Megalobrama amblycephala (Wuchang bream): 125271782
Help
Entry
125271782 CDS
T08212
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125271782 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125271782 (exosc1)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125271782 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
125271782 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
125271782
NCBI-ProteinID:
XP_048051995
LinkDB
All DBs
Position
LG7:13881788..13890236
Genome browser
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGERLCSTEDCIPGTGTYLRHGYIFASLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctctgcagcacggaggactgtatc
cccggtactggcacgtatctgcggcacggctacattttcgcttcactcgcgggatacgtg
ctgagaaagaacgagggagaggagctcccggtgatttcagtcgttagggagacagaagca
caacttttgcctgatgtcggtgccatcgtcacctgtaaggtgacgagtatcaacccacgg
tttgctaaagtccacatcttatatgtggggtcaacaccactaaaagaccggttcagaggc
accatcagaaaagaagacgtgagagcaacagagaaagacaaggtggagacgtacaaaagc
ttcaggccaggcgacattgtccttgcaaaagtgatctctttaggggacgtgcagtccaac
tacctgctgaccacggcggagaatgagctgggcgtggtcgtggcccacagtgaggcgggg
gctcagatggtgcccatcagctggtgtgagatgcagtgtcctcggacgcacgccaaagag
ttccgcaaggtcgcgcgggtacagccggagtacctgcaggcctga
DBGET
integrated database retrieval system
