Megalobrama amblycephala (Wuchang bream): 125272163
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Entry
125272163 CDS
T08212
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125272163 (htt)
04131 Membrane trafficking [BR:
mamb04131
]
125272163 (htt)
03029 Mitochondrial biogenesis [BR:
mamb03029
]
125272163 (htt)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125272163 (htt)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125272163 (htt)
Mitochondrial biogenesis [BR:
mamb03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125272163 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_ECM29
OKR_DC_1_N
Motif
Other DBs
NCBI-GeneID:
125272163
NCBI-ProteinID:
XP_048052758
LinkDB
All DBs
Position
LG7:complement(27310765..27371992)
Genome browser
AA seq
3122 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPLSAEELVQKQKKDLATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDKESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNAASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRITKRQEETVQETLSSSIPKI
MSALGHFANDGEIKMLLKAFVANLKSSSPTIRRTAASSAVSVCQHSRRTHYFYTWLLNVL
LGLVVPVDEEHSSHLILGVLLTLRYLMPLLQQQAPNTSLKGSFGLVRKEADVTPAPEQLI
QVYELTLHYTQHWDHNVVTASLELLQQMFRTPPPELLNALITCGKITHTSVFREETECRA
RSGSILELIAGGSTCSPLLLRKQKGKLLSGEEEGLEDDPERAEVTTGSFTASVGGDSSSE
APSSSGVSSLGTSDIITEQPRSSQHALQPGDSVDLSASEQGVGPDTPDEEDEEDMLSRSS
SGGAGVVSTSGDLITDVNQMSVGAASSSPPSDSSQTTTEGPDSAVTPSDCAELVLDGSES
QYSGMQIGTLQDEEEEGAAPQPDKPPEPFSQSALALSKPHLLEGKGHNRQSSDSSVDRFI
PKEEVLEPAELDNKPSKIKGDIGHYTDPKEEPLVHCVRLLAASFLLTGQRNGLVPDNEVR
VSVKALAVSCVGAAAALLPEAFFNLLYLQPLDGQQPDEQQYISDILQYIEHGDPQIRGAT
AILCGALIQAIQLKTRYNTEIWLSQIHCVTGNSVTIENFVPLLQRSLKDESSVTCKMACA
AVRHCIMALCNGSLSELGLQLLIDLMTLKDCSYWLVRTELLETLSEIDFRLISFLERKTE
KLHKGEHHYTGLLRLQDRVLNDVVLYLLGDDDPRVRHVAANTIGRLVPRLFYDCDQAQTD
PVVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYNLCQNAPDVTIENNLSRVITA
ISHALTSSTSRAMTFGCCEALYLLSSTFPVCTWSTGWHCGFVSSSVFHLNRSSQYRSRGR
SFSLSQSGSSEEVRRSLTVGVAGMVLSLLSSAWFPLDLSAHQAALLLAGNLLAAIAPKCM
KSPWAGEEETNPAPSKVEEPWPALNDRSLVVMVEQLFSHLLKILNICAHVLDDTPPGPAV
KATLPSLANTPSLSPIRRKGKEKEMTEPSNTPMSPKKGGETNTGRAADSTATAAVNKSTT
MGSFYHLPPYLKLYDALRATHANYKVTLDLHNTNEKFGGFLRSALDVLSQLLELATLHDI
GKCVEEILGYLKSCFSREPTMATVCVQQLLKALFGTNLASQYEGASSHPCRSQGKALRLG
STSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQDASGWFDVMQKVSNQLRSNIT
NVTRHRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLAQLVQLRVNYCLLD
SDQVFIGFVLKQFEYIEVGQFRDSEEIVPNIFFFLVLLSYERYHSKQIISIPKIIQLCDG
IMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELETQKEVVVSMLLRLVQHHQVLE
MFILILQQCHKENEDKWKRLSRQIADIILPMIGKQQMHLDSHEALGVLNTLFETVAPSSL
RPVDMLLKSMFITPSTLASVGTGQLWVSGILAILRVLISQSTEDIILSRIQELSLSPYLL
SCPTICRLCDDDSSPPEAPPTTMEDANGEPQRFPPEETFARFLLQLVGVLLDDIATKQVK
VDMSEQQHTFYCQQLGTLLMCLIHIFKSGMFRRITAAGSRLLKAEGGEGGHFYTLEGLNS
LVLQLITTHPSLVLLWCQVLLIINYTNYTWWSEVHQTPRRHSLSSTKLLSPHSSGEEERP
EGKLAMCNREIVRRGALILFCDYVCQNLHDSEHLTWLTVNHVSDLISLSHEPPVQDLISA
VHRNSAASGLFIQAIQSRCDNLSTPVMLKKTLQCLEGIHLSQSGALLMLYVDKLLNTPFR
VLARMVDTLACRRVEMLLAETLQNSVAQLPLEELDRIQQYLQTSGLAQRHQRFYSLLDRF
RATVAEDTTSPTAPITTHPLDGDPPPPPENVEPNKEWYVALVKSQCCLRGEGALYENTEL
LTKLPQSDLNTIMTCKDFNLCLLASCLSVGVQRVCKDHGAVLFDTAQQVAFDRLAGVIEL
LPSPHQPLLASAKTCTDYWQKLNQVYGEPGFYQTVLSLCGVLSQYLLSLSKLPSSLHIPK
DRETLITTFSTLAIEVVVWRLLQDQLPLSVDMQMSLSCLCLALQQPAVWTHFASHSYLTH
TCSIIHCIELLIHAVAVGPGDQLLRPERKTSQTDQSEDQLDSADNQREWRCCVIMAELVE
GLQSVLALGHHRNKNIPAFLTPTLQNVIISLARLPLVNSYTRVPPLVWKLGWSPRPSGDF
GTALPEIPVEFLQEKDVFREFLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEET
QQEEDLERTQINVLAVQAITSLVLSAMTLPTAGNPAISCPEQQPRNKILKALDTRFGRKL
SVIRGMVEREIQAMVSKRDNIATHFPYQAWDPVPSLSSSTAGTLISHEKLLLQINTEREM
GNMDYKLGQVSIHSVWLGNNITPLREEEWGEDEEDEADAPAPASPPLSPINSRKHRAGVD
IHSCSQFLLELYSQWILPGSPSSKKTPVVLISEVVRSLLAVSDLFTERNQFDMMFSTLTE
LQKVHPPEDEILSQYLVPAICKAAAVLGMDKAIAEPVCRLLESTLRSTHLPSRIGALHGV
LYVLECDLLDDTARQLIPTVSEYLLSNLKAIAHCVNLHNQQHVLVMCAVAFYMMENYPLD
VGPEFNAGIIQLCCMMLSATEEATPSIIYHCVLRGMERLLLSEQLSRMDAETLVKLSVDR
VNMPSPHRAMAALGLMLTCMYTGVAGEEGKEKGSPGRPADADPTAPDSESVIVAMERVSV
LFDRIRKGFPSEARVVARILPQFLDDFFPLQDVMNKVIGEFLSNQQPYPQFMATVVYKVF
QTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHVISRM
GKSDTVDISLFCLVAMDFYRHQIDEELDRRAFQSVFEMVASPGSPYYQLLCCLQSIHQDT
SL
NT seq
9369 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctaatgaaagcgtttgagtcgcttaaatcattccagcagcag
caaggcccgctgtcggccgaggagctcgtccagaaacaaaaaaaagaccttgctacaacc
aaaaaggacagagtgactcattgcctgacgatatgtgaaaacatcgtggcacagtcgctg
aggacatctccagagttccagaaactgcttggaattgctatggaaatgttcttgctgtgc
agcgacgacaaggagtctgacgtcaggatggtggcagatgagtgcctaaacaaaatcatc
aaagcattgatggattccaacttgcctagactgcagcttgaactgtacaaagagattaaa
aagaatgctgcctctcggagtctgcgggcagccctgtggaggtttgctgagcttgctcac
ctggtgcgtccacagaaatgcaggccgtaccttgtgaatctgctgccatgtctgacacgg
atcacaaaacgtcaggaagagactgtgcaggaaactctttcttcttcaattcctaaaatc
atgtctgcccttggacacttcgccaatgacggagagatcaagatgctgctgaaggctttt
gttgccaatctgaagtctagttctcccactattcgccgaacagcggccagctcggctgtc
agtgtgtgtcagcactcacgcagaacacactacttctacacctggctcctcaacgtgctt
ctcggtttggtggtgccagtggatgaggaacattccagtcacctgattctgggtgtatta
ctgacgttgcgctacctaatgcctcttcttcagcagcaggctcctaacactagcctgaag
ggcagctttgggcttgttcgtaaagaggccgatgtcacccctgcacctgagcaactcatt
caggtctatgaactgaccctgcactacacacagcactgggatcataatgtggtgacggca
tctttggagcttcttcagcagatgtttcgcactcctccccctgaactcctgaacgcgctc
atcacatgtggcaaaatcacacacaccagcgtcttcagagaagagacagagtgccgtgca
cgcagtggcagcatcctcgagcttattgccggtgggtcaacatgcagtcctctcctcctc
aggaagcagaaaggtaagctgttgtcgggtgaagaagagggtttggaggatgaccctgag
agggcagaggtcaccactggatccttcactgcctcggtcggtggcgatagctccagtgaa
gctccctcatcatcaggcgtttcgtctcttggcacatctgacatcatcacagagcagcca
cggtcctcccagcatgccttgcagccaggggactcagtggacctgagtgcatcagagcag
ggtgtagggcctgatactccagatgaggaagatgaggaggacatgctaagccgcagctca
agcgggggcgctggggtcgtcagcacgtctggcgacttaataaccgatgtcaaccagatg
tcagtgggagccgcgtcatcgtcgccccctagtgacagttcccagacgactacggagggg
ccggactccgccgtgacgccttcagactgcgccgagctcgtgctggacggcagtgagagt
cagtactcagggatgcagatcggcacactgcaggatgaagaagaggagggtgcagctcca
caacctgataaacctccagagcctttctctcagtcggcactggctttaagtaagccccat
cttctggagggaaaaggtcacaacaggcaatcatctgacagcagtgtggatcgattcata
ccaaaggaagaggttctggaacctgcagaacttgacaacaagccatctaagattaaagga
gatattggtcactatactgacccaaaggaagagcctctggtgcactgtgtccggctgttg
gctgcctccttcctgctcaccggccaaagaaatgggctggttcctgataatgaggtgcgt
gtgagcgttaaggcgttagccgttagctgtgtgggggcagcagcagctcttctacctgaa
gccttctttaacctactctacctgcagccactagatggacaacaaccagatgagcaacag
tacatcagtgatatactgcaatacattgaacatggagatcctcagatcagaggagccacc
gccatcctgtgtggggctttaatccaagccatccagctcaagacacgctacaacacggag
atatggctgtcccaaatccactgtgtcacaggtaactctgtgacaatcgaaaactttgtt
cctctgctgcagcgaagtctaaaagatgaatcttcagtcacgtgtaaaatggcctgtgct
gctgttaggcactgtatcatggcgttgtgtaatggcagtctcagtgaacttggcctgcag
ctgctcattgatctgatgaccctgaaggactgctcttattggctggttcgcactgagctc
ttagagacgctttctgagatagatttccggttaataagttttttggagagaaaaactgag
aagttgcacaaaggagagcatcactacactgggttgttgaggctacaggacagagttctg
aatgatgttgtgctttatctactgggcgatgatgacccacgtgtgagacatgtggcagca
aacaccatcggcaggttggtgcccaggttgttctatgactgtgaccaggctcagacagac
ccagttgtggctatagcacgagatcagagcagtgtgtacttgcagctgctgatgcacgag
acccagcctccatcacagtttactgtcagcactatcacacgaacataccgtggctacaat
ctgtgccagaacgcgccggatgttaccatagagaacaacctatctcgggtcatcactgcc
atctcccatgccctcacctcctccacttccagagccatgacttttggctgttgtgaggct
ctgtaccttttgtccagcaccttcccagtgtgcacctggagcacaggctggcactgtggc
tttgtgagctcttctgtctttcatctcaaccgctccagccagtaccgcagccgaggacgc
tcctttagtctgtctcagtctggaagtagtgaagaggtgcgcaggtctctgacggttggc
gtggccggtatggttttgtctctcctctcctctgcttggtttcctcttgatctctccgcc
catcaggctgctcttctactggctggaaaccttcttgcggctattgcaccaaagtgcatg
aagagcccatgggccggtgaggaggaaactaaccccgccccctctaaggtggaggagccg
tggcctgcccttaatgaccgttctctggttgttatggtggagcaactgttctcgcacctg
ctaaagatcctaaacatctgcgcccatgtgctggatgacacacctccaggccctgcagtc
aaggctactttaccctcattggccaacactccctctctcagtccaatcagacggaagggt
aaagagaaggagatgacggagccaagcaacacccccatgagcccaaagaaaggaggagag
accaacacaggcagagcagcagacagcacagcaacggcagcggttaacaagtccaccact
atgggcagcttttatcaccttcctccttatctgaagctttatgatgcactgagagctaca
cacgctaactacaaagtcacattagaccttcacaacaccaatgagaagtttgggggtttc
ctgagatcagcgcttgatgtcctttcacagctgcttgagttggccaccctgcatgatatt
ggcaaatgtgttgaagagatcctgggctaccttaagtcctgtttctcacgggaacctact
atggccaccgtgtgtgttcagcagcttttgaaggcgttgtttgggaccaatcttgcctct
cagtatgagggggcttcatctcacccgtgtcggtcccagggcaaggccctccggctcggc
tcgaccagcgttagacctggcctctaccattactgcttcatggccccttacactcacttt
acccaggcactcgcagacgccagcctcagaaacatggtgcaagctgaacaagaacaggat
gcctctgggtggtttgatgtcatgcaaaaagtctccaatcaactgaggtcaaacatcacc
aatgtcactcgccatcgaggagacaagaatgccattcataatcacatccgtttgtttgag
ccgctggtgattaaagctctgaagcagtacaccaccagcacctcagtggccctgcaaaga
caggtgctggacctactcgcccaacttgtgcagctccgggtcaactactgtttgcttgat
tcagaccaggtattcattggtttcgtgctgaagcagtttgagtatattgaagtggggcag
ttcagggactctgaagagattgtgcccaacattttcttcttcctggttctgctgtcctat
gagcgctaccactccaaacagatcatcagcatcccaaagatcattcagctgtgtgatggc
atcatggccagtggcaggaaggcagtaacgcatgcaatccctgcactgcagcccatagtg
cacgacctctttgtgctgagaggctccaataaagcagatgcaggaaaagagctggaaact
caaaaggaagtggtggtgtccatgcttctacgcctcgttcagcaccatcaggtgctggag
atgtttattctgatcctacagcagtgccataaagagaacgaagataagtggaagaggctt
tcacgacagattgctgacatcatcctgccaatgatcggcaaacagcaaatgcacctggac
tcccatgaggcattgggtgtgttaaacacactgtttgagacagtggctccctcctctctg
cgacctgtagacatgctactgaagagcatgttcatcacaccatctacccttgcatcagtg
ggtacggggcagttgtgggtgtctgggattctcgccatcctgcgtgtcctaatctcgcag
tccacagaggacatcattctgtctcgtattcaggaactttcactgtcaccatacctcctc
tcctgtcccactatctgtcgactgtgtgacgatgactcctcccctcctgaagctccgcct
actaccatggaagatgccaatggggagccgcagcgtttccctcctgaggaaacatttgct
aggttcttattgcagttggtgggggtgttgctggatgatatcgccacaaagcaggtgaaa
gttgacatgagcgagcagcagcacacgttctactgtcagcagctgggcacactgctcatg
tgtttgatccacatcttcaaatcaggaatgttccggcggatcacggcagcgggcagcagg
cttctgaaggcggagggaggggaagggggtcatttttataccctggagggtctgaacagc
ctggtgctccagctcataaccacacacccatctctggtcctgctctggtgtcaggtcctt
ctcatcatcaactacaccaactacacctggtggtccgaggtgcatcagacccccaggagg
cacagtctgtccagcactaagctgctgagcccgcactcatctggagaggaggagaggccc
gaggggaagctggctatgtgtaacagagagattgtccgacgaggagcccttatcctcttc
tgtgactatgtgtgtcagaacctgcacgactctgagcatctgacgtggctgactgtaaat
cacgtgagcgatctgattagtctctcccatgagcctccagtgcaggatctcatcagtgct
gtgcaccgaaattcggcagccagcggactcttcatacaggccatacaatcacgctgcgac
aacctttctactccggtgatgctgaagaagaccctgcagtgtctggagggcattcatcta
agtcagtctggggctctgctcatgctatacgtagacaaactactcaacacgccgttccgt
gtgctggctcgcatggtggatacactcgcctgcagacgtgtggagatgctgcttgcagag
accctgcagaatagtgtcgctcagctaccactggaggagctggacaggattcagcagtac
ctacagaccagtggccttgcacaaaggcatcagcggttctactccctgctggacaggttc
agagccactgttgctgaagataccacaagccctactgcacccattaccacacacccactg
gatggtgaccctccccctccccctgaaaatgtggaacccaataaggagtggtatgttgct
ctggtgaaatctcagtgttgtttgagaggtgaaggagctctgtatgaaaatactgagctc
ttgacaaaacttccccaatctgacctaaacacaatcatgacctgcaaggacttcaacctg
tgtctgctggcatcatgtctgagtgttggggtacagagggtatgtaaggatcatggggcg
gttttatttgacactgctcaacaggtggccttcgatagattggctggtgtcatagagctc
ctcccctcgcctcatcagcccctcctcgcctccgctaagacgtgtacggactactggcag
aagcttaatcaagtatacggtgagcctgggttttatcagactgtgttgagtctgtgtggc
gttttgagtcagtacctgctgtctctgtccaaattgccgtcctcactgcacattcccaaa
gacagagagacactcattaccaccttcagcaccctcgccatagaggtggtggtttggcgt
ttgctgcaggatcagctgcctctgagtgtggacatgcagatgagtctgtcgtgtctgtgt
ctggctctccagcagccggcggtgtggacacactttgcctctcactcctacctcacacac
acctgctccatcatccactgtatagagctcctcatccacgcagtcgctgttggtcctggc
gaccaacttttaaggccggagaggaaaacatcacaaacagaccagtcagaagaccagttg
gactctgcagacaaccagcgtgaatggcggtgttgtgtgatcatggctgagctggttgaa
ggtctacagagtgtgctggctctgggtcaccatagaaacaagaacatcccggcattcctt
acgcccaccctacagaacgtcattatcagcctggccaggcttccccttgtgaacagctac
acccgagtcccaccactggtctggaagctgggctggtcccccaggccgagtggagatttt
ggcacagcattaccagagatccctgtagagttcctgcaggagaaagatgtcttcagagag
ttcctctatcgcattaacactctgggctggagtagtcggacacagtttgaggagacgtgg
gccactttgttgggggtgctggtcactcagccaatcacgatggaccaagaggaggaaacc
cagcaagaggaggatctggagaggactcagataaatgtactggcggttcaggccatcacc
tctctggtgctgagtgccatgactctgccgacagcaggaaatccagctatcagctgtcct
gaacagcaaccccgcaacaaaatccttaaagctctggacaccaggtttggtcgtaagctg
agtgtgattagaggtatggttgagcgtgagattcaggccatggtgtcaaagagagacaac
attgccacacacttcccttatcaagcctgggaccctgtgccctctttatcttcctcaaca
gcaggcactctcatcagtcatgagaaactcctgctgcagattaatacagaaagggagatg
ggcaacatggactacaaactgggccaagtgtcgattcactcagtatggttgggaaataac
atcacccctctgagggaggaggagtggggtgaggatgaggaagatgaagcagatgctcca
gcacctgcatcaccaccattatcaccaatcaactccaggaagcaccgtgctggggttgac
atccactcctgctctcagttcctcctggagctgtacagccagtggattctccctggcagc
ccaagcagcaagaagactcctgttgtgctaatcagtgaggttgtcagatcgctgctggca
gtgtctgatctgttcaccgagaggaatcagtttgatatgatgttctccactctgactgag
ctgcagaaagtccatccaccagaagatgagatcctcagccagtaccttgtgccagctatc
tgcaaagcagccgcagtgcttggcatggataaagccattgcagagcctgtgtgccgtctt
ctggagagcaccttgcgcagcactcatctgcccagtcggatcggtgctcttcatggagtt
ctgtacgtgctggagtgcgatctgctggacgatacagcacggcagcttatccctactgtc
agtgaatacctgctctccaaccttaaagctatagcacactgtgtgaatctacacaaccag
cagcacgtgttggtgatgtgtgccgtggcattctacatgatggagaactaccccctggat
gtagggcctgagttcaatgccgggatcattcagctgtgctgtatgatgctgtctgctacc
gaggaggccacaccatccatcatctaccactgcgtcctgcgaggtatggagcggttgctt
ctgtccgagcagctgtcgcgaatggacgcagagacgctggtcaagctgagcgttgaccgt
gtgaacatgcccagcccacaccgtgccatggctgccctgggtctcatgctcacctgcatg
tacacaggtgtggctggagaggaagggaaggagaagggaagtcctgggcgccctgctgat
gcagaccccacagctcctgatagcgagtcagtcattgtcgcaatggagcgggtatctgtt
ctgtttgacaggattcgtaaaggctttccaagtgaggcacgagtggtagctcggatcctt
cctcagttcctggatgactttttcccactgcaagacgtcatgaacaaagtcattggagag
ttcctgtccaatcagcagccttacccacaattcatggctacagtggtctacaaggtattt
caaacacttcatgcaactgggcagtcctccatggtccgtgattgggtgctactctcgctg
tcaaacttcacacagagaacacctgtcgccatggcaatgtggagcctgtcctgtttcttt
gtcagtgcctcgaccagccaatggatctctgccctcctgcctcatgtcatcagtcgcatg
ggaaagtctgacacagtggacattagcctcttttgtctggttgctatggatttctaccga
caccagatcgatgaggagttagaccgcagggccttccagtctgtctttgagatggtggct
tcacctggtagtccgtattaccaactactgtgctgtttgcagagcattcaccaagacacg
tcactataa
DBGET
integrated database retrieval system
