Megalobrama amblycephala (Wuchang bream): 125272183
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Entry
125272183 CDS
T08212
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125272183 (ssrp1b)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125272183 (ssrp1b)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
125272183 (ssrp1b)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
125272183 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
HMG_box
POB3_N
SSRP1_C
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
125272183
NCBI-ProteinID:
XP_048052811
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All DBs
Position
LG7:complement(27757425..27787392)
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AA seq
703 aa
AA seq
DB search
MSDTLEFNEIYQEVKGTWNDGRLRFSKQTVVFKNSKTGKVDSISVSELTQAQWRRVCLGH
GIKLCSSTGHIYKYDGFKDTDLEKISEYFKANYKVELMEKDMSVKGWNWGTAKFNGPLLS
FEVNDSPAFEIPLSSVSQCATGKNEVTVEFHQNDDTEVSLMEVRFYVPPTTGDEGSDPVE
AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMNEDEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKATSGLLYPLERGF
IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEKKGMKGNDNMYSDSDDDQHDAYLERMKEEGKIREEANDSDDSEGESD
ESFNPGEEDDEIAEEYDSKASASESSAEGGDSDEDRKKKPAKKAKFVKERKPRKKEKKAK
DSSAPKRPMSAYMLWLNASRDRIKSEHPGISVTEISKKAGEMWKQIGKDKKEEWEGKAEE
AKKEYERAMREYKESGGGSSGSSKKEMKKKGGKNEEKKKRKSGGGREKEKERATGNDSFK
SREFISSEESSSESEKGKGRKRKGSDDEEEVVSTPPSSESGSD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacactctggaattcaatgaaatttatcaggaggtcaagggcacctggaatgat
ggccgtctgcgcttcagtaagcagacagtggtgtttaaaaacagtaagaccgggaaggtg
gacagcatttcggtctctgagctcactcaggcccagtggaggagagtctgtctgggtcac
ggcatcaaactgtgctccagcactggccacatctacaaatatgatggcttcaaagacact
gaccttgagaagatctcagagtacttcaaagccaactacaaagtggagctgatggagaaa
gatatgagtgtgaagggctggaattggggcactgctaaatttaatgggccattgctttca
tttgaggtgaatgacagtcctgcatttgagattccactctccagtgtatcccagtgtgct
acgggaaagaatgaggtcactgtggagtttcatcagaatgatgacacagaggtatccctc
atggaggtgcgcttctacgtcccacccaccacaggagacgagggttcagaccctgtggag
gcatttgctcagaacgttctgtctaaggcagatgtcatccaggctacaggagatgctgtg
tgtatcttcagagagttgcagtgcctcacacctaggggcaggtacgatatccgtatttat
ccaacattcctccatctgcatggtaaaacatttgactacaagatcccatacaccacagtg
ctccgccttttcctgttgcctcacaaagaccagcggcagatgttctttgtgatcagtctg
gacccgcccattaaacagggtcagacccgctatcattttctcattcttctgttctccaag
gaagaggacatcagcctcactctcaacatgaacgaggatgaggtggagagacgttttgaa
ggaaaacttaataaaaacatgtctggctctctttatgagatggtcagcagagtcatgaag
gccctggtcaacaggaagatcacagtgcctggaaatttccaaggtcactcaggagctcaa
tgtataacatgttcatataaggccacttcagggctgttgtatcctttggaaagaggtttt
atctatgtacacaagcctccggtgcatctgcgctttgaagagatcgcctgcgtgaacttt
gcccgtggaaccaccaccacccgctccttcgatttcgagattgagaccaagcagggcaat
cagtacaccttcagcagcatcgagagggaggaatatggtaaactctttgactttgtcaat
gctaagaagttaagcatcaagaacagaggctttaaagagaaaaagggtatgaaaggtaat
gacaacatgtacagcgactcagacgacgaccagcatgatgcatacctggagcgcatgaaa
gaagagggcaagatccgtgaggaggccaatgacagtgacgactcagagggcgagagtgat
gaatcttttaatcctggagaagaagatgatgaaattgcggaggagtacgacagtaaggcc
tctgccagtgaaagcagcgctgagggtggggacagtgatgaagaccgcaagaagaaacca
gccaagaaagcaaaatttgtaaaagaaagaaaaccacgcaagaaagagaaaaaggcaaag
gatagcagtgcccccaagagaccaatgagtgcctacatgctctggctgaacgctagcaga
gaccgcattaaatcagagcacccaggcatctctgtcacagagatctcaaaaaaagctgga
gaaatgtggaaacaaattggcaaagacaagaaagaggagtgggaaggaaaagcagaggaa
gcaaagaaagagtatgaacgagcgatgagagagtacaaggagagtggtggaggatcttca
ggcagctcaaaaaaggagatgaaaaagaaaggagggaagaatgaagaaaagaagaaaagg
aagtcaggtggtgggagggagaaagagaaggagcgagcaacaggcaacgacagctttaaa
agtcgagagttcatatccagtgaagagagctcatcagagtcagaaaaaggcaagggacgg
aagcgcaaggggtctgatgatgaagaggaagtggtcagcacaccgccaagctctgagtcg
ggctcagactga
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