Megalobrama amblycephala (Wuchang bream): 125270688
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Entry
125270688 CDS
T08212
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
125270688 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125270688 (hdac4)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125270688 (hdac4)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125270688 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
125270688
NCBI-ProteinID:
XP_048050524
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All DBs
Position
LG6:complement(38834376..39094158)
Genome browser
AA seq
1052 aa
AA seq
DB search
MSSHSRPDGLPSKEQPLELLKPSGVNHIPSVDVSAALPLQVPPSAIPMDLRVDHQFALAP
TDSAQREQQLQQELLALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLQEHVKHQQDLLAL
KHQQELLEHQRKLERHRQEQELEKQQREQKLQLLKNKERGQESAVASTEVKMRLQEFVLN
KKKALAQRSLNHCLPSDPRYWYGKTQHSSLDQSSPPQTGISTYNHPVLGMYDPKDDFPLR
KTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPVTTAKKRSLDMAESACSSAPGSGPSSP
NNSSNNITNENGIAGSISNSSMEPSLAHRLAGREGPVSQLSLYTSPSLPNITLGLPATGP
SSMASGQQDGDRMAVQGLQPGIPITTPFMPGAHLPSYLAASSLERDGGSAHNTLLQHMVL
LEQSAAQNSLVAGLGGVPLQSHPIHKLRQHRPLGRTQSAPLPQNAQALQQLVVQQQHQQF
LEKHKQQFQQQQLHISKMMAKPNEPGRQHESHPEETEEELREHQGLGDSSEGLPHGVTIK
QEPPDEQDEEFQQRERQAEEEMLFRQQALLLEQQRIHQLRNYQASMEAAGLSVTFPGHRP
LSRAQSSPASATFPIVVQEPPAKPRFTTGLVYDTLMQKHQCMCGNSNIHPEHAGRIQSIW
SRLQETGLRGQCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCG
GIGVDSDTIWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFAVVRPPGHHAEESTPMGF
CYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYVSLHRYDDGNFFP
GSGAPDEVGIGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSG
FDAVEGHPPPLGGYKLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSAL
LGNELDPIPEDVLQQRPNPNAIQSMEKVLEIQSKYWRSLQRSASTLGYSLLEAQRCETEE
AETVTAMASLSVANKHMGKRTEEEPMEEEPPL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccacagccgcccagatggacttcccagtaaagaacagccactggaacttctg
aagccgtctggagttaaccacattccttctgttgatgtgagtgcggcactgccactgcaa
gtgccgccttctgccatccccatggacctgcgtgtagatcaccagttcgccctggcgccg
acagactcggcccagcgtgagcagcagctgcagcaggagctactggccctcaagcagaaa
cagcagattcagaggcagctcctgatcgcagagtttcagcggcagcacgagcagctctcg
cgccagcatgaagcgcagctgcaggagcatgtcaagcatcagcaggacctcctggccctg
aaacatcagcaggagctcctggaacaccagcggaagttggagcgccatcgtcaggaacag
gaactggagaaacagcagcgggaacagaagctccagttactcaaaaacaaagaacgcggc
caagagagtgctgtggcgagcactgaggtgaagatgaggttgcaggagtttgtcctcaac
aagaagaaagcgctggcccagaggagcctcaaccactgcctgcccagtgacccacgctac
tggtacgggaaaacccagcacagctctctggaccagagctcaccacctcagacagggatt
tccacttacaaccacccggtgctgggaatgtacgaccccaaagacgacttcccgctccgc
aagacggcatctgagcccaacctgaagctacgatccaggctgaagcagaaagttacggag
cgcaggagtagcccgctgcttcggaggaaggatgggccggtcaccactgcaaagaaacgt
tctctggacatggcagaatcagcatgtagcagtgctcctggttctggtccaagttcaccc
aacaacagttcaaacaacattaccaatgagaatggcatcgctggatcaatctccaacagt
tcaatggagccatctttggcacacagactcgccggcagagagggtcctgttagccagctg
tctctgtacacatcgccctcccttcccaacatcaccctgggcctgccagccaccggccct
tccagtatggcatctggccagcaggatggtgacagaatggcagtgcaaggcttacagcca
ggaatacccataaccactccattcatgccaggagcccacctgccttcttacctggctgct
tccagcttagagcgggatggcggctcggcacacaacactctcctccagcatatggtgctt
ctggagcagtcagccgcacagaactccctggtcgcaggcctgggtggcgtgcctctgcag
tcccatcccatccataagctccggcagcatcggcccctcggacgcacgcagtcggccccc
ctgccccagaacgcccaggcgctgcaacagctggtggttcaacagcaacaccagcagttc
ctggaaaaacacaagcaacagttccaacagcagcagcttcacatcagcaagatgatggct
aagccgaacgagccgggccgacagcacgagagccacccggaggagacagaagaggagctg
agggaacaccaggggctgggagactcctcggagggtcttccccacggggtcaccatcaaa
caggaacctccagatgaacaggatgaagagttccagcagagagagagacaagctgaggaa
gagatgctcttcagacagcaagctctcctgttggagcaacagaggatccatcagctgagg
aactatcaggcatctatggaggcggccggactgtctgtgaccttcccaggccatcggccc
ctgtccagagcacagtcgtccccggcctcagcgacctttcccattgtggtgcaggaacca
ccagccaaaccgcgctttaccaccggtctggtgtacgacactctgatgcagaaacaccag
tgcatgtgtggaaacagtaacatccaccccgagcacgccggacgcatccagagcatctgg
tcgcgactgcaggagacaggactgcgtggccagtgtgagtgtattcgaggcaggaaagcc
actctggaggagctacagacggtccactctgaggctcatgtgctgctttatggaaccaac
cccctcagacagaaactggacagctcagtgacacccatgttcgtgagactgccgtgcgga
ggaatcggggttgacagtgacactatctggaatgaagttcactcgtccagtgctgctcgt
ctggctgtgggatctgtagtggatctggtgtttaaggtggcttcaggagagttgaggaac
ggctttgctgtggttcgacctccaggacaccacgctgaggagagcactcccatgggattt
tgctatttcaactctgtcgccattgcagccaaactcctacagcagagactcaacgtcagt
aagattctcattgtagactgggatgttcatcatggcaacgggactcaacaggccttctac
agtgatcctaatgtcctgtatgtgtctctccatcgctacgatgatgggaacttcttccct
ggcagcggagcccctgatgaggtgggcatcggtccaggcgtgggctttaacgtgaacatg
gccttcaccggaggtctggagcctcccatgggggacgcagagtatttggcagcattcagg
acggttgtgatgcctattgcgaatgagttcgctccagacgtggtgctggtttcttcggga
ttcgacgctgtggaggggcacccgccacccctgggaggatacaaactcacagccaaatgt
tttggctacctgaccaagcagctgatgggactggccggcggccggctggtgctcgcgttg
gaggggggtcacgacctcaccgccatttgcgatgcctccgaagcatgtgtttctgcttta
cttggaaacgagttggatccgattcctgaagacgtgctacaacagaggccgaaccccaat
gccattcaatccatggagaaagttctggaaatccagagtaaatactggcgctcactgcag
cgatctgcctcgactctgggctactctctgctggaggctcagagatgtgaaactgaagag
gcagagacggtgaccgccatggcctccctgtctgtagccaacaagcacatgggaaagagg
acagaagaggagcctatggaagaggaacctccattgtag
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