Megalobrama amblycephala (Wuchang bream): 125271057
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Entry
125271057 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mamb04054
]
125271057
Pattern recognition receptors [BR:
mamb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125271057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
NLRC4_HD2
FISNA
LRR_6
UPA-FIIND
PRY
NOD2_WH
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
125271057
NCBI-ProteinID:
XP_048050953
LinkDB
All DBs
Position
LG7:complement(471066..508086)
Genome browser
AA seq
1567 aa
AA seq
DB search
MMQETPRSSSPEPNCVSLKSDKPLHHPPDLSDEAVTSDPSRGSQRASSPEPSCVFLKSDK
SLHHSPDLSDEPVTSDPITVYGDDQTGDHDSPQSVIDELQRVKDRHKTSMKNKYERLFEG
LKLKENETLLNRIYTQLYIIEGESEGVNEEHEVLQMEKKARTQHSQETPIYCNDIFKASP
EPGYEEKDQIKTVLTKGIAGIGKTVSVQKFILDWAEGKDNQDVDFMFVLPFRELNLIQDH
QYSLHRLLLDFHPELQDLDSKIYEESKVVFIFDGLDESRITEFSDEFSDAQKVSGVNETS
SVGVLMSNLMKGDLLPNALIWITSRPAAANQIPSKYINRLTEIQGFNEPQKEEYFRKRIS
DEHQASRIISHIRRARSLHIMCHIPVFCWISSTVLQKLLKEDLSAAIPQTLTEMYIHFLL
IQINMRNQKYEEKKTKELLKSNREVIVKLAEVAFKQLMKGNVMFYEEDLRESGIDVTDAS
VYSGICTEIFKEESLILQRKVYSFIHLSVQEFLAAFYVFYSHVVKNKEPLHEFRYYILNQ
ASLDDLLRSAVDEALWCKNGHLDLFLRFLLGVSLESNQRLLQDLLTHTENSSESIRKTTQ
YIKGKIKDKLNRYHLSADTSMNLSLCLLEMKDQTLSRDIQEFVKLDKYSEEKLSPAQCST
ISYMIQMSEEVLDELDATKYNTSDEGRRRLIPALINCRKALLTGCNITGQDCEIMTSALQ
SSNCVLRELDLSNNYLEDSGVKLLSDVLKSPNCQLQILRLSGCMMTEEGCGYVSSALSSN
PSRLREIDLSNNDLQDSGVKXISDGLTSPNCRLHTLRLSGCMMTEKGCGFVSSVLISNPS
YLRELDLSNNDLQDLGVKIISNGLISPNCQLHILRLSGCMMTEGGCGYMSSALSSNPSHL
RELDLSSNDLQDSGVKIISEGLKSPNCQLQKLKLSGCMVTEEGCGFVSSALSSNPSHLRE
LDLSYNHPGDSGVKLLSDKLKDCSLQILNVDHCGEFRITAGPQKYACDLTLDPNTANTRL
ILSEENRKVTRVFQDQSYPDHPERFDVTPQVLCGESLTGRCYWEAEWSRGAEISVTYKRI
SRKGESEDCVFGYNDKSWSLECSNKSFSAHHNKNSTKIPVISSSSKRVGVYVDVLAGTLS
FYSVSDTHTLTHLHTFNTTFTEPLYAGFGVHYYKSSVYLCDIKQHPLRNDSDTHTTRFSD
SKPSGLNIHPLLNCQSCVHIADSDQWVQIEPSACTDGGSKFRVSTDPGRYECVRTRMRWV
CDCDVTLQYCTVDGHFLNKELERLQCNRIGPVIDVTVISGKLEEVHLPHYACLGESDPSL
KDAVKVLSVKDEGITTEPVQLTRFHAKIVQPSFSLKTLIISWIMQVDEHCDLLLYMHSKV
PLILHVYFFPFDDCAKEKVEKEEKSSCPILHPRPDRPFRMKTPHILDISGALTIHPKEGI
TLRRETPPNYFKVTTRLENDLQMTLIREEDKEEVWTATILKDELDLINPKRDEPNLNSEA
VQMSSNTPTGDSVDVTADTGASVNAPVLTRNTITGPVHINYILNPAVHNAATRINEDSAT
EDSKSEN
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggagactccgagatcttcatctccagaacccaactgtgtgtctctgaagagt
gacaaaccactgcatcatcctcctgatctcagtgatgaagcagtgacctctgaccccagc
agagggagtcagagagcttcatctccagagcccagctgtgtgttcctgaagagtgacaaa
tcactgcatcattctcctgatctcagtgatgaaccagtgacctctgacccaatcactgtg
tatggagatgatcagactggagaccatgattctcctcaatcagtaattgatgaactacag
agagtcaaagaccgacacaaaaccagcatgaagaacaagtatgagagattatttgaggga
ctgaaactcaaggagaatgaaaccctcctgaacaggatctacacacagctctacatcata
gagggagagagtgaaggagtgaatgaagaacatgaggttttacagatggagaaaaaagcc
agaacacaacactcacaagaaactccaatctactgcaatgacatctttaaagcctcacct
gaaccaggatatgaggagaaagaccaaatcaagactgttctaactaaaggcatcgctgga
attggaaaaaccgtctctgtgcagaagttcattcttgactgggccgagggaaaagacaat
caggatgtagatttcatgtttgtgcttccatttcgagagctgaacttgatccaagatcat
cagtacagtcttcacagacttctgctggactttcatcctgaacttcaagatctggactca
aagatttatgaggagagtaaagttgtgttcatctttgatggtctggatgaaagcagaatc
acagagttttcagatgaattttcagatgctcagaaagtttctggtgtgaatgagacttca
tcagtgggtgtgttgatgtcaaacctcatgaaaggagatctgcttcccaatgctctcatc
tggatcacctccagaccagcagcagccaatcagatcccctccaaatacatcaaccgtctg
acagagattcagggattcaatgagcctcagaaggaggaatatttcaggaagagaatcagt
gatgagcatcaagccagcagaatcatctcacacatcagaagagcaagaagcctccacatc
atgtgccacatacccgtcttctgctggatctcatccactgtgcttcagaagctcctgaaa
gaagatctgagtgcagcaatccctcaaactctgacagaaatgtacatccacttcctgctg
attcagatcaacatgaggaatcagaagtatgaagagaaaaaaacaaaagaacttctcaag
tccaatagagaagtgattgtgaaacttgctgaagtggctttcaaacagctgatgaagggc
aatgtgatgttctatgaggaggacctgagagagagtggcatagatgtcactgacgcctca
gtgtattctgggatttgcactgagatctttaaggaggaatctttgattcttcagagaaaa
gtctacagcttcattcatctgagtgtccaggagtttcttgctgctttctatgtgttttac
tcacatgtggtcaagaacaaagagccactgcatgaattcagatattatatattgaatcaa
gcctctctggatgatctactaagatcagcagtagatgaagccctctggtgtaagaatgga
cacctggatctgtttctgcggttcctgctgggcgtctcactggagtccaatcagagactc
ttacaggatcttctgacacacacagagaacagctcagagagcatcaggaaaaccacacaa
tacattaaaggcaagatcaaagataaattgaatcgttatcatctatcagccgatacatcc
atgaacctgtctctctgtctgctggaaatgaaagatcagactctgtccagagacattcag
gagtttgtgaaattagacaaatattcagaggagaaactctctcctgctcagtgttcaaca
atctcctacatgattcagatgtcagaggaggttctggatgaactggacgccacgaaatac
aacacatcagatgagggtagaagaagactgataccagctctgatcaactgcagaaaagct
ctccttactggctgtaatatcactggtcaggattgtgaaattatgacatcagctcttcaa
tcctcaaactgtgtcctgagagagctggatctgagtaacaattacctggaggattcagga
gtgaagctgctctctgatgtactgaagagtccaaactgtcagctgcagatactgaggttg
tctggctgtatgatgacagaggaaggctgtggttatgtgtcttcagctctgagttcaaat
ccatcacgtctgagagagattgatctgagtaacaatgatctgcaggattcaggagtgaag
natatttctgatggactgacaagcccaaactgtcggctgcacacactgaggttgtctggc
tgtatgatgacagagaaaggctgtggttttgtgtcttcagttttgatttcaaacccctca
tacctgagagaactggatctgagtaacaatgacctgcaggatttaggagtgaagattatt
tctaatggactgataagcccaaactgtcagctgcacatactaaggttgtctggctgtatg
atgacagagggaggctgtggttatatgtcttcagctttgagctcaaacccctcacacctg
agagagctagacctgagcagcaatgacctgcaggattcaggagtgaagattatttctgaa
ggactgaagagtccaaactgtcagctgcagaaactgaagttgtctggctgtatggtgaca
gaggaaggctgtggttttgtgtcttcagctctgagttcaaacccctcacacctgagagag
ctggatctaagctacaatcacccaggagattcaggagtgaagctgctctctgacaaattg
aaggattgctcactgcagatactcaatgtggatcattgtggcgagttcagaattacagca
ggaccacaaaaatatgcctgtgatctcacactggatccaaacacagcaaacactcgtctc
attctgtctgaggagaacaggaaggtgactcgtgtgtttcaggatcagtcgtatcctgat
catcctgagagatttgatgttactcctcaggttctgtgtggagagagtctgactggacgc
tgttactgggaggctgaatggagcagaggtgctgaaatatcagtgacatataaaagaatc
agcaggaaaggagagagtgaagactgtgtgtttggatacaatgacaaatcctggagtctg
gagtgctctaataaaagtttctctgcccatcacaataagaacagcactaagatacctgta
atcagttcatcctctaagagagtaggagtgtatgtggacgtgttggccggcactctgtcc
ttctacagcgtctctgacacacacacactcacacacttacacacattcaacaccacattc
actgaacccctctatgctggatttggggttcattattataaatcctcagtgtatctgtgt
gacattaaacaacatcctttgagaaacgacagtgatacacacacaaccaggttctctgac
tccaaaccttctgggctcaatattcacccactgctgaactgccagtcttgtgtccatatt
gctgattctgatcagtgggttcagattgagccgtcggcctgtacagatggagggtcaaag
ttcagggtcagcactgacccaggccgatacgagtgtgtcaggaccagaatgcgatgggtc
tgtgactgtgacgtcacccttcagtactgtactgtagacggacacttcctcaacaaagag
ctggagaggctgcagtgtaaccggatcggtccagtgattgacgtgacggtgatctcaggg
aaactggaggaagttcatctgccccattacgcctgtttaggagagtctgacccctctctc
aaagatgctgtgaaagtcctcagcgtaaaagacgaaggaataaccacagaacctgtgcag
ttgacccgattccatgctaagattgtccaaccatccttctctcttaaaacattaataata
agttggataatgcaagtagatgaacactgtgatcttcttctctacatgcattctaaagtt
cctctcattctacatgtctactttttcccatttgatgattgtgcaaaagaaaaagttgag
aaggaggaaaagtcaagttgtccaatcctgcatcccagacctgacaggccatttcggatg
aaaacgccacacattcttgacatttctggtgccttgactatccatcccaaagaagggatc
acactcagaagagaaactcctccaaactacttcaaggtcacaacacgtctggagaatgat
cttcaaatgactcttatcagagaagaggataaggaggaggtctggactgcaacaattttg
aaagatgaacttgatctgataaatccaaagagagatgagccaaatttgaatagcgaagca
gtgcagatgagcagtaacactcccactggagacagtgttgatgtaacagctgacacgggt
gcaagtgtaaacgctcctgtactcacaagaaacactatcacgggcccagtacacatcaac
tacatcttaaaccctgcagtacacaatgcggcaacaaggatcaatgaagactcggctaca
gaggacagtaaatctgaaaactga
DBGET
integrated database retrieval system
