Megalobrama amblycephala (Wuchang bream): 125271841
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Entry
125271841 CDS
T08212
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125271841 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125271841 (smarca5)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125271841 (smarca5)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
125271841 (smarca5)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
125271841 (smarca5)
RSF complex
125271841 (smarca5)
WICH complex
125271841 (smarca5)
B-WICH complex
125271841 (smarca5)
NORC complex
125271841 (smarca5)
BRF complex
125271841 (smarca5)
NuRF complex (fruit fly)
125271841 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
125271841
NCBI-ProteinID:
XP_048052072
LinkDB
All DBs
Position
LG7:complement(16037455..16051169)
Genome browser
AA seq
1035 aa
AA seq
DB search
MSQTESSVEQQQREEPSQLDSVGPAEDDASENGRDEASDTAMDSEAHSSSSPSSKDKDQP
GGYEEKVKTDRTNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLS
VGDNRHRRTEQEEDEELLNESSKATSVCTRFDDSPSYVKTGKLRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRA
VCLIGDRDERTAFIRDTLLPGEWDVCVTSYEMVIIERAVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGD
TKLVERLHTVLRPFLLRRIKADVEKSLLPKKEIKMYIGLSKMQREWYTKILMKDIDILNS
AGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKLKE
QGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQVSINAFNEPNSSKFVFML
STRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERI
VERAEMKLRLDSIVIQQGRLVDPNMSKLGKDEMLSIIRHGATHVFASKESEITDEDIDAI
LERGEKKTMEMKEKLANLGESSLRNFTMDTENSVYNFEGEDYREKKKVITNWIEPPKRER
KANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGY
KVPRNPDLPNSAQMQKEEQAKIDEAEPLNEEELEEKENLLSQGFTIWTKRDFNQFIKANE
KWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIK
KALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIR
NSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPRTSSAQKRKQ
DGTPDGRGRRKKLKL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaacagaaagcagcgtggagcagcagcagcgggaagagccgagccaactcgac
tcggtcggtccggcagaggatgatgcttcagaaaatggtcgtgatgaagcatcagataca
gcaatggatagtgaagcgcactcgtcatcatctccctcatcaaaagataaggaccagccg
ggcggatatgaagaaaaagtgaaaacagaccggaccaacagattcgagtacctcctgaag
cagaccgaagtatttgctcatttcatccaaccagctgcccagaagactccaacttcacct
ctgaagatgaagcctggtcgccctcgcatcaaaaaagacgagaagcagaacctgctctct
gttggagataaccgccaccgtcggactgagcaggaggaggacgaggagctgctaaacgag
agcagcaaagccaccagtgtttgcacacgttttgacgattctccttcttatgtgaaaacc
ggcaaactgagagactaccaagtccgtggattaaactggctcatttccctctatgagaac
ggaatcaatgggatccttgctgatgaaatgggtcttggtaagactcttcagaccatctct
ctgctgggctacatgaagcactatagaaacattcctggacctcacatggttctggtaccc
aagtccaccctgtataactggatgaatgagttcaagcgctgggttccctctctacgagcg
gtctgcctcattggggacagggatgaaagaactgcttttatccgtgacacactgctgcca
ggtgaatgggatgtgtgcgttacctcctatgagatggtcattatcgagagggctgtcttc
aaaaagttcaactggagataccttgtcattgatgaggctcaccgtatcaagaacgagaaa
tcgaagctttcagagattgtgcgagagttcaagactacaaatcgattgctgctgactgga
accccactgcagaacaaccttcacgagctgtgggcgctgctgaacttcctgctgccagac
gttttcaactcctcagaggattttgattcctggtttgacaccaataactgtctgggagac
acaaaattggtggaacgtctacatactgtacttcgtccattcctgctgaggcgtatcaaa
gccgatgtggagaagtctctcctccccaaaaaggaaatcaagatgtatattgggctcagc
aagatgcagagagaatggtacaccaagatcttgatgaaggatattgacattctgaactct
gctggtaagatggacaaaatgcgtctgttgaacgtgctgatgcagctcaggaaatgctgc
aaccacccctacttgtttgatggcgcggagcctggccctccttacaccactgacctccac
ctggtggtcaacagcggaaagatggtggtgctggacaagctgctgcccaagctgaaagag
caaggttcccgtgtgctgatcttcagtcagatgaccagggtgctggacattctggaggat
tattgtatgtggcgcaactacggttactgtcgtctggatggacagactcctcatgaggag
cgacaggtctccatcaatgccttcaatgagcccaacagctcaaagtttgtgttcatgttg
agcaccagagcaggaggtctcggtatcaatctggccaccgctgacgttgtcatcatctac
gactctgactggaatcctcaagtggatcttcaggctatggatcgtgcccacaggattggt
caaaagaaacaggtgcgcgtgttccgattcatcacggaaaatacagttgaggaaagaatt
gtggagcgtgcagaaatgaagctccgcttggactccattgtcattcaacaaggcaggctg
gtcgatccaaatatgagcaaactgggtaaagatgagatgctgtccatcattcgacatggt
gccactcatgtgttcgcctctaaggagagtgagatcaccgatgaagacattgatgccatc
ttggagagaggagagaagaagaccatggagatgaaggaaaagctggccaatcttggagaa
agctcgctgaggaacttcaccatggacacagagaacagcgtgtacaactttgagggtgaa
gattacagagaaaagaaaaaggtcatcactaactggattgagccacccaagagagagcgc
aaggcgaactacgctgtggatgcttacttcagagaggctctgcgtgtcagcgagcccaaa
gcaccaaaggctccccgtcctcctaaacagcccaatgttcaagacttccagttctttccc
cctcggctgtttgagctgctggagaaggagatcctgtattacaggaagactattggctac
aaggtgccaagaaaccccgatctgcccaactcggcccaaatgcagaaagaagaacaggcc
aagatcgatgaagctgaaccacttaatgaggaagagctggaagagaaggagaacctcctc
tcacagggttttactatctggaccaagcgtgacttcaaccagttcatcaaggccaatgag
aagtggggaagagatgacatcgagaacatcgcccgggaggtcgagggcaaaaccccagag
gaggtcatggaatattcggctgtgttctgggagcgctgcaatgagctgcaggacattgag
aagatcatggctcagatcgagagaggagaggccagaatccagaggagaatcagcatcaag
aaagcactggactctaaaattggccgttataaggcgccatttcatcagctcaggatctcg
tatggcacaaacaaagggaaaaactacacagaggaggaggatcgatttctcatctgcatg
ctgcacaaactgggattcgacaaggagagcgtttatgatgagctccgccagtgcatacgc
aactcaccccagttccggttcgattggttcctcaagtcccgcacggccatggagctccag
aggagatgtaacacactcatcacgctcattgaacgtgagaacatggagttggaggagcga
gagaaagcggagaagaagaagaggggccctcgcacgtcttcggcccagaaacgcaagcag
gacgggacccctgatggacgtggccgcaggaaaaagctcaaattgtga
DBGET
integrated database retrieval system
