Megalobrama amblycephala (Wuchang bream): 125272663
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Entry
125272663 CDS
T08212
Symbol
ifnphi1
Name
(RefSeq) interferon phi 1 isoform X1
KO
K05414
interferon alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04060
Cytokine-cytokine receptor interaction
mamb04217
Necroptosis
mamb04620
Toll-like receptor signaling pathway
mamb04621
NOD-like receptor signaling pathway
mamb04622
RIG-I-like receptor signaling pathway
mamb04623
Cytosolic DNA-sensing pathway
mamb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125272663 (ifnphi1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125272663 (ifnphi1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125272663 (ifnphi1)
04621 NOD-like receptor signaling pathway
125272663 (ifnphi1)
04622 RIG-I-like receptor signaling pathway
125272663 (ifnphi1)
04623 Cytosolic DNA-sensing pathway
125272663 (ifnphi1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125272663 (ifnphi1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
mamb04052
]
125272663 (ifnphi1)
Cytokines and neuropeptides [BR:
mamb04052
]
Cytokines
Interferons
125272663 (ifnphi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Foamy_virus_ENV
DUF4446
DUF447_C
DUF6706
STX6_10_61_N
Calmod_bind_M
Motif
Other DBs
NCBI-GeneID:
125272663
NCBI-ProteinID:
XP_048053644
LinkDB
All DBs
Position
LG1:complement(48177264..48180158)
Genome browser
AA seq
185 aa
AA seq
DB search
MNTKMKTQMWTYMFVILLTLQSQCSACEWLGRYRMISNESLSLLKEMGGKYSEDTKVSFP
GRLYNMIDNAEMEDQVKFLVLTLDHIIRLMDAREHMNSVQWNLQTVEHFLTVLNRQSSDL
KECVDRYHKPSHKKSYEKKINRHFKILKKVLKKKEYSAQAWEQIRRAVKHHLQRMDIIAS
IANRR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaagatgaaaactcaaatgtggacgtatatgtttgttatacttttaactttg
cagagtcagtgctctgcttgcgaatggctcggccgatacaggatgataagcaacgagtct
ttgagcctcctgaaggaaatgggtggaaaatattctgaggataccaaggtatcatttcca
ggacgcctgtacaacatgatagacaatgccgagatggaggaccaggtgaagtttcttgtc
ctgaccttagatcatatcatccgcctcatggatgccagagagcacatgaattcagtgcag
tggaacctacagactgtagagcattttctaactgtcctgaacaggcagtcatctgatctt
aaagaatgtgtggatcgataccacaagccatcacataagaagtcctatgagaaaaagata
aatagacacttcaagattttaaagaaggttctaaagaaaaaagaatatagtgctcaagca
tgggagcagatccggagagctgtaaaacatcatcttcagaggatggacatcattgcaagc
attgccaacagacgctaa
DBGET
integrated database retrieval system
