Megalobrama amblycephala (Wuchang bream): 125271865
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Entry
125271865 CDS
T08212
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb02010
ABC transporters
mamb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125271865 (abca1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125271865 (abca1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mamb02000
]
125271865 (abca1a)
Transporters [BR:
mamb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125271865 (abca1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
DUF7447
Motif
Other DBs
NCBI-GeneID:
125271865
NCBI-ProteinID:
XP_048052101
LinkDB
All DBs
Position
LG7:16373216..16412437
Genome browser
AA seq
2268 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRLYYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFIDAKKILLYSQQDK
SFEGFKGLVRALRKLQRKTEGFKLKDFLHDNETLSEFLEKNATLPKHAVRQIVEANVNLE
KVLIKGFGVHLRDLCNSTSLEEFVTIADKDVSQLTQNIICQSPAEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIIQDVSIATDSLLESLGALAVELVSMKSWRDMRNEIQYLTGNSTQSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNYGNDNDSDPVSAYDNSSTPYC
NNVMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQKIIHEVNKTFQELGVLRDLGGM
WEEMRPKLWNFMENSEEMDLVRTLLQNNASARFFNAKLSGTDWRVEDVSSFLSKASEDTR
PHGTAYTWREAFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMRLLDDRKFWAGI
VFPDMQSNTSDLPPNINYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDVFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLASFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
VVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYNLTTSISLMLFDSVLYA
IMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWVTAAPTNKKENAEAVCIEEEPAHL
DPGVYIENLVKVYSNGKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIQGKDIRTDLSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVQSEMEQIV
MDLGLPHKRKSRSNQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRPGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTMVKKDFDL
SASSCRTSSSTVSYSKGSLKKEDSVSESSSDAGLGSDHESETTTIDVSLISNVIFKHVPT
ARLVEDMGHEIMYVLPYESAKAGAFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DSGVDAEVSDGTLPARRNRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGADG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALEPSMYEEQFSFFSNDAPEDRHTNGLLEALMDSPAYNQQCTDQQNDVSKSCPIKD
GEWVVPEIPETVQDIFLKGNWSMENPSPLCECSCEGRKKMLPECPPGAGGLPPPQIKVTA
AETLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPDGDEVAD
AIAHIRNRFSLQAGTASDRFLGSLSTFIQGLDTKNNVKIWFNNKGWHSIGSFLSVMNNAV
LRANLPPGQERSKFGIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFICFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEIGGINNILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAIEGVIFFCITVLIQYRFCIKARPVSTKLKPIGEEDEDVARERQRILGGGGHTDILE
LKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLA
GKSVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKLG
LMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGANPQLE
PVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFNILSKNKEQLHIEDYSVTQTTL
DQVFVNFAKDQTDEDHLKDISIHKNDAVVDISQLDAFLIDQKAKESVV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagttggggttactgttgtggaagaacttcacttaccgacggaga
cagactattcagctgctgattgagataatatggccgctcttcatctttttcatcttgata
tcagtccgactctattatcctccctacgagcaacatgaatgccactttcccaataaggcc
atgccctctgcggggactttaccatgggtgcagggcatcatctgcaatgccaacaaccct
tgctttcgctaccccacccctggagagacgcccggagtggtgggcaacttcaatgactcc
atcatttcccgactgttcatcgatgccaagaaaattctcctctacagccaacaggacaag
agctttgaaggtttcaaaggacttgtacgggccttgagaaaactgcagaggaaaactgaa
ggtttcaaactaaaggacttcctccatgataatgaaacgttgtctgagtttctcgagaaa
aatgctaccctgcccaagcatgctgtgagacagatagtggaggctaacgtcaacttggag
aaggtgcttattaaagggttcggagttcatcttagagacctgtgcaattccacgtctctg
gaggaattcgtgaccattgctgataaggacgtgtctcagctgacgcaaaacatcatctgc
caatcacctgctgaatggctgaacaacgcagagagccacttcctgtccaacttagacttt
ctgaagccaatacggaaagatgtcaagtccgatccaaagattatccaggatgtgtctata
gcaacagacagcctgctggagagtttgggagcattagcggtggagctcgtgagtatgaag
agctggcgggacatgcgcaacgagatccagtacctgacgggcaatagcacacagtccccc
aaccacatgtaccaggccgtatcccgcatcgtctgtggccacccggagggcggaggcctg
aagatcaagtccctcaactggtacgaggataacaactacaaggctctgttcggcaactac
ggcaacgacaacgacagcgaccccgtttctgcttacgacaactcctctacgccctactgc
aacaacgtgatgaagggcctagagtcgagtcccatatcgcgcatgatttggagggctctg
aagccgctgctcatgggaaagatcttgtacacaccagacactcctgccacccagaagatc
atacacgaggtcaataagacgtttcaagagcttggcgtgctcagggacctcgggggcatg
tgggaagaaatgagaccgaaactctggaactttatggagaacagtgaggagatggaccta
gtgcggaccctcctccagaacaacgctagcgctcgcttctttaatgccaagctgagcggg
acagactggcgtgttgaggatgtgtccagcttcttgtccaaggcttcagaagacacacgt
cctcatgggacagcctacacgtggagagaggcgttcaacgagacggatcaagccatccaa
accatctctcggttcatggagtgtgtgaacttggataagttggagccggtggctaacgaa
gaacgtttggtaaacaagtccatgcgtctgctggatgatcgcaagttctgggctggaata
gtgtttcctgacatgcagtccaacacgtctgatctgccgcccaacatcaactacaagata
cgcatggacatcgataatgtggagcgcactaacaagatcaaggatggatattgggatccc
ggtcctcgagcggacccctttgaggatctgcggtacatctggggcggcttctcctacctg
caggatgtgattgaacacggaatcatacgagctctgacgggcagcaaggagaaaactgga
gtttacatccagcagatgccttatccctgctatgtggacgatgttttcctgcgggtaatg
agccgctccatgcctctgttcatgactctggcctggatgtactcggtggccatcatcatc
aagggtgtggtgtacgagaaggaagcacggctcaaggagaccatgaggattatgggtttg
gataatggcatcttgtggctgagctggttcatcagtagtctcataccactgctcatcagc
gccgccctgctggtgctcatcctgaagatggggaatctcctgccgtacagcgaccctggc
gtagtctacttgttcctggcctcctttgccgtagtgaccatcatgcagtgtttcttgatc
agcacgcttttctctcgcgctaacctcgccgcggcctgcgggggcatcatatacttcacc
ctctaccttccatatgtgctgtgcgtggcctggcaggattacgtgggctttggtgccaaa
gtagtagtgagcctcttgtctccggtggcgttcggctttggctgcgagtatttcgctctg
ttcgaggagcagggtgtgggcatacagtggagtaacctgctctccagccccatgcaggag
gacagctacaatctcaccacttccatctcgctcatgctcttcgactctgtgctgtacgcc
atcatgacctggtacatcgaagctgtgtttccaggccagtatggcatcccacgtccctgg
tacttcccattcaccaagtcctactggtgtggagagaaatgtggttgggttacagcagcg
ccgaccaacaagaaagaaaatgctgaagctgtatgcattgaagaggaaccagcccacctg
gatccaggtgtttacatcgagaacctggtgaaggtctacagcaatggcaaactggcagtg
gatggtttgactctaggtttttatgagggtcagatcacctccttcctgggtcacaatggc
gctggaaaaaccacaaccatgtctatcctcactggcctgttcccacccacctcgggcact
gcttacatccagggcaaagacatccgcaccgatctgagcgctatacgtcaaaacttgggc
gtgtgtccgcagcataacgtcctctttagcatgctcaccgtggaggaacacatctggttt
tatgcacgtctgaagggtttgcctgaggagaaggtgcagtctgagatggagcagattgtg
atggacctcggcctgcctcataaacgcaaatcacgtagcaaccagctctcgggaggaatg
cagaggaagttatcagtagcactggcgtttgttggagggtcaaaggttgtgatcctggat
gaaccgactgccggagttgatccttacgctcgccgtggcatctgggatctgctgctgaag
tatcgtccaggccgcacgatcatcctgtccacccaccacatggacgaagctgatatcctg
ggggatcgtattgccatcatctcccatgggaagctgtgctgtgtgggttcctctctgttc
ctcaagacccagctgggaacgggatactacctgacgatggtgaagaaagactttgatctc
tccgcaagctcctgccgtacttccagcagcaccgtctcctattctaaaggaagtctcaag
aaggaggacagtgtatctgagagcagttcggatgctgggctgggcagcgaccacgaaagc
gaaaccaccaccatagatgtttccctgatctccaatgtgattttcaagcacgtccctaca
gccagactagttgaagatatgggtcacgagatcatgtacgttcttccttacgagtctgcc
aaagccggagcgtttgttgagctcttccatgagatcgacgaccggctcaccgacctcggc
atttccagctatggcatctctgacaccacgctggaagagattttcctcaaagtggcagaa
gacagcggcgttgatgctgaagtgtcagatggaactctacctgcacgaaggaaccgcaga
cacgcttttggtgaccatcagagctgcctgaagcctttcactgaagacgactttgatttc
aatgactcagaaggtgatccagaatcacgtgagacggactggttgggcggcgctgatggt
aaaggttcgtaccaggtgaagggctggagtctgaagagacagcagtttgtggctttgctc
tggaaacgcttcctgtatgcccgacgttcccggaaaggtttctttgctcagatcgtgctt
cctgctgtgttcgtgtgcatcgctcttgtcttcagtctcattgtccctccttttggaaag
tatcctagtctcgctctggagcccagcatgtatgaggagcagttctccttcttcagcaat
gatgcacctgaggacaggcatacaaacgggttacttgaagctctaatggacagtccggcc
tacaaccagcaatgcacagatcagcagaacgatgttagcaaatcatgtccgattaaagat
ggagagtgggtggttccagagattcccgagaccgttcaggacattttcctaaaagggaac
tggagtatggaaaacccatcccctctgtgcgagtgcagttgcgaaggaaggaaaaagatg
cttccggagtgtccgcctggagcaggaggtctgccaccccctcagattaaagtcactgct
gctgaaactttgcagaatctgacaggcagaaacatttctgactacttggtgaaaacatac
gcacagattattgggaaaagcttgaagaacaagctctgggtcaacgaattcagatatggt
ggattctcattgggtgccagaagctcacaagccctccccgatggcgacgaggtcgccgat
gccatcgctcatattcgtaaccgcttcagtcttcaagcgggtacagcatctgaccgcttt
ctgggaagcctgtccacttttatccaaggtcttgataccaagaacaatgtaaagatctgg
ttcaataataagggctggcacagtattggatcgttcctcagtgtcatgaacaatgccgtc
ctgcgtgctaatctgcctcccggccaggagcggtccaaattcggcatcaaagctttcaac
catccgctcaacctcaccaaagagcagctctcacaggtggcgctaatgacaacctcagtc
gacgtgctggtgtccatctgcgtcatattcgccatgtccttcgtcccggctagctttgtg
gtgttcctcatccaggagagagtgaataaagccaaacacatgcagttcatcagcggagtg
cagcccttcctctactggctagccaactttgtttgggacatgtgcaactacattgtcccg
gcaacccttgtcatcattatcttcatctgtttccaacaagaggcctatgtgtcttccacc
aatcttcctgttcttgccctcttgctgttgctctatgggtggtccataacacccctgatg
tacccggcgtcattcttctttaagattcccagtacagcatatgtggttttgaccagcgtt
aacatcctcattgggataaatggcagcgtatccacatttgtcctggagcttttcggcagc
aacgagattggaggcatcaacaacatcttgaagaacgtgttcctgatcttccctcacttc
tgtctgggcagaggtctcattgacatggtgaagaaccaagctatggctgacgccctggag
agatttggtgagaatcgattccgctctcctctggcgtgggacatggtgggcaagaatctc
tttgctatggccatagagggcgtgattttcttctgcatcactgtccttatccagtaccgt
ttctgcatcaaggctaggccggttagcactaagctgaagcccatcggagaggaggatgag
gatgtggccagagagaggcagaggattctgggtggaggaggacatactgatattctggag
ctcaaacagctcaccaaggtgtataagaggaagcagaagccagctgtcgacagactgtgt
gtgggaatcccaccaggagagtgttttgggttgctcggtgtgaacggagctggaaagaca
agcaccttcaagatgctcacaggagattcagttgtcactagtggagaggcctacttggca
ggaaaaagcgtgctgacagagattgatgaagtgcatcagaatatgggctactgtccacag
tttgatgccatcaatgacctgctgactggccgagaacatctggagttttacgccatcctg
cggggcgtccccgagaaagaagtgtgcgaggtggcggattggggcattcgtaaactgggt
ctgatgaagtatgtagacaaagcggcaggaagctacagcgggggaaacatgaggaagctt
tccaccgctatggcgctcattggaggaccaccagtggtgttcttggacgaacccaccact
gggatggaccccaaagcccggcgagccctgtggaactgcatcctcagcatcattaaagag
ggacgctcggtcgttctgacctcacacagtatggaggagtgtgaagctctctgcactcgt
atggccatcatggtgaacggcaggttccgatgcctgggcagtgtgcagcacttaaagaac
aggtttggtgacgggtacaccatcatcctgcgggtggcgggagccaatccgcagctggag
ccggtgatggagttcatcgagcgggagctgccgggcagcaccctgaaggagaagcacagg
aacatgctgcaataccagctgccctcgtcgctgacctccctcgcccgcatcttcaacatc
ctctccaagaacaaagagcagctccacatcgaggactactccgtcacgcagaccacttta
gaccaagtatttgttaattttgccaaggaccaaacagatgaggaccacttgaaagacatt
tccattcacaaaaacgatgccgttgtggacatttctcaactggacgccttcctcatagac
cagaaggccaaagagtcagtggtgtga
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integrated database retrieval system
