Megalobrama amblycephala (Wuchang bream): 125272575
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Entry
125272575 CDS
T08212
Symbol
rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125272575 (rnf38)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125272575 (rnf38)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125272575 (rnf38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
125272575
NCBI-ProteinID:
XP_048053462
LinkDB
All DBs
Position
LG7:41773325..41811622
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AA seq
678 aa
AA seq
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MPIATTGHSTSREPRVCSPDPVPKRADLCEDAGAQPAEYRGSEGGHSLGSTRLSGALESS
SAVSHSPPTSPFHHHHHHHHHHPHPVTMEPPRTRSRSRSGFYHGGLSNSNGNAGSGGGAL
SPAGGISHHQHHHQQQQQQQFGAAHGHTENLRPPGSMLSPGAHRHAGPGMHRNSGAGAMG
GVYHYHSEHACADATDKTEDSPSPKRQRLSQQSVLEFTSAPPSTPSPPIRPWELPPSRRP
HPYPHPHYHPERCHTPARHRRSPPVRRQRGRRERLSRHHPPHGSPGGGQDENYRHPPHPH
SLHPYGQPPSHPPPGLDEPRAFHPPTLSPRLLHPPQQGAMVMDLHEQLPQGTVPVSYTVS
PVPPHGLPAPLCTGQHLPACSSQQQVPACSVVFSGQQHYPICSVPPPMLPACSVQHLPVP
YAFPSLLSSDPPFLLHPPHLSHHPPHLPTPGQFLPFQTQQSRSPLQRIENEVELLGDHLS
VGGGFNYPHSGHPSPLPPSTPLQFLSHEPLPQELFGVPYPHFMPRRITGRRYRSQQAVPP
PPYHPSLLPYFLWYRSVLPVQPTAVGPAISLELDVDDGEVENYEALLNLAERLGEAKPRG
LTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKAN
RTCPICRADASEVQRDSE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgccactactggtcattcaacgtctcgagagccccgcgtctgttccccggac
cccgttcccaagcgtgctgatttatgcgaggacgcaggggcccagccagcggaatacagg
ggttcggaggggggccacagcctgggcagcactagactttctggagctcttgagagctcc
tctgcggtatctcattcccctcccacttcccctttccaccaccaccaccatcatcatcat
catcacccccatccagtgactatggagccccccaggactcgatctcgctcgcggtctgga
ttttaccacggtggattatctaactcgaatggtaatgctgggagtggcggtggtgcgcta
agtccagctggaggaataagccaccaccaacaccaccaccaacagcagcagcagcagcag
ttcggcgctgctcatggacacacggaaaacctgcgcccacccgggagcatgctttcccca
ggcgcccacagacacgcagggcctggaatgcacagaaactccggagcaggtgcaatggga
ggagtataccactatcattcagagcatgcatgtgcagacgccactgacaagacggaggat
tctcctagtccgaagagacagcgtctttcccagcagtctgtattggagtttacctcggcc
cctccttccacaccctcgccaccaatcagaccatgggagcttccgcccagtcgcaggcca
cacccctatccccacccacactaccaccccgagcgctgccacacacctgcacggcacaga
cgcagtcctccagtgcggcgtcagcgtggccgacgagagcgtctgtcacggcaccatccc
cctcatggttcccccggtggggggcaggatgaaaactaccgccaccctcctcacccacat
tctcttcatccctatggccagccaccatcccaccctccacccggccttgatgagcctcgg
gcctttcacccccccacgctctcgccacggttattgcacccgccacagcagggtgccatg
gtgatggacctccatgagcagcttcctcagggtacggtgccggtatcatatacagtttct
ccagtgccgccccatggtctacctgctcccctctgtacgggacagcatctcccagcatgc
tcttctcagcagcaggtgcctgcctgttctgtggtcttcagcggacagcaacactatcca
atctgtagcgtaccacctccaatgttgccggcatgttcagtgcagcatttgccagtgccg
tacgcatttccatctcttctctccagtgatccacccttcctgcttcatcctccgcatctg
tcacatcatccgccccacctccccactcctggacagttcttacccttccagacgcaacag
tctcgatctccactgcagaggatagagaatgaggtggagttgttgggggatcacctgtca
gtaggtggagggtttaactatcctcactctggccatcctagtcctctgcctccttctacc
ccactgcagttcctctcccatgaacccctgccccaggagctctttggagtgccgtatccc
cacttcatgcctcggcgaatcacaggcagacgctaccgctctcagcaggccgtacctcca
cctccgtaccacccaagtctgctgccctacttcctgtggtacagatctgttcttccagtc
cagccgacagcagtgggccccgccattagcttggagctggatgtagatgatggagaggtt
gagaattatgaggctctgttaaaccttgctgagcgtctcggagaagcaaagcctagaggt
ttgacgaaagccgacatcgaacagctgccttcctacagattcaaccccagcaaccatcag
tctgagcagactttgtgtgtagtgtgcatgtgtgatttcgagtctcgtcagctgttgaga
gtactgccctgtaatcacgaattccatgccaagtgtgttgataaatggctcaaggctaac
agaacctgtcctatttgccgagcagatgcctctgaagtccagcgggattccgagtga
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