KEGG   Megalobrama amblycephala (Wuchang bream): 125272636
Entry
125272636         CDS       T08212                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mamb03036]
    125272636 (kdm4c)
Enzymes [BR:mamb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     125272636 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     125272636 (kdm4c)
Chromosome and associated proteins [BR:mamb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125272636 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD Tudor_3 Tudor_5 Rad9_Rad53_bind LBR_tudor
Other DBs
NCBI-GeneID: 125272636
NCBI-ProteinID: XP_048053593
LinkDB
Position
LG7:43599077..43629886
AA seq 1505 aa
MAGVGESAPANPACKIMTFRPTMEEFKDFNQYLVYMESQGAQRAGLAKVIPPKGWKPRRN
YDDIDDFVIQAPIQQMVAGQSGLFTQYNIQKKPLTVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGTLYDEDIEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKSCEAFL
RHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASIRWID
YGKVATQCTCSKDMVKISMDPFVRRFQPDRYQAWTQGKDSCPLDHTLATPSTTPELQSWL
QRRRRKAPSTTSLHYSRTCSKRLKTVDTAPVKGGSRRSRGAALTSKDKEDEDPVKHQKES
QYSTELKGLTGPCRQMCVVKVTRVESDLLAHSTTQVKDASPERLSTPPLTSTSSQSDPDP
GHASSQTSVNLDEGRVSTNTVSTAQPGPEPTSESDITVDVTLDSERTAESPNQTDCESVS
EIIAPSVPVTHSQRRSSTGAAVLFSESDSHQAKIETEVTVADILTESSIDYGTSALYKEQ
SSIRLHSALQGSETLENRTNFEIQTSSFCEMPLLMPELTEERVNPHSLAPEMPSLTLAVR
PESTSHRPHSPSSTAPVLHLEKSHSPPVITGDVGTCSEKACPNWPFVVPQEGVRQSHNST
SDTFIAKPASPSLVTHWEPPEESKQEGHEHTCPSTDQNTQHESISQFKITTHSILQCSTV
ADMDFIDAHNSEMTDNSAERGDKQTSLTLEEQTSSLTSSQGPFVESKPFTIWKNLSSQNP
AVLIESLQPELVMGLTTGVSSLTEYAHDSLPYTMWSESGCQQEKFPDSPNSSPCTQTWTN
LEPIPMQCSSADVSLNTPLDLKQQNVEVESAEACVLSEQTGSQEPLGEDFKGQEYYEGVK
SEHDGSVSDSDSCESVDKGADSSSESSEENAMSDPEYVEPGLEPGEVCTYHMQTVKKTTK
SWRHPLRKPTARAVPSAVKQQAASDDETVEECETKEEEPETEEWAKPLVHLWQHRKAHLQ
YEREYNTTAAQTAPHCAVCTLFMPYYQPENLEERRHDVLMSAATESQGSCSQEAGLRSRP
LIPEICFAYQEGPCPLNTLLEEDGSSPLVACNSCCVQVHASCYGVAVHDVGPVWTCDRCV
SGDFAAGCCLCNLRGGALKRTSDDRWAHVMCAVGLPEVKFIDVVKRAPIDISAIPVQRYK
LKCIYCRNRIQKLSGACIQCSCGRCPTSFHVTCAHAAGVPMEPDDWPYVVFITCHRHQSR
SSSAKVKVSRSELEVGQTVISKHKNLRYYSSRVTQVTAQTFYEVMFDDGSFSNDTFPEDI
VSRDCARLGPPEVGEAVQVKWPDGLFYGAKYLGSNTSYMYQVEFEDGSQVLAKREDIYTL
DEDLPKKVKGRLSTASSMRFQDAFFTTQGERKRRRTPNSRFQTDYIAHISPRTFARISET
RSKAN
NT seq 4518 nt   +upstreamnt  +downstreamnt
atggcaggtgttggggaaagtgccccggctaaccctgcctgtaagataatgaccttcaga
cctaccatggaggagtttaaggacttcaaccaataccttgtttatatggagtctcaggga
gcacagcgtgctggcctggccaaggtaattccacccaagggctggaagccacgtcgcaat
tacgatgatattgatgatttcgtcatccaagcacctattcagcagatggtagctggccaa
tcaggactctttacccagtataacatccagaagaaaccgctcactgtgcaagaattccga
agactggccaacagtgacatgtactgcacacctcgctacctgaactatgaagacctggag
aggaagtactggaagaatctcacatttgtctcgcccatctatggtgctgacgtgagcggc
acactctacgatgaggatattgaagaatggaacatcgggcacttgaactcaatcttggac
gtgatcgaggaggactgtggtgtgtccattcagggagtaaacacaccctatctgtacttt
ggaatgtggaagaccagcttctcctggcacacggaggacatggacctctacagcatcaac
tacctgcactttggcgagcccaaatcctggtatgccatccctccagaacatgggaagaga
ttggagcgtctcgctacaggtttctttcctaacagttttaaaagctgtgaggcgttcctg
agacataagatgacactgatatccccctctgtactaaagaaatacagcataccatttgat
aagataacacaggaagctggggagtttatgatcacatttccgtatggttaccatgctggc
ttcaaccacggctttaactgtgctgaatccaccaattttgccagtatccggtggattgat
tatggaaaagttgccacgcagtgtacatgcagtaaggacatggtgaagatctccatggat
ccgtttgtcagacgattccagccagatcgctatcaggcttggacacaaggcaaagactca
tgtccattggatcacaccctggccacacccagcaccacaccagagctgcagagctggctt
cagagacgtcgcaggaaagcaccctccaccacaagtctccattattcacgcacatgctcc
aaacgattgaagactgtggacaccgcaccagtgaagggaggtagtcggaggagtagaggg
gcagctttaacatcaaaagacaaggaagacgaagacccagtgaaacaccaaaaagaatca
cagtactcaaccgaattaaaagggctcactggtccatgtcgacaaatgtgtgttgttaaa
gtaacaagagtggagagtgacttgctggcccactctaccacacaagtcaaagatgcttca
cctgagcgactctcgacccctccactcacctccacatccagtcagagtgaccctgatcca
ggtcacgcaagctcccagacatctgtaaatttggatgaaggtcgagtatccacaaacaca
gtttccaccgcacagcctgggcctgaaccaacctcagagagtgacatcactgtggatgtg
actctggactcagaaagaactgctgaaagtcctaatcaaacagactgtgaatctgtctca
gaaataattgcaccttctgttcctgtgacccattcacagagacgtagctccactggtgct
gcagttttattttcggaaagtgattcccatcaggctaaaattgaaacggaagtgacggtc
gctgatatcttgactgagagcagcatcgattacggcacatcagcactttacaaggagcaa
agctcgatccgtctgcactctgctcttcagggttcagaaactttggagaacagaacaaac
tttgaaatccagacttcttcgttttgtgaaatgcctcttctaatgcctgagctcacagaa
gagagagtcaatccccactctcttgcacctgaaatgccctcgctgactcttgctgtacga
cccgaatccacgagtcaccgacctcacagtccgagcagtactgcacctgttctccatctg
gaaaaatcacactcgcctcctgttataacaggtgatgtggggacttgttctgaaaaagct
tgtcccaactggcccttcgttgtaccccaagaaggtgtaaggcaatcacataactcaacc
tcagacacctttatagcaaaaccagcatctccttctttggtgacacactgggagccacca
gaggagtccaaacaggaaggacatgaacacacatgcccatccacagaccagaacactcaa
catgaatccatttcgcagtttaaaatcactactcacagtattttacaatgttctacagta
gcagacatggattttatagatgcccacaactctgaaatgacagataactcagcagaaaga
ggggacaaacaaacttctctgactcttgaagagcagaccagctctctcacgtcctcccaa
ggtcccttcgtggagtccaaacctttcaccatttggaaaaacctcagctcccagaatccc
gcagtgctaattgagagcttgcagcctgagctggtaatgggtcttaccacaggtgtaagc
agtctcacagaatatgcccatgactctctgccctacaccatgtggtccgaatcagggtgc
caacaagaaaagtttccagattctccaaactcttcaccatgcacccagacctggaccaac
ctggagcccattcccatgcagtgttctagtgcagacgtttctctaaacactcccttagat
ctcaagcagcagaacgtcgaggtggaatcagctgaagcttgtgtgctcagtgagcagacg
ggctctcaggagcctctcggggaagattttaaagggcaggagtattacgaaggtgtgaag
tcagagcatgatgggtctgtgagcgactctgattcgtgtgaatcggtagataaaggtgct
gacagcagcagtgaatccagtgaggagaacgccatgagtgacccagagtatgtggaaccg
ggcctggagccaggggaagtctgtacatatcacatgcaaactgttaagaagactaccaag
agttggcgtcacccccttagaaagcccacagcaagagcagtacccagtgctgtgaaacag
caggctgccagcgatgatgagactgtagaggagtgtgaaactaaagaagaagagccagaa
actgaggaatgggcaaagcctttagttcatctgtggcaacacagaaaagctcatcttcaa
tatgaacgagagtacaacacaactgcagctcaaactgctccacactgtgctgtctgcacc
cttttcatgccatactatcagcctgagaatttagaagagagaaggcatgatgtcttgatg
agtgctgccacagagtctcaggggtcatgttcacaggaggcaggcttgagatcgcgacct
ttgatccctgaaatttgctttgcataccaggagggcccatgccccttgaacacactactg
gaggaggatggatccagtcctcttgtggcctgcaacagttgctgtgttcaagttcatgcc
agttgctacggtgttgctgttcatgatgttggcccagtgtggacatgtgaccgatgtgtg
agcggagactttgcagctggatgctgtttgtgtaacctgaggggaggtgcactaaagaga
acatcagatgacagatgggcccatgtgatgtgtgctgtgggtcttccggaggtgaagttc
atagatgtggtgaagagagctcctattgacatcagtgccatacctgtacagagatataaa
ctgaagtgtatatattgccgtaacaggatacaaaagctgtctggagcatgtattcagtgc
tcatgtggccgttgccccacctctttccatgtcacctgtgcacacgctgctggagtgccc
atggagcctgatgattggccatatgtggtttttatcacctgtcacagacaccagtcacga
agctccagtgctaaagtgaaagttagcagaagtgaattagaagtgggccagacagtgatc
tccaaacacaagaatcttcgttactacagctcacgtgttacccaggtcacggcccaaaca
ttctatgaagtcatgttcgatgatggctcattcagcaatgatacattccctgaagacatt
gtaagcagagattgtgcccggcttggaccccctgaagtgggggaggctgttcaggtgaag
tggcccgatggacttttttatggagccaagtaccttggctctaacacttcatatatgtac
caggtggaatttgaagatggatcccaagtattggcgaagagagaggacatttatacactg
gatgaagatctgcccaaaaaagtcaaaggacgtttgtccacggcatccagcatgcgtttc
caagatgcgttcttcaccacacaaggtgaaaggaaaaggcgacgcactccaaattctcgg
ttccagacggattatatcgcccatatcagtcctcgaaccttcgccaggatctcagaaaca
cgcagtaaagccaactaa

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