Megalobrama amblycephala (Wuchang bream): 125274056
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Entry
125274056 CDS
T08212
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125274056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125274056
03036 Chromosome and associated proteins [BR:
mamb03036
]
125274056
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125274056
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
125274056
Chromatin remodeling factors
BAF complex
125274056
PBAF complex
125274056
GBAF(ncBAF) complex
125274056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
125274056
NCBI-ProteinID:
XP_048056056
LinkDB
All DBs
Position
LG8:complement(22794656..22824725)
Genome browser
AA seq
1625 aa
AA seq
DB search
MSTPEPPLGGTPCPGPSPGPGPSPGAVLGSGLSPGSSHSMMGPSPGPATSTGHSFPQQTS
AGYSQESLHQMHKPVEESLSEDARFSQMKVVPMRAGHSGMTRPGSPMDQHSQGYPSPLGA
SEHVSSPVSASGPPSGPLLSTSGSSSASLEGVDGQTLPQQNRPGSQSATSVSGSSASGSS
ATPTPFNQSQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMPQGPSLSSLPPGG
GGSAGFSRGHGMVGPNMPPPGPSGVPAGVQGQNHNGPPKPWPEGPMVNAATPSNAPQKLM
PPQPTGRPSPAPPSVPPAASPVMPPQTQSPGHLAHPSQPTTMVPLHQKQNRITPVQKPCG
LDPVEILQEREYRLEARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETSLDSKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSITAKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKKKKKKKKKLENAEGQTGA
LGPDGEPLDETSQMSDLPVKVIHVDSGKILTGVDAPKAGQLDTWLEMNPGYEVAPRSDSE
DSGSEEDEEEEEEPPQLLPSQTPGEEKKKIPDPDSEDVSEVDARHIIEHAKQDVDDEYGS
AAFARGLQSYYAVAHAVTERVDKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEM
GLGKTIQTIALITYLMEYKRLNGPYLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAAR
RAFVPQLRSGKFNVLLTTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHY
LAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEET
ILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDG
SEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGADLYRASGK
FEVLDRILPKLRASNHKVLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKT
FNDPASQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRV
LRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVRS
ITLPAYSRRQTEEDEVPDDETVNQMIARSEDEFDQFMRMDLDRRREEARNPKRKPRLMEE
DELPTWIMKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQWLKAIEDGTLEEI
EEEVRHKKTARKRRRDRDPDAIPSTSGARGGRDRDDDSKRQKKRGRPPSEKLSPNPPSLT
KKMKKIVDAVIKYKENNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHRYR
SLNDLERDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEREEESDGEESEEDEE
DEGSDSETRSVKVKIKLSRKDRSAERGRGRRRTARTRAKPVVSDDDTDEEQEEDRSNSAS
EEEQG
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccagagcccccgttaggagggacgccctgtccggggccttcgcctggtccg
ggcccatctccaggggccgtgctgggttcaggactgtcccctggatcctctcacagcatg
atgggccccagtcctggaccggccacttccacaggacactcctttcctcagcaaacatct
gcgggatacagccaggagagtttgcaccagatgcacaagcctgtggaggagagcctttca
gaagatgctcgtttcagtcagatgaaagtcgttccaatgagggccggtcacagcgggatg
acgcgtccaggaagcccgatggaccagcactctcaaggatacccgtcaccgctgggcgct
tcagagcacgtgtccagtcctgtgtctgccagcgggcctccatccggtcccctcctgtcc
acctccggctctagttctgcctcgttggagggcgtggatggccaaacgctgccgcagcaa
aaccgcccgggaagccaaagcgccacctctgtctccggcagcagtgcctcaggctcctct
gccaccccaacacccttcaaccagagccagctgcaccagctgcgcgctcagatcatggcc
tataagatgttggcgcgtgggcagcctctaccagatcacctgcagatggcagtgcagggt
aagcggcccatgccaggcatgccacagggaccatccttgtccagtttgccaccgggtggt
ggaggaagtgctggtttcagccgaggacatgggatggtgggacccaacatgcctcctcct
ggaccttctggagtaccggctggcgttcagggtcagaaccacaatggaccccccaagcca
tggcctgaaggtcctatggtcaatgcagcgaccccctccaacgctcctcagaagctgatg
ccgccgcagcccaccggacgtccctcacctgctccaccgtcggtgccaccggctgcctca
ccagttatgccgccacaaacccaatcaccaggacacctggcccatccatctcagcccacc
accatggtgccgctgcaccagaagcagaaccgcataacgccagttcagaagccttgcggt
ctggaccctgttgagattctgcaggagagagagtacaggcttgaagctcgtatcgcacac
cgtattcaggagctggagaatcttccggggtctctggctggagatctgcgcaccaaagca
actattgagctcaaagctctcagactgctcaacttccagagacagctgcgtcaggaggtg
gtggtttgcatgagacgagacacggccttagaaacatcactggactccaaggcctataag
cgcagcaagagacagtcgttacgtgaggcgcgaatcacagagaaactagagaaacagcag
aagattgaacaggaacgcaaacgcagacagaaacaccaggagtatctcaacagcatccta
cagcatgccaaggacttcaaggaatatcatcgctccattactgcaaagatccagaaactg
accaaagccgtggccacgtaccatgccaacactgagcgcgagcagaagaaggagaatgag
cgcatcgagaaagagcgaatgagacgcctgatggctgaggatgaggagggttacaggaag
ctcattgaccaaaagaaggacaagcgtctggcgtatctgctccagcagacggacgagtac
gtggccaatctgacagagcttgtccgtgctcataaagctgtccaggccctgaaagaaaag
aagaagaagaagaagaagaagaaaaagaagctggagaatgcggagggacagacgggggct
ctgggaccagatggagagcccctagatgagacgagtcagatgagtgatctcccagtgaag
gtgatccacgtggacagcgggaaaattctgaccggagtggatgctcctaaagctggacag
ctggacacatggttggagatgaaccctggttacgaggtcgcgccacgctctgacagcgag
gattctgggtctgaggaggacgaggaagaggaagaggaacctcctcagcttctgccctct
caaactcctggggaggagaagaagaagattcccgacccggacagtgaggacgtgtcagag
gtggacgcgcgtcacatcatagaacatgctaaacaggacgtggatgatgagtacggtagc
gctgcgttcgcgcgtgggttgcagtcatattacgctgtggctcatgcagttaccgagcgg
gtagacaaacagtcgtctctgctgatcaacggtcaactcaagcaataccagatcaagggt
ttggagtggctggtgtctctgtataacaataatctgaacgggatcttggcggatgagatg
ggtttgggcaaaaccatccaaaccattgcgctcatcacatacctcatggagtacaagcgt
ctaaacggaccctacctcatcatcgtgccactctcaactctgtctaactgggtctatgag
tttgataaatgggctccttctgttgtcaaagtctcatacaaaggatctcctgctgctaga
agagccttcgtaccgcagctgcgtagcggcaagttcaacgtgctgctcactacttacgaa
tacatcatcaaagacaagcaggtgctggccaagattcgctggaagtacatgatagtggac
gaaggtcatcggatgaagaaccatcactgtaagctgacgcaggtgttgaacacgcattat
ctggcaccgcggcgggtgctgctgacggggacgccgctgcagaacaagcttccagagctc
tgggcgctgctcaacttcctgctgcccaccatcttcaagagctgcagcacatttgagcag
tggttcaatgctcccttcgcgatgaccggagagaaggtggacttgaatgaggaggagacc
atcctgatcattcgccgcctgcataaggtgctccgccccttcctgttgcgcaggctgaag
aaggaagtcgaggcgcagctgcctgagaaggtggaatatgtgataaagtgtgacatgtcg
gcccttcagagggttctgtaccgacacatgcaggccaaaggagtgctgctaaccgacggc
tccgagaaggacaagaagggtaaaggcggcactaagactttaatgaacaccattatgcaa
ctgaggaagatctgtaatcacccctacatgttccagcaaatcgaggagtcattttctgag
catctgggtttctcgggcggtatagttcaaggggctgacctgtaccgagcctcaggaaaa
tttgaggtgctggatcgtattttgcccaaattacgggcgagcaatcacaaagtgctgctc
ttctgtcaaatgacctcactgatgaccataatggaggattattttgcttaccgcaacttc
aaatatcttcgtttggatggcacaaccaaagcagaggatcgtgggatgctgctgaagacc
ttcaatgatccggcctctcagtactttatattcctgttgagcaccagggcaggtggactg
ggcctcaatctacagagcgccgataccgtcatcatatttgacagcgactggaaccctcat
caggacctccaggcgcaggatcgagcccatcgaatcggacagcagaacgaggtgcgggtt
ttgcgtctctgtaccgtgaacagtgtagaagagaagatcctggcagctgctaaatacaag
ctgaatgtcgaccagaaggtgatccaggccggcatgttcgaccagaagtcgtcgagtcat
gagcgccgagcgtttctgcaggccattctggaacacgaggagcaggacgaggtcaggagt
atcactctccctgcgtatagtaggcgacaaacagaagaagacgaggtgccggacgatgag
accgtaaatcagatgatcgccaggagtgaagacgagtttgaccagttcatgcgtatggat
ttggatcgacgccgcgaggaagctcgcaatccaaagcgaaaaccccgtctcatggaggag
gacgagctgcccacgtggatcatgaaagatgatgcagaggtggaaagactcacctgtgag
gaagaagaagagaagatgttcggccgtggctcccggcagagaaaagaggtcgattacagc
gattcgctcacagagaaacagtggctaaaggctattgaggacgggactctggaggagatc
gaggaggaggtgcgacacaagaaaacggctcggaagaggaggcgcgatcgggatccggat
gccattccttccacttcaggtgctcgtggagggagagacagagatgacgacagcaaaaga
cagaaaaaacgaggtcgtccgccatccgagaagctttcgccgaaccctccgtcactcacc
aagaagatgaagaagattgtggatgctgttattaaatacaaggagaataacggtcgtcag
ttgagtgaggtgttcatccagctgccgtcgcggaaggagttgcccgagtactacgagctg
atccgcaaacctgtggacttcaggaagatcaaggagcgcatccggagtcatcggtaccgc
agccttaatgatctggagagagacgtgatgctgctgtgtcaaaacgcacaaaccttcaac
ctcgagggctcactgatctacgaggactctatcgtgctgcagtcggtgttcaccagcctg
cgccagaagattgaaagagaggaagagagtgacggagaggagagtgaggaagatgaagag
gatgaaggctctgattcagagactcggtccgtgaaggtgaagattaaactgagccgcaag
gacagaagcgcagagcgtggcagaggacgcaggagaaccgcgagaacccgtgcaaaaccc
gtcgttagtgacgatgacactgatgaggagcaggaggaggatcgatccaacagcgccagc
gaggaggagcagggatga
DBGET
integrated database retrieval system
