KEGG   Megalobrama amblycephala (Wuchang bream): 125272031
Entry
125272031         CDS       T08212                                 
Symbol
smu1b
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mamb03041]
    125272031 (smu1b)
Spliceosome [BR:mamb03041]
 Complex B
  Other components
   Complex B specific factors
    125272031 (smu1b)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR3_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 LisH_TPL Beta-prop_WDR75_1st ANAPC4_WD40 WD40_Gbeta Beta-prop_EML WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_Aladin Ge1_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F PROPPIN Beta-prop_WDR75_2nd Beta-prop_RSE1_2nd Beta-prop_DCAF12 VPS8_N LisH LisH_PAC1 LisH_WDR26 DUF7899 DUF7165
Other DBs
NCBI-GeneID: 125272031
NCBI-ProteinID: XP_048052533
LinkDB
Position
LG7:21852043..21871988
AA seq 544 aa
MDLEVESADVIRLIMQYLKENNLHRTLATLQEETTVSLHTVDSIDSFISDINNGHWDIVL
LAIQYLKLPDKLLIDLYEQIVLELIELGELGAARCLLKQTDPMIMLSHTQPERYSHMENL
LTQPYFDSQVAYPVGSSKEKRRLAIAQAFAGEVCLVPPSRLMALLGQVCYLYGRICEGAL
YRLQETKALRQFGSLAMLSLKWQQHQGLLPPGMSLELFRGKGALKDMEEERFPTQLSRLI
KFGPKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDEAVLC
LAVSHDSDMIASGAQDGKIQVWRILNGTCLNRLERAHSKAVTCVCFNKDSSQLLSASFDQ
IIRLHGLKSGKTLKEFRGHTSHVNEVIFSHDGHHVISASADGTVKVWNMKTLDCTHTIQT
PDIPEGTDITVNNVVLVPKTPEHFVVCNRTNTVVVTNIHGQVMRSFCSGVRRGGDFVCCT
LSPRGEWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVIGITHHPHQNLIATYSEDGLLK
LWKP
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggacctggaagtggaatccgcagacgtgattcgcttgatcatgcaatatctgaaggaa
aataatttgcaccgcactctggcgacgcttcaagaggagacgaccgtctcgctccacacg
gtcgacagcatcgacagcttcatctccgatatcaacaacggccactgggatatagtgttg
ctcgcaatccagtatctgaaacttcctgacaagctgctcatagacttgtacgaacagatt
gtgctggagttgattgagttgggagagttgggagcagcccggtgtttactgaagcaaact
gaccccatgatcatgcttagccacacccaacctgagcgctactcgcacatggagaacctt
ctcacccagccatactttgactcacaagtggcatatccagtgggcagcagtaaagagaag
cgcagactggctatcgctcaagcttttgcaggagaggtctgtttggtgccaccttctcgt
ctcatggctcttctgggccaggtttgctacctttatggccgtatatgtgaaggggctctg
tacaggttacaggagaccaaagcactaaggcagtttggctcattagcaatgctgtctctg
aagtggcagcagcaccaaggtctcctacctccaggtatgtcattggaactgttccggggc
aaaggtgcattgaaggacatggaggaagaacgctttcctactcagctcagtcgcctcata
aagtttgggccaaaatcccatgtagagtgtgctcgattctctcccgatggacagtatttg
attactggctctgttgatggtttcattgaagtctggaacttcaccactggtaaaattcgg
aaggatctgaagtaccaagctcaagacaatttcatgatgatggatgaggctgtgctgtgc
ttggcagtaagtcatgactccgacatgatcgcctctggagctcaggatggaaagatacag
gtttggagaattctgaatgggacatgcctgaatagattagaacgagcccacagcaaagca
gtcacctgtgtctgcttcaacaaggacagcagtcaactattaagtgcctcctttgaccag
atcatcaggcttcatggtttgaaatcaggaaagacgctgaaggagttcagaggccatacg
tctcatgtaaatgaagtcatcttctcacatgatggccatcatgtcattagcgcatcggca
gatggcacggtaaaggtctggaacatgaagacactggattgcacccacacaatacaaact
cctgacattcctgagggtacagacatcactgttaacaatgttgtgcttgtcccaaagact
cctgagcactttgtggtgtgtaataggaccaacacagtggttgttacgaacattcatggc
caggtgatgaggagtttctgttcaggcgtaagaaggggaggagactttgtttgctgcacg
ttgtctccacgtggagagtggatttattgcgtgggagaggactatgtgctgtactgcttc
agcaccatcactggcaagctagagagaaccctcacggtacatgaaaaagatgtgattggc
ataactcaccacccccatcaaaatctcatcgccacatacagcgaggatggcctactcaaa
ctctggaagccatga

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