Megalobrama amblycephala (Wuchang bream): 125271853
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Entry
125271853 CDS
T08212
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125271853 (aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125271853 (aptx)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
125271853 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
125271853 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
125271853 (aptx)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125271853 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
125271853 (aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
125271853
NCBI-ProteinID:
XP_048052084
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All DBs
Position
LG7:16211385..16216820
Genome browser
AA seq
344 aa
AA seq
DB search
MPLCLLVSEDDSHKPIQLPHQQAVILGRGPETKIKDKKCSREQVELRADCNRGFISVKQL
GVNPTNVDSVVVGKGNQVTIKPGQRLYIVNQMYPYTVKFTEETFTPRSAAEGNKASKRSH
QMSCEGNGEKIKSPAKTTSTSSSRTSDASPPPKKTPPPGPDKSESAGHWSQGLKVSMQDP
KMQVYKDDKVVVIKDKYPKARYHWLVLPWDSISSLKALRSEHVDLLKHMQRVGDQMVQQC
RDAHKLRFRLGYHAVPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFVESQDVVTMLE
CDGKVTVKDGASELLKLPLRCHVCHKEQPTIPKLKEHLKTHTPA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgccactgtgcttactagtaagtgaagatgattcacataaacccattcagcttcctcat
caacaagctgtgattttgggtcgaggaccagagactaagataaaagacaaaaagtgctca
agagaacaagttgaattgagagctgattgcaacagaggatttatctctgttaaacagttg
ggtgtgaatcctacaaatgtggacagtgtggttgtgggcaaaggcaatcaggtgaccata
aagccgggccagagactttacattgtcaaccagatgtatccatatacagtgaagttcaca
gaggagacgttcacacccagatccgctgcggaggggaacaaagcctccaaaagatcccat
cagatgagctgtgaggggaatggagagaagatcaagagccctgcaaaaacaacatcaaca
tcctcctctcgtacatcagacgcttcacctccaccgaaaaagacaccgccgcctggacct
gataaatcagaatctgctggccattggagccaggggcttaaagtgtcaatgcaggacccc
aagatgcaggtgtacaaagatgataaggtggtggtcatcaaggacaagtacccaaaggcg
cgttaccattggctggttttgccatgggactcgatctccagtctgaaggctctgcggtcg
gagcatgtggacctgctgaagcacatgcagcgtgtgggagatcagatggtgcagcagtgc
cgtgacgcccacaaactgcgcttccgtctgggatatcatgccgtccccagcatgagtcac
gtccacttgcatgtcatcagccaagacttcgactcgccgtgtttgaagaacaagaagcac
tggaattccttcaccactgactattttgttgagtctcaagatgtcgttacgatgctggag
tgtgatgggaaagtgactgtgaaggacggcgctagtgaactactgaagctgcctctgcga
tgtcacgtgtgtcataaagagcagccgacgattcccaaactaaaagaacatctcaaaact
cacacgcctgcttaa
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