Megalobrama amblycephala (Wuchang bream): 125272023
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Entry
125272023 CDS
T08212
Symbol
ddx39aa
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125272023 (ddx39aa)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125272023 (ddx39aa)
Spliceosome [BR:
mamb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125272023 (ddx39aa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125272023
NCBI-ProteinID:
XP_048052522
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All DBs
Position
LG7:21719351..21728184
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQTAVDSAVPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSNVKCAVFFGGLSIKKDEDVLKKSCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaacgatgttgataatgagctgttggactacgaggaagacgaggagccgcag
accgccgtggacagtgcagtcccagccggcaagaaggaggtgaaaggctcctacgtctcc
atacacagctccggcttccgcgatttcctcctgaaaccagagctgctccgagcgatcgtc
gactgtggctttgaacatccttcagaggtccagcatgagtgcattccacaagccatcctt
ggcatggacatcctgtgccaggcgaagtctggtatgggaaaaactgccgtatttgtgctt
gccacactccaacagatcgagccagtggatgggcaggtttctgtgttggttatgtgccac
acacgtgaactggccttccagatcagtaaagagtacgagcgcttctcaaagtacatgtcc
aacgttaagtgtgccgtcttcttcggtggcttgtccataaagaaggatgaggacgtattg
aagaagagctgtcctcatattgtggtgggaacaccagggaggatccttgccctcattcgc
aacaagaccttgaacctcaaaaatgtcaaacactttgtattggatgaatgcgacaagatg
ctggagcagctggatatgagacgggatgtccaggatatcttcagactgacgcctcacgag
aagcagtgcatgatgttcagtgccacattaagtaaagagatcagaccggtctgtcgcaaa
ttcatgcaagacccaatggaggtgtttgttgatgatgagactaagcttacactccatggt
cttcagcagtactatgtcaaactgaaagacagcgagaagaaccgcaaactgtttgaccta
cttgacgttcttgagttcaaccaggtggtgatatttgtcaagtccgttccacgctgtgtg
gctctttctcagctgctggtggaacagaatttccctgccattgcgatccacaggggaatg
gctcaggaagaaagattgtcccggtatcaacagtttaaagattttcaacggcggatcctg
gtggctactaatctgtttggtcgtgggatggatattgagcgtgttaatatagttttcaac
tatgacatgcctgaggactcggacacatacctacacagggttgctcgtgctggtaggttt
ggcacaaaaggactggccatcacctttgtatcagatgagacggatgcaaagaccctgaat
gatgtgcaggaccgttttgaagtcaacgtagcagagttgcctgaggaaatcgacatctca
acctacatcgagcagtccagatga
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