Megalobrama amblycephala (Wuchang bream): 125270522
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Entry
125270522 CDS
T08212
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mamb03037
]
125270522 (ift88)
Cilium and associated proteins [BR:
mamb03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
125270522 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_14
TPR_6
TPR_16
TPR_7
TPR_11
ANAPC3
TPR_17
TPR_9
ARM_TT21_5th
TPR_10
TPR_CcmH_CycH
TPR-S
ARM_TT21_4th
ARM_TT21_2nd
HAT_PRP39_C
TPR_MalT
TPR_15
DUF6584
ARM_TT21_C
DUF2225
HEAT_Nup120
SHPRH_helical-1st
Consortin_N
TPR_21
RNPP_C
TPR_4
Motif
Other DBs
NCBI-GeneID:
125270522
NCBI-ProteinID:
XP_048050163
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All DBs
Position
LG6:33493178..33506365
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AA seq
857 aa
AA seq
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MENVHLVPEEEEDDLYTGYNDYNPTFDSEDLHNDVGFQQAVRTSHGRRPPMTAKYPGTAI
GGRPIGTAYGSRIPVGTAMGRPMTGAVQDGAARPMTAVRAAGYSSSIARGSVFDPLGQAK
GPAPPLEKQNEDTPEEKIKILEKKVNDLIEESCLAHARGDLQLSLEKAKEAGRKERALVR
QREQTGTADHINLDLTYSVLFNLANQYANNDMYTEALNTYQVIVKNKMFNNAGRLKVNMA
NIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVFIHMGQYSDAITSFEYIMS
ESPNIKTGFNLILCYYAIGDRERMKRAFQKLICVPLDIDDEDKYIPANDDSHANMVIEAI
KNDKLHQMERERKALAEKYIMTSAKLIAPAIESSFAAGFDWCVDMVKGSQYVELANDLEI
NKAITYLRQRDFKQAEAVETLKMFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYAELAM
SADRYNPAALINKGNTVFVKEDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEEA
LDCFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDLYD
NEGDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQ
LMVASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEVQDYATKLKKVE
KMKEIREQRVRSGRESSARGRREGSAGSGSSSSPINTPPLRASVSRSEAKYSPVLQQGRD
SGQSNHGTSAKGERLSVKLKTLPGSNEPYEASTQQEIDASYVDPLGPQMQRPKTAVRKRT
EEDEFADEELGDDLLPE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtgcatcttgtcccagaggaagaggaggatgatttgtatacaggctacaat
gattacaatccgacttttgactcagaggaccttcacaacgatgtgggctttcagcaggcc
gtcaggacaagtcatggcagaagaccacctatgaccgcaaaatatcctggcactgctatt
ggagggcgaccgattggaacagcttatgggtctcggattcctgttggcactgcgatggga
aggcctatgactggagctgttcaggacggtgcggctcgtcccatgactgcagtgcgggca
gcaggatactcttcatctatagctagaggctcagtgtttgatccactgggacaagcaaaa
ggaccagcccctccattagagaaacagaacgaagacactccagaggaaaagataaagatc
ctggaaaagaaggtgaatgatttgatagaggagagctgtctcgctcatgctcgtggggat
cttcagctgtctctagagaaagccaaagaggcgggcaggaaggaaagggctctggtgaga
cagagagaacaaacaggcaccgcagaccacatcaatctggatctgacctactctgtgttg
tttaatttagcaaaccaatatgccaataatgacatgtacactgaggccttgaacacgtac
caagtcattgtgaagaacaaaatgttcaataatgccggacgattgaaagtaaacatggca
aatatatatttcaagcaaaagaattacacaaaagcaatcaaattttaccgcatggctttg
gatcagatctcaaatgcccacaatgcaatgaggatcaagatcatgcagaacattggtgtt
gtgttcatacatatgggccagtactcagatgccatcacatcctttgagtacatcatgagt
gagagtcccaacataaagacaggcttcaacctcatcctgtgctactatgccattggagac
cgtgaaaggatgaagagagcttttcagaagctcatttgtgtgcccctcgatattgatgat
gaagacaagtatatccctgcaaatgatgactctcatgcaaacatggtgattgaggctata
aagaatgataagcttcaccaaatggaaagggagaggaaagcattagcagaaaaatacatt
atgacctcagccaagcttattgctccagccattgagtcgtcatttgcagctgggtttgac
tggtgtgtggacatggtgaagggttcacaatatgtggagcttgcaaatgacttggagatc
aataaagctattacatacttaagacagagggacttcaaacaggctgaggcagtggagacg
ctaaagatgtttgagaagaaggacagtcgggtaaaaagtgccgctgccactaatctatct
tttctctactttttggaaaaagattatgaccaggctgaccgctatgctgagctggccatg
agcgccgaccgctataaccctgctgccctcattaacaaaggcaacacagtgtttgtgaaa
gaggactatgagaaagcagcagagttttacaaggaggctcttcgcaatgactcgtcctgt
accgaagccctctataacttaggtttgacctataagaggctgggtaggctggaggaagcc
ctggactgcttcctcaaactgcacgctatcctcagaaacagtgctcaggtcatgtaccag
ctggctaatctatatgagatgttggaggaccctcatcaggccattgagtggctgatgcag
ctcaccagtgtgacccccacagatgcccaggtgctggccaaactgggagacctctatgac
aatgaaggagacaaatctcaggccttccagtactattatgagtcgtacaggtattttccc
tcaaacattagtgtgatcgaatggttgggagcatattacattgacacccagttctgtgag
aaagctattcagtactttgagagagctacccttattcaaccaacacaggtcaagtggcag
ctgatggtggctagctgttacaggagaagtgggaattatcagaaggcacttgagacctac
aaggacattcatcggaaatttcctgaaaatgttgaatgtctacgcttcctggtcaggctg
tgcactgatatgggactaaaagaggtgcaggattatgccaccaaactgaagaaagttgaa
aaaatgaaggagatcagagagcagagggtgagatctgggagggagagcagtgctcgaggt
cgcagggaaggcagcgctggcagtgggagcagctcaagccccatcaatacccctcctctg
agagccagtgtttctcgctctgaagctaaatatagtcctgtgctgcagcagggcagagac
agtggacagagcaaccatggcaccagcgccaagggtgagaggcttagcgttaaactgaaa
actcttcctgggtccaatgaaccgtatgaggccagcactcagcaggaaatagatgcttct
tatgtcgatccattggggcctcaaatgcagagaccaaaaacagcagtgaggaaacgcaca
gaggaagatgagtttgctgacgaagagctgggagatgacttactgcctgagtga
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