Megalobrama amblycephala (Wuchang bream): 125273684
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Entry
125273684 CDS
T08212
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125273684 (chd1l)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125273684 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
PAP1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
125273684
NCBI-ProteinID:
XP_048055223
LinkDB
All DBs
Position
LG8:complement(11789193..11808901)
Genome browser
AA seq
1027 aa
AA seq
DB search
MSTFLQAVRNNIPEKEKSEITESDLKKWGLGAIHLRSYQVDGVRWLSQCMKNQQGCILGD
EMGLGKTCQTISLLAYARGCLKMNGPFLVLCPLSVLENWRQELERFCPRLSVLCYSGDKE
RRAELQEELKNGKNFHVLLTTYEMCLKDARFLKSWKWKILVVDEAHRLKNQESLLHQTLK
EFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSLFLPEDVEDFVSAYADVQTEPALADELH
RVLQPFLLRRVKAEVAAELPKKTELVVYHGLSALQKRYYKAILMRDLDAFRTDQSTKTRL
LNVLMQLRKCVDHPYLFDGVEPEPFEMGEHLMEASGKLSLLDTMLTYLQEGGHRVLLFSQ
MTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTKDVFIFLLSTKAGGVGMNLT
AADTVIFVDSDFNPQNDLQAAARVHRIGQTRPVKVIRLLGRDTVEEIIYSRAVSKLRLTD
TVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLSSEESSIQDVDLRLILGQSRDGRWL
TDEEHVKLNESDKEEDEDMEGQNHMYYFEGKDYSKDPSAEDEKTFELLFEKQLADLEDAG
KEGRALRNKAGVSLTGPLIAQGRKKRPLTESELEQRRQKRQEAAAKRAKLQEERKRQQEE
LNYKKKMAWWDSCGYRSLCLPNVDSEGEEMEPDEDDDVSWSSNDSDKTAIRYVLGDVTHP
QADREDAIIVHCVDDSGHWGRGGLFTALELRSDEPRKQYELAGDMNDLELGNVLLFPIDD
KQSRLSGRDYLALIVAQQRDKANKLSGIRLTALDEGLKKIYRDAKQKKASVHLPRIGHST
KGFNWYGTERLIHKHLATKGISTSIYYYRRGTSHSSTVYSSTTYTATPSTSDSAASAAGS
PHSSSPLGNNKDLTKSPEISTTSPESQGTPGLADFMRGVHVYFYNMAATEKKKLTRYLIT
YDGDDEDLMSSHVTHIVGEVESPVHAKELQDLLHQYPQALLVKKKWLESCFANQRKVSVS
KYVISLS
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttcttcaagcagtcagaaacaacataccagaaaaggagaaatcggaaata
acggagagtgacctgaaaaaatggggactaggtgctattcatctgaggtcttatcaggtg
gatggagtgaggtggctgtcacagtgtatgaagaaccagcagggctgcatccttggagat
gaaatgggtctgggcaagacttgtcagaccatctctttgctagcatatgctcgaggatgc
ctgaagatgaatggaccattccttgtgctttgtcccttatcagttttggagaactggaga
caagagttggaacgcttctgtcccaggctttctgtgctctgttactctggagataaagag
agaagggcagagctccaagaagagctcaagaatggcaaaaacttccatgttcttctcacc
acctatgagatgtgcctcaaggatgccagattcctgaaaagctggaaatggaagatttta
gttgtcgacgaggctcaccggctaaagaaccaggaatctttgctgcatcaaaccctcaaa
gagtttacagtgggttttcgagtgctgttgacaggcactcccattcagaataacttgcaa
gaagtctattccctcctcaccttcattcagcccagtctctttctccctgaagacgttgaa
gactttgttagtgcatatgcagacgtacagactgaacctgcactcgccgatgagcttcat
cgagtgctccagccttttttgctacgcagagttaaagcagaggtggcagccgaactgccc
aagaagacagaacttgtggtttatcatgggctgtctgctcttcagaagagatactataaa
gccattctgatgagagaccttgatgcctttaggacagatcaaagcactaaaacccgactt
ctgaacgttttaatgcagctcaggaaatgtgtggaccatccctacttgtttgatggtgtg
gaaccagaaccgtttgagatgggggagcatttaatggaggccagtggaaagctctctctg
ttggacacaatgctgacgtatcttcaggaggggggccatcgtgttcttctattctctcaa
atgaccaggatgctggatattctgcaagattacttggagtacagaggttacagttatgag
cgtctggatggttcagtccggggagaggaacgtaacctagctattaaaaatttcagcacc
aaagatgtttttatattcctcctcagcaccaaagctggaggggttggaatgaacctaaca
gcagcagatactgtgatatttgtggacagtgatttcaacccacagaatgacctacaagca
gcagccagagtccacaggattggccaaacaaggcctgttaaagtgatccggctcctcggt
agagatactgtagaagagatcatctattcccgcgctgtgtctaaactccgtctcacagac
acggtgattgaggagggacgtttttctttgctggaccaggctcagtccgcagcttctggc
cttcagttgagtgagatcctgaagtttggtgtggataaactgctgtcatcagaagagagc
tctattcaagacgtggacctcaggctgatcctagggcagtctcgagatgggcgatggcta
acggatgaagagcatgtcaagcttaatgagagtgataaagaggaagatgaggacatggag
ggtcaaaaccacatgtattacttcgaggggaaggactactctaaagaccccagtgccgag
gatgagaagacctttgaactgttatttgagaagcagttagctgatctagaggatgctggg
aaggagggccgtgcacttaggaacaaagctggggtgtccctgactggacccttaatagcc
caggggaggaagaagaggcctcttacagagtcagagttagaacagagacgtcagaagaga
caagaagctgctgctaagagggcaaagctacaagaggaaaggaagaggcaacaggaagaa
ctaaattacaagaagaagatggcatggtgggattcgtgcggctacagatcactgtgcttg
ccaaatgtcgacagcgagggtgaggaaatggagcccgatgaagatgatgatgtcagctgg
agctccaatgattcagataaaacagccattcgctatgtgttgggtgatgtaactcaccct
caggctgatcgagaagatgccatcattgtgcactgtgttgatgactctggacactggggc
cgaggaggattgttcacggcactggagctcagatcagatgagccgaggaagcagtatgag
ttggctggtgacatgaatgacttagaacttgggaatgttctgctttttcctattgatgat
aaacagtcgaggctcagtggaagagactatctggcactcatagttgcccagcagagggat
aaagccaacaagttgtcaggcattcggctcactgccttggatgagggcctcaaaaagatc
tacagagatgccaaacaaaagaaggcaagtgtccatctgcctcggattggtcactcaact
aaaggcttcaactggtacggtacagagagactcatccacaagcacctggccaccaaaggc
atctccacatctatctattattatagacgaggcacttcacactcttctacagtttattct
tccaccacttacacagctactccatcaacctcagactctgcagcatcagcagcagggtcc
ccacactcctccagtccccttggtaacaacaaagaccttacaaagtcaccagaaatctcc
actacatcacctgaaagtcagggcacaccagggttggctgacttcatgagaggtgttcat
gtctacttctacaacatggctgctacagaaaagaagaagctcacccgctaccttatcaca
tatgatggtgatgatgaggatctcatgagctcacacgtcactcatatcgtaggagaggta
gaaagtcctgtccatgcaaaggaactgcaagatctattgcatcagtaccctcaggcacta
cttgtaaagaaaaagtggctggagtcctgctttgctaaccaaaggaaagtcagtgtgtct
aaatatgtaattagtttaagttaa
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