Megalobrama amblycephala (Wuchang bream): 125271994
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Entry
125271994 CDS
T08212
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125271994 (sox1b)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125271994 (sox1b)
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Peripla_BP_4
Motif
Other DBs
NCBI-GeneID:
125271994
NCBI-ProteinID:
XP_048052423
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All DBs
Position
LG7:complement(20968928..20971517)
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AA seq
338 aa
AA seq
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MYSMMMETDLHSPGAQTNTNTGHTGPNSKVNQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LAGGLLAGSGGGGGVGLGMGAAGVGQRLESPVGHGGSTAASYAHMNGWTNGAYSGQVAAA
AAAAAMMQEAQLAYSQHPGSGAHHHHGHHHHPHNPQPMHRYEMTALQYSPISNSQSYMSA
SPSGYGGISYTQHQNSSVASSGAIGSLGSLVKSEPSVSPPVTAHSRAPCPGDLREMISMY
LPTAEAGDPSVQSRLHAVPQHYQSSTTSVNGTVPLTHI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggacttgcattctccaggagcccagactaacacaaac
acgggccacacgggacccaacagcaaagttaaccaagaccgcgtcaagagacccatgaac
gcgtttatggtgtggtctcggggtcagcgcagaaaaatggctcaggagaatccaaagatg
cacaactcggagatcagcaagcgcctcggagcggagtggaaagtcatgtccgaggcggaa
aagcgacccttcattgacgaggcgaaaagactgcgcgccatgcacatgaaggagcatccg
gattacaagtaccgaccccggaggaagaccaagaccctgctcaagaaggacaagtactct
ttggcgggtggcctgctcgctggatcaggaggcggaggcggcgtggggctgggaatgggt
gcagcgggggtcgggcagaggttagagagtccggtgggtcacggcggcagcaccgcggcg
agctacgcgcacatgaacggctggaccaacggcgcgtactcaggccaggtggcggctgcc
gcggctgcagccgcaatgatgcaggaggctcagctcgcctacagtcagcacccaggcagc
ggagcgcatcaccaccacgggcaccaccaccatccgcacaacccccagcctatgcaccgc
tacgaaatgacggctctccagtacagccccatctcaaactctcagagctacatgagcgcc
tctccgtcaggctatgggggaatatcctacacgcaacatcaaaactccagcgtggcttca
tctggggccatcggctcgctgggctcgctggtgaaatcggagccgagcgtaagccctcca
gttaccgctcactctcgagccccttgtcccggagacttgcgagagatgataagcatgtat
ttaccgacggcggaggcaggggacccgtccgttcagagcagacttcacgctgttccgcag
cactatcaaagttccacgacgagcgtaaacggaaccgttccactgacacacatatga
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