Megalobrama amblycephala (Wuchang bream): 125272437
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Entry
125272437 CDS
T08212
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125272437 (toporsa)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125272437 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mamb03037
]
125272437 (toporsa)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125272437 (toporsa)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125272437 (toporsa)
UBL E3 ligases
125272437 (toporsa)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125272437 (toporsa)
Cilium and associated proteins [BR:
mamb03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125272437 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
125272437
NCBI-ProteinID:
XP_048053212
LinkDB
All DBs
Position
LG7:36291513..36295878
Genome browser
AA seq
879 aa
AA seq
DB search
MASPQIKERPSCVVLNTISKAASPESKCPICLDHFKNISYLDVCLHKFCFCCIHEWSKNK
AECPLCKQPFNSIYHTIKSEDNYKRFDLRPTENGSFGNMAGQRFRYRTTLTGDRRPAPRR
TSPPPDHGVIFEGLRGSVPQRHNRDLHSMIRRMAVRQRRESEGRSVQSLHEQEVVKFRRA
LYRRGVRVQSVQDGGRIRETSAEFFKRNPACLHRLVPWLRRELTVLYGTHGSLVNIVQHI
IMTLITRHNLDDQAVLHELRPFLLSHTEHFLHEFLSFAQSPFNMEAYDQRAVYDLPRPSG
ESSSSDTSVIAISEDESDSLVSGAQDYATPRVTLSQIAWDDETPGPSYSSEPSQVLPFHV
RDSDSDSSVGEAVASVTAVPHQDRPANTATIAVEEEDSPGSDDDCFIIGYVKPVAERTPE
LVQLSSDSEHSEQNAELQSPRASQHIRFTSESDLSPTVTQRPLVRPTRCSRSPDDTTTHL
RKEDKYGKRHHERELSGSREGSSHSNRTHSSSCSRKHPLSKESKHKWNQGKETSRHSSSY
WHSYSHYSQQGSSRRCYTETSSSYTSYYRSVYDRSHSRSHRRRRSRDREDRSNSRSTSRI
KSSSSSCHERRHSRSNSKTNSSHRRHRSHSESHSRIKSFNHQERSRSRSSSRIKSSSSNC
QDRSYSKSSSRYNFSNRDVKSRSRSNSRINSSNCQDRSRSRSNSRINSNSSHQTSLHDEY
GRKRKYKTKHYEEPSRKSPSKLFADSAEEGGKKKNKKHHKRFKRKSRSPSVDDKSEGHSR
KHHKKKKKKHKKKSKRHNSEGRVGKHSPVLITINSDSDNADPSEPSTSNVCAASSTFTIA
NSATETQLLQSSFLDMEQQSTTGTEYSSVGDAGNHIQTD
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccacagataaaggagcgtccatcatgtgttgtgttaaacacaatatcaaaa
gcagcatctccagaatcaaagtgcccaatatgcctggatcactttaaaaacatatcatat
cttgatgtgtgcctacataagttttgcttctgctgcattcatgagtggtcaaagaataaa
gcagaatgccccttatgcaagcagccatttaattctatttatcacaccattaaatctgaa
gataactacaagaggtttgacctgcgaccaactgaaaatggctcatttggcaacatggca
gggcaaagattcaggtatcgcaccacacttacaggcgaccgaagaccagcaccgaggaga
acgtctccccctcctgaccatggtgtcatatttgagggcctgagaggatctgtaccacag
cgacacaacagagatctccatagcatgataaggaggatggcagtaaggcaaagaagagag
agtgagggcaggtcggtgcaaagccttcatgaacaagaagtggttaaattcagacgagct
ttgtacagaagaggagtgcgagtccaaagcgtgcaggatggtggccgtatcagggagacc
tctgcagagttctttaaaagaaatcctgcttgtctccacaggcttgtaccttggttgaga
cgagagttgactgttctgtacggcacccatggttcccttgtcaatatagtgcagcacatc
atcatgactctgatcactcgacataacttggatgaccaggctgttctacatgagcttcgt
cccttcttactgtcccacacggagcacttcctgcatgagtttcttagctttgctcagtcc
ccgttcaacatggaggcatatgaccagcgtgctgtttatgacttgcctcggccctccgga
gagagtagcagttcagatacatctgtgattgccatttctgaggatgagagtgattcttta
gtgtcaggagcccaggattatgccactcctagggtgaccttaagccaaatagcatgggat
gatgagaccccagggccatcctactcttcagagccatctcaggtattacctttccacgtg
agggattcagactctgatagtagtgtaggggaagcagtagcatctgttactgctgtacca
catcaggaccgtccagcaaatactgccactattgcagtggaagaggaggattcccctggc
agtgatgacgactgctttattattggctatgttaagccagtggcagaaagaacaccagaa
ctggtccagctttcttctgattccgaacattctgagcagaatgcagagctgcaaagccct
cgagcatcccaacacattcgttttacttcagagtctgatttgtcacccactgtcactcag
agacccttggtgaggccaacaaggtgctctcgctcacctgatgacaccactacacacctt
agaaaagaagataaatatggtaaaaggcatcatgaaagggagttgtcgggatctagagaa
ggatcctcacacagcaacaggacacactcttcctcttgtagcaggaagcacccattgtct
aaagagagcaagcataagtggaaccaaggaaaggagacaagtcgccacagctcttcttat
tggcattcatatagccattatagtcagcaaggcagcagcaggagatgttatacagagaca
agctcatcctacaccagctactacagaagtgtatatgatcgctctcattctcgatcacac
agaagaaggcgaagcagggaccgtgaggacagaagtaactcaaggagcacttccagaatc
aagtccagctcctctagctgtcacgaaagaagacactcaaggagcaattctaaaaccaac
tcttcacaccgtcgtcacagaagtcactctgagagccattctagaatcaagtctttcaat
catcaggaaagaagccgctcaaggagcagttctagaatcaagtccagctcctccaattgt
caggacagaagttactcaaagagcagttcaagatacaacttctccaatcgtgacgtcaaa
agccgctcaaggagcaattctagaatcaactcttccaactgtcaggatagaagtcgctca
aggagcaattctagaatcaactccaactcctcacatcagacatcactgcatgatgaatat
ggcaggaaaaggaagtacaaaacaaagcattatgaggaaccctcaaggaagagtcctagt
aagttgtttgccgattctgctgaagaaggtgggaaaaagaaaaacaagaagcatcacaaa
aggttcaagaggaaaagtaggagtccaagtgtagatgacaaatctgagggtcacagtagg
aaacatcacaagaagaagaaaaagaaacacaagaagaagagcaagagacataatagtgag
gggagggtgggaaagcatagccctgttctcattacaataaatagtgacagtgacaatgct
gaccctagtgaaccttcaacaagtaatgtctgtgcagctagctccacttttacaatagca
aacagtgctacagaaactcagctgctccagtccagtttcctagacatggagcaacagtca
actactggaactgaatatagttcagtgggtgatgcagggaatcacatccagactgattaa
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