagcgtcttgaggaa
gagaggaaaagagaagaagaaaagaggaagaaaagggaagaggagaggcagcgattagag
gaagagagaataaaaagagaggaagagaggctgtggttggaagagagaaggaagaaggaa
gaacaagagcgccttgaggaacagaggaggaagagagaagaggaagagcgcctccttcag
gaaaaagagaggaatagaagagaggaggagaggaggcgactggaagagcagaagagattt
caggatcaagataaggtggactcctttggctataccaatgtttaccctgaattatcctac
tcacacaggtccctttccaaatccactccagaacttgatgaggttgcaaaaccagatatt
aaaggtgtgtacagcagacacagaggtttggcaggatggctgctggaggaggaactgagg
cgaaagaaaaaccctcagatccagagaaagcaggcagcgagtgagctagagcttgagagg
aggagcatcctcaatgccatgaaatacagagacccagagagagcaagcggtggtttgggt
gaggtcagcagggactataagaaagagcctctaactcaggctgaagtggaaaggcaacag
atccttcaagaaatgaagaagaagacttccttgaacacagacaacagctggattcgccag
cagagctctgccagtgtcaccgccaaagaaccagttgatcttcccatgaggaggggcgag
tctcttgacaacctcgatatgcctcgttcctcctggagatcatcatggagcacatctaac
agcacttcgctcataccagactacagccgtcctcattcggccctctctggctcctcgtcc
tactatagtggacgtccagggtctgccactctgccggcatctcagtccatgagctccctc
aagcagtcctggtctccatccccaactacaccagagccagagcctcaagctccactacgg
aataggtcagtgagtggcaggaaaatctgttcgttctgtaataccccactgggcaaagga
gcagccatgatcatcgagtccctggggctctgttatcatttgaattgtttcaagtgctct
gactgcaggtctgatttgggaggctcacaagcaggagcagaagtcagaatacgaaaccaa
cagctttattgtaactcctgctatatgcgactcaaaactgggcagcccacatccatgtga
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integrated database retrieval system
