Megalobrama amblycephala (Wuchang bream): 125271878
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Entry
125271878 CDS
T08212
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03420
Nucleotide excision repair
mamb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125271878 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
125271878 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mamb03051
]
125271878 (rad23aa)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125271878 (rad23aa)
Proteasome [BR:
mamb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
125271878 (rad23aa)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
125271878 (rad23aa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
OTU1_UBXL
UBA_2
Dsc3_N
DUF1421
Motif
Other DBs
NCBI-GeneID:
125271878
NCBI-ProteinID:
XP_048052125
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Position
LG7:16734746..16743657
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AA seq
360 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDDDQTVKALKEKIEAEKGRDSFPVAGQKLIYAGKILQDDTPIK
EYKIDEKNFVVVMVSKTKAAGPPAPPSEAPKSVAAPSSSSSSSSPPPPPPPPAPAAIPIP
SDEHLDDPPATVSPTQSPDDRTGQVADGEDASSTLVTGQEYDAMLTNIMSMGYDRDRVVA
ALKASYNNPHRAVEYLLNGIPTVPVQETRPAPVQLPTDTQPPEGENPLEFLRSQPQFHSM
RQVIQQNPSLLPALLQQLGQENPELLQQISQHQELFIQMLNAPVDEGEAGEGAEFGDLGA
IGDEAAPGSYIQVTQQEKEAIERLKALGFSEALVVQAYFACEKNENLAANFLLNQNFEDE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacactgaagactctgcagcagcagaccattcaaatagacatcgacgatgac
cagacggtgaaggcattgaaagagaagattgaggctgagaagggccgagacagttttccc
gtagcaggacagaagctcatctatgccgggaaaatcctgcaggatgacacacccatcaag
gagtataaaatcgacgagaagaactttgtggtggtgatggtgtcaaagacaaaagcagca
ggaccccccgccccaccctcagaagcacccaaatctgtcgcagcaccttcctcttcctcc
tcctcctcctctcctcctcctcctcctccccctccagcccctgcagccatccccatcccc
agtgacgagcatttagacgacccgcctgcaactgtctcgcctacacagagccccgacgat
cgcacaggtcaggtggctgatggggaagatgcgtcttcaacattagtgacaggtcaagag
tacgacgccatgctcacaaacattatgtctatgggctatgatagagatagagtggtggct
gcgctcaaggccagttataacaaccctcaccgtgctgtggagtatctgctcaatgggatc
cctactgtcccagtgcaggagacccgtcccgctccagtccagctccccacagacacacag
cctcctgaaggcgagaaccctctggagttcctgcgctctcagccacagttccacagcatg
aggcaggtgatccagcagaacccatccttactgccggccctcctgcagcagctgggccag
gagaaccccgaactactgcagcaaatcagccaacatcaggagctcttcatccagatgttg
aacgcgccagtggacgagggcgaagccggagagggggcggagtttggagatctgggtgct
atcggtgacgaggcagcgcccgggagttacatccaagtgacgcaacaggagaaagaagcc
atcgagaggttaaaagctctggggttttcagaagctctggtggtccaggcgtactttgcc
tgcgagaagaacgagaacctggccgccaacttcctgctcaatcagaatttcgaggacgaa
tga
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