Megalobrama amblycephala (Wuchang bream): 125271184
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Entry
125271184 CDS
T08212
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125271184 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125271184 (smarce1)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125271184 (smarce1)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125271184 (smarce1)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125271184 (smarce1)
PBAF complex
125271184 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Sarcoglycan_2
Motif
Other DBs
NCBI-GeneID:
125271184
NCBI-ProteinID:
XP_048051149
LinkDB
All DBs
Position
LG1:44656425..44664268
Genome browser
AA seq
423 aa
AA seq
DB search
MSKRPPYAPAPTPAPTTQMPTTPGFVGYNPYSHLAYNNYRLGGNPGGNNRNSSGITVPKP
PKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNE
YEAEKIEYNDSLKAYHNSPAYLAYVNAKNRAEAALEEESRQRQSRLDKGEPYMSIQPAED
PDDYDDGFSMKHTAAARFQRNHRLISDILSEVVVPDVRSVVTTARMQVLKRQVQSLMVHQ
RKLEAELLQIEDRHQEKKRRFLESTDSFNNELKRLCSLKVEVDMEKLAAEMAAAEEAARR
RAEEREREAAEQVERAAQEEQQPAGVQANANTEQTSASESKDGEDKSTPMETETLAEASE
GSQEAEQGAGAAGEKPAQPEPAEGATDEGTSDSTAPSESSSGPPAEPQASDNTPEERLPT
QTQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcggccaccctatgcccctgcccctaccccagcccccacaacacaaatgccc
accacccctgggtttgtggggtacaacccatacagccatctggcctacaacaactacagg
ctgggagggaaccccggcgggaacaacaggaactcctcagggatcaccgttcctaagccg
cccaaaccgcccgacaagccgctgatgccctacatgcggtatagccggaaggtaagcagg
aaggtttgggaccaagttaaagcctctaatcctgacctgaagctatgggagattgggaag
atcattggtggcatgtggagggacctcactgatgaggaaaaacaggactatttaaatgaa
tacgaggctgagaagattgagtataatgactctttgaaagcctaccacaactctccagcc
tacctggcatacgtcaatgctaagaaccgcgctgaagctgctctagaagaagagagccgg
cagagacagtcgcgcctagacaagggcgagccctatatgagcatccagcccgctgaggat
cctgatgactatgacgacggtttctccatgaagcatacagcggcagctcgtttccagagg
aaccacaggctcatcagcgacatcttgagtgaggtcgtggtgcctgatgttcgctcagtg
gttaccaccgctcgcatgcaggtcctcaaacgtcaagtccagtccctcatggtgcatcag
agaaagcttgaagcagagcttcttcaaatcgaggaccgacatcaggagaagaagaggagg
ttcctggagagcacagactccttcaataacgagctcaaacggctgtgcagtctgaaagtg
gaggtggacatggagaagctggcagccgaaatggcggctgcagaggaggcggctcgccgg
agggcggaggagagagagcgggaagcagcagagcaggtggagagagctgctcaagaagag
caacagccagcaggggtccaggccaatgccaacacagaacaaacctctgccagcgagagc
aaggatggagaagacaagtccaccccgatggagacggagactctggctgaagcttctgaa
ggatctcaggaggctgagcaaggagcgggtgcagcgggagagaaaccggcccagcctgag
cctgcagagggcgctacagatgagggcaccagcgacagcactgctccatccgagagcagc
tccggacccccagcagaaccccaggcctcggacaacacccctgaggagcggctgcccacc
cagacacaataa
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