Megalobrama amblycephala (Wuchang bream): 125273489
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Entry
125273489 CDS
T08212
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125273489 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125273489 (stau1)
Protein phosphatases and associated proteins [BR:
mamb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125273489 (stau1)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125273489 (stau1)
mRNA cycle factors
Stress granule specific factors
125273489 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
125273489
NCBI-ProteinID:
XP_048054875
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All DBs
Position
LG8:6095673..6112297
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AA seq
702 aa
AA seq
DB search
MSQLQFQAPANPAPSAAPLQLVPPQPGFSIPCATAPLPSESASHPLRNSALPSASATPFC
NPTVSNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFSVRLTLGDQHWDAE
GTSIKKAQHSAASCALAETTLPKPSHRSPRHPGKNPGGIYKGSEYNITHTVELNALCMKL
GKKPIYKPIDAYHGMRPAFNYNIRAPGPYTRSMQHYYYPFPPVGPVLYHMELSIGGQQFH
GKGRTRQAAKHDAAAKAIKYLQKEPIMQQLAEMKEEPVQENLNKSEISQVFEIALKRNLP
VNFEVLKETGPPHMKSFAVRVTVGEFSGEGEGKSKKIAKKLAAIAVLEELRRLPQLPVAD
KIPLRIKKKSKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYTLVTERGLPRRREF
VMQVSVAGQNAEGMGPSKKVAKRNAAEKMLELLGFKVPQPQPPKPALKTDEKAPAKKPGD
GRKVTFFEPGSVEKAGLAVNKEEDFRLPFLSHQQLPAGILPMVPEVAQAVGANQGPHAKD
YSRTAAPNPAKATVTAMIANELLYAGTSPTAEGILKTKNNLAHRPHGPLTRPSEQLSYLA
TVQGLQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELD
QQSNERTTNGPMSGCNKQDLEGDALLKPVNSSTIGKTLDGTV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcttcagttccaggcgcctgccaaccctgcacccagtgccgcccctttacag
ctggtcccgccccaacccgggttcagcattccctgtgccactgctcccttaccctcagag
agtgccagtcacccattacgaaactccgccctgccttctgcctctgccacacccttctgc
aaccccacagtatctaacatggcaaaccctaaagagaagaccccaatgtgtctggttaat
gagttagcccgttacaataagatccaacctgaatacaagctactcagtgaacaaggacca
gcccactccaagattttctcagtgcggttaactctgggggatcagcactgggatgcagag
gggaccagtatcaaaaaagcccagcactcagcagcatcatgtgcccttgccgaaactact
ctccccaaacccagtcacagaagtccccgccaccctggcaagaacccaggtggaatctac
aagggctcagagtataacataacccacactgtggagcttaatgcactttgtatgaagttg
ggcaagaagcccatctataagcctatagatgcctaccatgggatgagaccagcattcaac
tacaacatcagagcaccaggcccttacacacgctccatgcaacattattactacccattt
cctcctgtggggccagtactgtatcacatggagctgtctatcggtggacaacagttccac
ggcaagggccgcacgcgtcaagcagccaaacacgatgctgcggccaaagctatcaaatac
ctgcagaaagagccaataatgcagcaactggctgagatgaaagaagagccagtacaagaa
aaccttaacaaatccgagatcagccaagtgttcgagattgcactgaagcgcaacttgcct
gtgaatttcgaggtgctaaaagagactgggcctcctcacatgaagagcttcgcagtgagg
gtaacagtgggcgagttttcaggggagggggagggcaaaagcaagaagattgccaagaag
ctagctgccatcgctgtgctggaggagctccgcagactgcctcagctacctgtcgcagac
aagataccactacgcattaaaaagaaaagcaagtccattattaagctgcagaccagtcca
gagtatggtcagggcatgaaccctatcagcagactggctcaaatccagcaggctaagaaa
gaaaaagagcctgagtacaccttagtgacggagagaggtctgcctcgacgcagggagttt
gttatgcaggtgtcagttgcgggtcagaatgcagagggaatgggtcctagtaaaaaagtg
gccaagcgaaatgcagccgagaagatgctggagcttctgggcttcaaagtgcctcagcca
caaccacccaaaccggcattgaaaacggatgagaaagcacctgctaagaaacctggagat
ggacgaaaagtgaccttctttgaaccgggatctgtggagaaggccggtcttgcagtcaat
aaggaggaggatttccgacttccctttctcagccatcagcagcttcctgctggcatttta
cccatggtgcctgaggtggcacaggcggtgggtgccaaccagggaccccatgcaaaagac
tacagtcgcacagctgcccccaacccagccaaggccacagtaacggccatgattgccaat
gagctgctgtacgctggcacgtccccgaccgcggagggtatactaaagaccaaaaacaac
ttggcacacagaccccacggaccccttaccagaccatccgaacagctcagctacctggcc
actgtacagggattacaggttgaatataaagactttcccaaaaataacaagaatgagttt
gtgtctctgatcaactgttcctctcagccccctctcatcagccatggcatcggcaaggat
gtggagtcctgccatgacatggctgctttgaacatcctgaagctcctgtcagaacttgac
cagcagtccaacgagcgtacaactaatggaccaatgtcagggtgcaacaaacaggaccta
gagggcgatgcattattaaaaccggttaactcaagcaccatcggaaagactctggatggc
acagtgtag
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