Megalobrama amblycephala (Wuchang bream): 125272483
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Entry
125272483 CDS
T08212
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125272483 (pcdh10a)
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Protocadherins
125272483 (pcdh10a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
CDC13_N
Motif
Other DBs
NCBI-GeneID:
125272483
NCBI-ProteinID:
XP_048053278
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All DBs
Position
LG7:37383459..37406502
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AA seq
1001 aa
AA seq
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MILIFLFFSILDGGLSQLHFSVPEEQERGTVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVNERIDREEICRQTVPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDITVEITESATPGTRFPVENAFDPDVGTNALNTYAITTNNYFYLDVQTQGDGNRFAE
LVLDKPLDREQQAVHRYVLTAVDGGQPQRTGTALLVVKVLDSNDNAPTFDQSVYSVSLRE
NSPVGTLVIQLNATDMDEGQNGEIVYSLSSHNPPRIRDLFNIDSRTGRIEVTGEVDYEES
STHQIYVQAKDMGPNAVPAHCKVLVKLIDVNDNTPEISFSTVTESVSEQAAPGTVIALLS
VTDRDSGENGQMTCELHGEVPFKLKSSFKNYYTIVTDSPLDREKAESYTLTVVAKDKGVP
SLSTSKSIKVHVSDENDNAPRFMQSVYDVYVTENNVPGAYIYAVSAVDPDVGQNAYVTYS
ILECEIQGMSILTYVSINSENGYLYALRSFDYEQIKEFSFMVHAKDSGAPELTANATVNV
IIVDQNDNAPSIIAPLGKNGTAREHLPRSAEPGYLVTRIVATDADDGENARLSYSILRGN
ELGMFRMDWRTGELRTARRVSSKRDPPHPYDLLIEVRDHGQPPLSSSASINVVLVDSVVE
GRSGDRGSVKSKEGSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYTCMAGDS
CCQCCSRQARGRKKKLSKSDIMLVQSSNVASTAQVPVEESGSFGSHHQNQNYCYQVCLTP
ESAKTDLMFLKPCSPSRSTDTEHNPCGAIVTGYADQQPDIISNGSILSSETKHQRTELSY
LVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGHTAGADLFSNCTEECKAL
GHSDRCWMPSFMPGDSRQGADYRSNLHVPGMDAVPDTEVQESVVPGDACNRADDRSFSTF
GKDKSHHGTLTRHELHTLLPSARAPYKPNYLCEYSLKMYDF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatatttctctttttctcgatcttggatggagggttatcgcagctgcacttc
tcggtaccggaggagcaggagcgcgggacggttgtgggaaatatcgccgaagatctgggg
ctggacatcaccaaactttccgcgcgccgttttcagaccgtgcctagctcgcgcacgccg
tacctggaggtcaacttagagaacggagcgctggtggtgaacgagcgcatcgaccgagag
gagatatgtcgccagaccgtcccgtgcctcctgcacctcgaagtgtttttggagaacccg
ctcgagctgttccgcgtcgagatcgaggtcatggatattaacgacaatccgccgagtttc
ccagagacggacatcaccgtggagatcaccgagagcgccacaccgggcacccgcttcccg
gtggagaacgccttcgaccctgatgtggggactaatgccttgaacacatacgccatcacc
accaacaactacttttatttggacgtacagacgcagggcgacggcaaccgtttcgcggag
ctcgtgctggataaacccttggaccgagagcagcaggcggtgcacaggtacgtgctcacc
gccgtggacggagggcagccgcagaggaccggcactgcacttctagtggttaaagtactg
gactcaaacgacaacgcgcccacgttcgatcaatccgtttactctgtgagcttgcgcgag
aactctccagttggcacgctcgttattcagctcaatgccaccgatatggacgagggccag
aacggagagattgtttactctctaagtagtcacaatccgccgcgtattcgggatctgttt
aacatcgactcgcgcactgggaggattgaagtgaccggtgaggtggattacgaggagagc
agcacgcatcagatctacgtgcaggcgaaagacatggggccgaacgccgtgcccgcgcac
tgcaaagttctggtcaaactcatcgacgtcaacgacaacacgccagagattagtttcagc
acggtcacggagtcggtaagcgagcaggctgccccgggcacggtgatcgctctgctgagc
gtcactgaccgggactccggcgagaacggacagatgacctgcgagctgcacggcgaggtt
ccgttcaaactcaagtcgtctttcaaaaactattacacgatcgttacggacagtccgctg
gatcgcgagaaagcggagtcgtacacgctcacggtggtcgccaaagacaagggggtgccc
tctctctccacgagcaagtccatcaaagtgcacgtctcggacgaaaacgacaatgcacct
agattcatgcagtcagtttacgacgtgtacgtgacagagaataacgttccgggcgcttac
atttacgcggtgagcgcagtggaccctgatgttggacagaacgcctatgtcacttactcc
atattggagtgcgaaatacagggtatgtccatcttaacctacgtgtcaatcaattctgag
aacggctacttgtacgctctgcgctcttttgattacgagcaaataaaagagttcagtttc
atggtgcacgccaaggactctggtgcgcccgagttaactgccaacgccaccgttaatgtc
atcatagtggaccagaatgacaatgcaccgtctataattgcacctttgggcaaaaacggc
accgcgagggaacatttaccccgctcagccgagccgggatacctggtgacccgtattgtt
gccacagatgctgacgatggtgagaacgcgcgcctgtcgtacagcatcctccggggaaac
gagctcgggatgttccggatggactggagaaccggcgagctacgtaccgcgcgccgggta
tccagcaaacgggacccgccgcacccgtacgacctgttgatagaggtgcgcgaccatggc
cagccgccgctctcgtcctccgcgagcatcaacgtcgtgctcgtggacagcgtagtggag
ggccggagcggcgaccgggggtcggtgaagtccaaagagggctcgctggacctcacactc
atcctcatcatcgctctcggctccgtgtccttcatcttcctcctcgccatgatcgtgctg
gcggtgcgctgtcagaaggacaagaaactgaacatatacacgtgcatggccggagactcg
tgctgccagtgctgcagtcgccaagcgcgcgggcgcaagaagaagctcagtaaatcggac
atcatgctcgtgcagagcagtaatgtggccagcaccgcacaggtgccggtggaagagtcg
ggcagcttcggctcgcaccaccagaaccagaactactgctaccaggtgtgcctgacaccg
gagtctgccaaaaccgacctgatgtttctcaaaccgtgcagcccgtcccggagcacagac
acagagcacaacccgtgcggggcaatcgttaccggatacgccgatcagcaaccagatatc
atctctaacggaagcattttatcgagcgagactaaacaccagagaactgagctcagctac
ctggtggatagaccccgtcgtgttaacagttcagcgtttcaagaggcagatatcgtcagt
tctaaagacagcggacatggagacagcgagcagggagacagcgaccatgacgccaccaac
cggggccacacagcaggagctgatcttttctccaactgcactgaagagtgcaaggctctg
ggtcactccgaccgttgctggatgccctccttcatgcctggcgacagtcgccagggcgcc
gattaccgtagcaacctgcacgtcccaggaatggacgcggtgccggacactgaggtacag
gagagcgtggttccgggtgatgcgtgcaatcgggccgatgatagatcattctctacgttc
ggcaaagacaagtcacaccacggcacgctcacacgccatgagctacacacactcttacca
agcgcccgagcgccttacaaacccaactatctgtgtgagtactcactcaaaatgtacgat
ttctga
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