Megalobrama amblycephala (Wuchang bream): 125273420
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Entry
125273420 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125273420
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125273420
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125273420
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125273420
Ubiquitin system [BR:
mamb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125273420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
125273420
NCBI-ProteinID:
XP_048054708
LinkDB
All DBs
Position
LG8:3383347..3410741
Genome browser
AA seq
2569 aa
AA seq
DB search
MTATTRGSPVGGNESQSQAPDGQNQTLLPQNQTPSPNSSNETSPISPPEEPGQGEAPPAQ
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVRCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVVKLAQDWFPLLELLAMATNP
HCKFHIYNGTRPSESVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSVQALNVQIIAALIKPFGQCYEFLTLHTVKKFFSPVIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDSIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNVSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMENMRQFSKEHPGFDPQTVRVGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPTLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GSDDIATRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHISLVVRFPNQGRQVD
DLDIWSHTNDTIGSVRRCILNRIKANSTHTKVELFIGGEIVDPADDRRLIGQLNLKDKAL
ITAKLTQVSSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHLRYISF
LWQIADLGCTLNMPLLRDGARVLMKLMPPDTTTVENLRAICLDHAKLGENSLSPTLDSRF
FGPSPSQVLYLTEVVYALLMPATGTLGDDACDFQFNFLKSGGLPLVLGMLTRNNFLPNAD
METRRGAYLNALKIAKLMLTAIGFGHVKAVAEACQPVVEGTNPASPINQATHDQALVLQN
ALQSIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQKIVWASGCGMVHL
VFSSNEEISKIYEKTNAGNEPDPEDEQVCCEALEVMTLCFALLPTALDTLSKEKAWQTFI
IDLLLHCQSKAVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGSTAKERAKHAGDYF
TLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTSETGVEETILEGHLGVTKE
LLAFQTPEKKFYIGCEKGGANLIKELIDDFIFPASNVYLQYVKSGEFPAEQAIPVCSSPA
SINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEALTEWEYLPPVGPRPTKGFVGLKN
AGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDIDDDMSGDEKQDNESNVDPRDDVFSYH
HQFDDKPSLNKAEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLR
EQHDALEFFNSLVDSLDEALKALGHPTMLSRILGGSFADQKICQGCPHRYECEESFTTLN
VDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFD
YDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDEVPLESQVIPEDLPALTEPNGSS
RYRLVGVLVHSGQASGGHYYSYIVQRHGNGGDGQKDRWYKFDDGDVTECKMDDDEEMKNQ
CFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDAAGGDSELLKYISELTLXARPN
QPKMPLAIEASVRKQNVQFMHSRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEE
IAMISIQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRYSKNVRSWFAHNVLFAFPTR
FSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPAPVTSPGASTQACDSVTLSDHLLRA
VLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLSVPSTFMLVALDEGPGPPIK
YQYAELGKLYTVVSQLLRCCDVSSRMQSSINGNPPLANPYGDPNLAAPIMPLQQLVAEIL
FVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDL
LLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFTNCS
VAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYSYNNWSPPVQSNETSNGYFLER
SHSARMTLAKACELCPEEVSAQSVKPHQNTVLEPDDQEAPDEHDSSPPEDTALYPHSPGT
QYQQPNNHPHGQPYTGPAAQHMNNPQRPPQRPQESWEGTDEVPPVQTKE
NT seq
7710 nt
NT seq
+upstream
nt +downstream
nt
atgacggccactacccgcgggtcgcccgtggggggcaacgagagccagagccaagcgccc
gacggccagaaccaaaccctgctgccccagaaccagacgccctcaccaaactcctccaat
gagacgtcacccatcagtccaccagaggaaccgggtcagggagaagccccgcccgcacag
gaagaggaggagcctgccttcccccacacagacctggccaagctggacgacatgatcaac
cggccgcgctgggtggttccggtcctgccgaaaggagagctggaggttctgctggaagct
gctatagatctcagtaaaaaagggctggacgtgaggtgtgaggcctgtcagaggttcttc
cgcgacggcttgaccatctcattcactaagatcctgacggacgaggccgtgagcggctgg
aagtttgaaatccacaggtgcatcatcaataacacccaccgcctgatcgagctctgcgtg
gtcaaactggctcaggattggttccctctgcttgaactgctcgccatggcgaccaacccg
cactgcaagttccacatttacaacggcacgcgtccgtctgagagcgtccccgcaggagcg
cagctcgccgacgatgagctgttcgcccggccgcccgaccctcgatctccgaaggggtgg
ctcgtggacctcatcaataaatttggcacattgaacgggttccagattcttcacgatcgc
ttcatgagcgttcaggccctcaacgtgcagataatcgcagctctcatcaaacctttcggc
cagtgttacgagttcctgactttgcacacggtgaagaagttcttctcacccgtaatcgag
atggttccgcagtttctggagaacctcacagacgaggagctgaagaaagaggccaagaat
gaggccaagaacgacgctctgtccatgatcataaagtccttgaagaacttggcgtctaga
gttcctggtcaagaggaaaccgtcaagaacttggagatcttccggttgaaaatgatcctc
aggttgttgcagatttcctcgtttaatgggaaaatgaatgcgctgaatgaagtgaacaag
gtgatctcgagcgtgtcgtattacacacaccggcacggcaacccagaggaagaggagtgg
ctgacggcggagcggatggccgaatggattcagcagaaccacattctgtccatcgtgctg
agagacagtctgcaccagccgcagtatgtggagaagctggagaagatcctgcgcttcgtc
atcaaagagaaagctctgaccctgcaggacctggacagcatctgggcggctcaggcgggt
aaacacgaagcgatcgtcaagaacgtccacgatctgttggccaagctggcgtgggacttt
tccccggagcagctcgaccacctgttcgactgcttcaaggcgagttggacgaacgcaagt
aaaaagcagcgggagaagctcctggagttgatccgcaggctggcggaggacgataaggat
ggagtgatggctcacaaagtgctcaacctactgtggaacttggctcacagtgacgacgtg
ccggtggacatcatggaccaggccctgagtgcccacatcaagatcctggactacagctgc
tctcaggaccgtgacacgcagaagatgcagtggatcgatcggttcatcgaggagcttcgg
acgaatgataagtgggtgattccggctctgaagcagatcagggagatctgcagcttgttt
ggagaagctcctcagaacgtcagtcagacgcagaggagtccacatgtcttctaccgtcac
gatctgatcaaccagcttcagcacaatcacgcgctcgtcacgctggtggccgagaacctg
tctgcgtacatggagaacatgaggcagttctccaaagagcatccagggtttgatcctcag
acggtgcgagtgggcagccggtacagccatgtacaggaagtgcaagagagactcaacttc
ctgcggtttctgctgaaggacggtcagctgtggctctgtgctccgcaggccaagcagatc
tggaagtgtctggcggagaacgccgtcttcctgtgcgaccgcgaggcctgctttaagtgg
tactccaagctcatgggtgacgagccggatctggacccggatatcaacaaggacttcttc
gagaacaacgtgctgcagctggaccccacgctgctgacggagaacggcatgaagtgcttc
gagcgcttcttcaaagccgtcaactgcagagagggcaaactggtggccaaacgccgggcg
tacatgatggacgacctggagctgatcgggctggactacctctggagggttgtgattcaa
ggcagtgatgatatcgccacacgggcaatagacctgctgaaagaaatatacaccaacctc
ggaccaaaactgcaagtgaaccaggtagagatccatgaggacttcatccagtcgtgtttc
gaccggctcaaggcctcgtacgacacgctgtgtgtgctggacggagacaaggacagcatt
aactgtgccagacaggaagccatacgcatggtgcgagtcctcacggtgctcaaggagtac
atcaacgagtgtgacagcgactaccacgaggagaggaccatcctgcccatgtccagggcc
ttccgtgggaagcacatctcgctggtggtcaggtttcccaatcagggccgtcaggtggac
gacttggacatctggtcccacaccaatgacaccatcggctccgtccgccgctgcatcctc
aatcgcatcaaagccaacagcacacacaccaaagtggagctgttcattggaggagagatt
gtggaccctgctgacgaccggcggctgattggacagctgaacctcaaagataaagctctc
atcacggcgaagctcacccaggtcagctccaacatgccctccagccccgacagctcgtcc
gactcgtccaccggctcgcccggaaaccacggcaaccactacagcgacgggccgaacccc
gaggtggaaagctgcttgccgggagtgatcatgtcgctgcatctgcgctatatctccttc
ctgtggcagatcgctgatctgggctgcaccttgaacatgccgttactgcgagacggagcg
cgagtgctcatgaagctcatgcctccagacaccactacagtggagaacctccgagcgata
tgtctggatcacgccaagctgggagagaacagtctgagtcccactctggattcacgcttc
tttggtccttccccttcacaagtgctctacctcactgaggtggtgtatgcgctgctgatg
ccagccactggaactctgggagatgacgcctgtgacttccagttcaacttcttgaagagt
ggcggtctgcctctcgtcctgggcatgctcactaggaacaacttcctgcccaatgcggac
atggagacgaggcgcggcgcctacctgaacgccctcaagatcgccaaactcatgctcacc
gccatcgggttcgggcacgtgaaggccgtcgcggaggcgtgtcagcctgtggtggaggga
accaacccagcctcgccgataaaccaggcgacgcacgatcaggctctggtgctacagaac
gctctccagagcattcccaatcccgcctccgaatgcatgctgcgcaacgtggccatccga
ctggcccagcagatctctgatgagaacttcttccaggcctcaaagtacatcccagatatc
tgcgtgatccgagccgtgcagaagatcgtctgggcttcgggatgtggaatggtgcatctg
gtcttcagctcgaatgaagagattagcaagatctacgaaaagactaacgccggtaacgag
ccggatccggaagacgagcaggtgtgctgtgaggcgctggaggtcatgaccttgtgtttc
gctctgctcccgacggccctcgacacactcagcaaggagaaggcctggcagaccttcatc
atcgacctgctgcttcactgccagagcaaagccgtgcgtcagatggcacaggagcagttc
ttcctcatggccaccaggtgttgtatgggacacagaccgctgctgttcttcatcacgctc
ctcttcactgttctgggaagtacggctaaagaaagagcgaagcacgctggcgattacttc
acgctcttacgccacttgctcaactacgcgtacaacagcaacataaacctgcccaacgca
gaggtgctgctcaacaacgagatcgactggctcaagagaatccgagacgaggtgaagagg
accagtgagacgggtgtggaagagaccattctcgagggtcacctgggcgtcaccaaagag
ctgctggcctttcagacgcctgagaagaaattctatatcggatgtgagaaaggcggcgct
aatctaataaaggagctgattgacgatttcatcttcccggcgtctaacgtgtacctgcag
tacgtgaagagcggcgagttcccggcggagcaggccattccggtgtgcagcagtcctgcg
tccataaacgccggctttgagctgctggtggcgctcgctgtcggctgtgtgcggaacctc
aaacagatcgtcgacacgctcacagacatgtactatctaggttgcgaggcgctcacggag
tgggagtatcttcctccggtggggccacggccgaccaaaggcttcgtgggtctgaagaac
gcgggagccacgtgctacatgaactccgtgatccagcagctgtacatgatcccgcccatc
cgaaacggcatcctggccatcgaaggcactggcagtgacatcgacgacgacatgtccgga
gatgaaaagcaggacaacgagagtaatgtggaccccagggatgatgtgttcagttatcat
caccagtttgatgacaagccctctctcaataaggccgaggaccgcaaggagtacaacatc
ggagtgctgcggcatctgcaggtcatcttcggtcacctggcggcgtcccgtctgcagtac
tatgtgcccaggggattctggaagcagttcaggttatggggggaaccggtgaatctgaga
gagcagcacgacgcactggagttcttcaattccctggtggacagtctggatgaggcgctg
aaagccctcggccatcccaccatgctcagcaggatcttgggtggctcgttcgcagaccag
aagatctgtcagggttgccctcacaggtatgagtgtgaggagtccttcacaacgttgaat
gttgacatcaggaaccaccaaaacctcctcgactctttagaacagtacgtcaaaggggat
cttctggaaggagccaacgcttaccactgtgagaagtgtaacaaaaaggtggacacagtg
aaacgtctcctcataaagaaactcccgcccgtgttggccatccagctgaagcgcttcgat
tacgattgggagcgcgagtgtgcgattaagttcaacgattacttcgagtttcctcgtgag
ctggacatggagccctacacggtggcgggcgtggcgaagctggagggtgacgaggtgccg
ctggagagccaggtcatccctgaggacttgccggcgctgaccgaacccaacggcagctcc
cgctacaggctcgtgggcgtgctggtgcactcgggtcaggccagcggcgggcactactac
tcttacatcgtccagcgtcacggaaatggcggcgacggacaaaaggaccgctggtataag
ttcgatgacggtgacgtaacggagtgcaagatggacgacgatgaggagatgaagaaccag
tgctttggtggagagtacatgggcgaggtgtttgaccacatgatgaagcgcatgtcatac
aggcggcagaagcgctggtggaacgcctacattctgttctacgagcgcatggacgcagca
gggggcgacagcgagctgttgaagtacatttccgaactgacgctcngcgcccggccgaac
cagcccaaaatgcccttggccatcgaggccagcgttcgcaagcagaacgtccagttcatg
cacagccgcatgcagtacagcctcgagtacttccagttcatcaagaaactgctgacctgc
aacagcgtctacctgaaccctcctccaggtcaagatcaccttctaccagaagctgaagag
atagcgatgatcagcatacagctcgccgctagatttctgttcagcaccggattccacaca
aagaaagtcgtgcgcggccctgcgagtgactggtatgacgccttgtgcatcctgttgcgt
tacagcaagaatgtccgcagctggttcgcacacaacgtgctgtttgccttccccacgcgg
ttctctgagtacctgctggagtgtccgagcgcggaggtccgcggagcttttgccaagctc
atagttttcatcgcacatttttccctgcaggacggaccgtgtcctgctcccgtcacgtcg
cccggcgcgtccacacaggcctgtgacagtgtgaccctgagtgaccacctgttgagggcg
gtgctgaacttactgaggagggaagtgtccgaacacggccgccaccttcagcagtacttc
aacctcttcgtcatgtacgccaacctgggtctggcagagaagacacagctgctgaagtta
agcgtgccgtccaccttcatgttggtggcgctggacgagggtcccggcccccccattaag
tatcagtacgcggagctcggcaaactctacacggtggtgtcgcagctgctgcgctgctgt
gatgtgtcgtcgcgcatgcagtcctccattaacggaaacccaccgctggccaacccgtac
ggcgaccccaacctcgcggctcccatcatgcccctgcagcagctggtggccgaaatcctg
tttgtgcgcacgagttacgtgaagaagatcatcgaggactgcagcaactctgaggagacg
gtgaaactgctgcgcttctgctgctgggagaacccacagttctcctccacggtcctcagc
gagctgctctggcaggtggcgtattcctacacctatgagttgaggccttacctggatctg
ctgctccagatccttctgatcgaggactcgtggcagacgcacaggatccacaatgttttg
aagggcattcctgatgaccgagacgggctctttgacaccatccaacgctccaagaaccat
tatcagaaacgggcctatcagtgcattaaatgcatggtggcgctcttcaccaactgctct
gtggcttatcagatcctacagagcaacggggacctgaagaggaagtggacgtgggcagtg
gaatggctgggcgacgagctggagcgcaggccgtacactggaaaccctcagtacagctac
aacaactggtccccgcccgtacagagcaacgagacgtccaacggatacttcctggagcgc
tctcacagcgcccgcatgacactggccaaggcctgtgagctctgtcctgaagaggtgagc
gctcagtcagtcaaacctcaccaaaacacagttctggagccagacgatcaggaagcgccc
gatgagcacgactcgtcgccccctgaagacacggccctctatcctcattctccagggacg
cagtatcagcagccgaataaccatcctcacgggcagccctacaccggcccggccgcccag
cacatgaataacccccagcgaccccctcagaggcctcaagagagctgggagggaaccgac
gaggtccctcccgtccagacgaaagagtag
DBGET
integrated database retrieval system
