Megalobrama amblycephala (Wuchang bream): 125274131
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Entry
125274131 CDS
T08212
Symbol
ccdc88aa
Name
(RefSeq) girdin isoform X1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
125274131
NCBI-ProteinID:
XP_048056213
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Position
LG8:25654485..25694632
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AA seq
1524 aa
AA seq
DB search
MEGDIPVILEQFMSSSLVTWVKTFGQLGDKEGNMLSEYTELVDGIFLNKVMNQINPKGTV
QVLNKVYNDVGQRAQNLSVLIYHIKSYYQETLQQLIMMSPPNVLLLGKNPLCEEGLEEIR
KLLLLLLGCAVQCERKEEYIEKIQCLDFDTKATIAAHIQEVTHCQENVFDLHWLEMEDVC
PDEWENLCRSMNINLKMLVDQRDRQFEVIVELMQGKETMKSVVFGDDSSLTESANSQLPL
SQQHLALELTDAKAKTKRLRQELEEKSEQLLDCRQDLDSVEAELKRLQQENMQLLTDARA
ARMYRDELDAMKERAIRADKLESEVARYKDKLHNMNFYKTKLEELKEDNQVLMESKAMLE
EQLQSIKLRSDKLHHLEKHNLLLEAKLHDMEEERTVDRRQIEELLEKNIILELSQKSSME
ESQRLGWELELAKNPQQNSGTELKSLGQEVTEKTWSRLLKLEKENQRLLKSLEELQGTSH
PLDEFISKSKNIEENGRTNNQSLDTEHLHASLENTNGNLHCLEVELHEFNLNQNQGQVDI
ENKGLVHENGHLEQDRSCLEKENRRLQQQVKIQEASLNSSSLKLAVLEKENRTLVKKTTY
LSEACAKNKELEKENQELIQQAGVDKRTLMTLREELLDQRLKLQQKESDVEKLNYELERM
KLNQEKRMGDHEAVDQGKCKQLESELESSLMKSLKIKKERMAALEARLQESAKINQQLRQ
DLKTVKQNYEALLQREEEEKAGQCSPPERAWHRDSQEATWALLKVKDRLIEVERNNATLQ
AEKQALQTQLQTLQALSDGLQAQIIALQHQTASLQENNTALQTHNAQLQVEKSTLSSQNS
SLMAHNERLQRERQSSEAEREGALREREDLRTVNELLLRDHERLSVLHERQSAELEVLSH
RYSTMENSHRTLEIEHRSLEDRYNTLLQQRAQLEGLERALREEQQKMQNEICTNRNTTTE
CQRLRDEKDWLNQIYQKLLAENEGLQVEHKSIKSQLNSSKLEQTQLESELSKLKEQNQQL
EITTIKLTNQCELLTQLKGNLEEENRHLLDQIQSLMLQNRTLLDQTMESKDLFHVEQRQY
IDKLNELKRQKEKLEEKIMDQYKFYDPSPPRRRGNWITLKMRKLMKTRARDQEHVHSPTL
RSESCEGLDDLRCHDNGSFVGSQGSEESAPNSLNGDTVSPKRSSICALKMFHVKRNKPKD
KDKVNSIFRRSLSMNDLLQSQGCLDEDSGQQEDQLEEQIMQHTIAISKKHSTSSSSFPPY
SSIDNHTTICNQGNDFQGDTIPPSLAIGAEGQNHAGLNGKSSRAPSASSGEFSVSLENEA
WSSDGSPLPDPFPSNRHQFSNSPSPARPNHEELRQGYCSSGSAVRRSSSGRSTGDRLAQK
LDKASIGLYKTQSVQSTESDPKPALETQGKSSSVSGCLNCFATPMRSPKTGQALSTLPRA
SCVISTSEGNSRRASVHSTMSVKSVGSASNKNGADPHMTHPDHSDEVLKGSPVLEEDNRK
PEHLFDSAFTIDSVFTNTIFSESS
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgacattccagtcatattagagcagttcatgagcagctctcttgtcacttgg
gttaagacatttggtcaactaggtgacaaagaggggaacatgctctctgaatacactgaa
ttagtggatggaatattcttgaacaaggtcatgaatcaaataaatcccaaagggactgtt
caagttttaaacaaagtgtacaatgatgtcggccagagagctcaaaacctgtctgttctc
atttaccacatcaaatcatactaccaggagactctgcaacagttgattatgatgtctcct
cccaatgtgctgctgctgggcaagaacccgctctgtgaggaaggtctagaagagatcagg
aagttgctgctgctgttgcttggctgtgctgtgcagtgcgaaagaaaagaggagtatatc
gagaagatacaatgtcttgattttgacacaaaagcaacaatcgcagctcatatccaagag
gtgactcattgtcaggagaatgtgtttgatctgcattggttggagatggaggatgtatgt
ccagatgaatgggaaaatctctgcagaagtatgaacattaatctcaaaatgttagtggac
cagcgagaccggcaatttgaggtcatcgtggagctgatgcaggggaaagagacgatgaag
tctgtagtgtttggtgatgactcctccctcacagagtccgctaacagccagctcccttta
tcccagcagcatctggcactagagctgacggatgctaaagccaagaccaaacgcctcaga
caggagctagaggagaaaagtgaacagctcttagactgcaggcaggacctggacagtgtg
gaggcggagcttaaaagactccagcaagagaatatgcagctgttaacagatgcacgagca
gccaggatgtaccgtgatgagctagatgcgatgaaagagagagccatcagagcagacaaa
ctggaaagtgaagtggctcgctacaaagataaacttcacaacatgaacttttacaaaacc
aaactggaggagctaaaggaggataatcaggtgttgatggaaagtaaggccatgctggag
gaacagctacagagcatcaaattacgatctgacaaactgcaccatctggagaaacacaac
ctcctactagaggcaaaacttcatgacatggaagaggaaagaactgtggacaggagacaa
atagaggagctgctggaaaagaacatcatattggagctctctcagaaaagtagtatggag
gaatcacagcgcttgggctgggagctagaactcgccaagaaccctcaacagaattcagga
acagagctgaagtctttgggccaggaggtaactgaaaagacatggagcaggttgctgaaa
ctggagaaggagaaccagaggttgttgaagtccctggaagaacttcaaggaaccagtcac
ccactggatgagtttatttctaaatctaaaaatattgaggaaaatgggaggaccaacaat
cagtcccttgacacagaacatctacatgcatccttggaaaatactaacggcaatcttcat
tgtcttgaagtagagctccatgaattcaatttaaaccaaaaccaaggtcaagtagatata
gaaaacaaaggtctagtgcatgaaaatggacatctggagcaagataggagttgtctggag
aaggagaatcggagattgcagcagcaagtgaagatccaggaggcctcgttgaatagtagc
agtttgaagttggcagttctagagaaggagaaccgtaccctggttaaaaagactacctat
cttagtgaggcctgtgccaagaacaaagaactggagaaggaaaaccaggagctgattcaa
caggctggagtagacaagaggacgctgatgactttaagagaggaactgctggaccagagg
ctgaaattgcaacagaaagaatctgatgttgagaaattgaattatgagctggagaggatg
aagttaaaccaggagaaacgaatgggagatcacgaggcagtagaccagggtaagtgtaag
cagttggagtcagagctggagtcttctctaatgaaatccctgaagattaaaaaagagaga
atggctgccctggaggcccgtctgcaggaatcggccaagataaaccagcaactacgacag
gatctcaaaactgtcaaacagaactatgaggcattgcttcagagggaggaggaggaaaag
gcaggacaatgctctccaccagagagggcatggcacagagacagtcaggaggccacgtgg
gcattgcttaaggtcaaagatcgactcattgaggtggagagaaataatgcaacattacag
gctgagaaacaggcactgcaaacacaactgcagaccttgcaggcactgtcagatgggttg
caggcacaaataattgcattgcaacaccagacggcttccttgcaggagaacaacacagca
ctgcagacacacaatgcacaactgcaggtagagaagtccactttatcttcccagaattcc
tctctgatggcccataatgaacggctacagcgggaacggcagagttctgaggctgagagg
gagggtgcactacgggagagagaagatctgcgcaccgttaatgaacttcttctccgggac
cacgagagattgagcgtcctgcatgagagacagtcagcagagttggaggtgctctcccac
aggtactcaacaatggagaacagtcaccgaacactggagatagagcacagatcactggag
gacaggtacaacacgctacttcaacagcgcgctcagctggaggggttagagagagctctc
agagaagaacagcagaagatgcagaatgaaatatgcacaaacaggaacacaacaacagag
tgccaaagactcagagatgagaaagactggctgaatcagatctaccagaagctgttggca
gagaatgagggacttcaggttgagcacaagagcataaagagccagttgaactccagcaaa
ctggagcagacacagctggagtcagagctgtccaaactcaaagagcagaaccagcagctg
gagatcactactattaaactgaccaaccagtgtgagttgctgacccagctgaaggggaac
ttggaggaagagaaccgccacttgctggaccagatccagagcctgatgctgcagaaccgg
accctactagatcagactatggagagcaaggatctgttccatgtggaacagagacaatat
atagacaaactgaatgaactcaaaaggcagaaggaaaagctggaagagaaaatcatggat
cagtacaagttctatgacccatcgcctccacgcagacgaggcaactggataacgctgaag
atgaggaagttgatgaagacgagggctcgtgatcaggagcacgtccattctccaactctc
cggtccgagtcatgcgagggtctggatgacctgcgctgccatgacaacggctccttcgtg
ggttctcagggctcagaggaatctgctcccaactcccttaatggtgacaccgtgtccccc
aagcggagcagcatctgcgccctgaaaatgtttcatgttaagcgtaacaaaccaaaggat
aaagacaaagtcaactctatcttccgccgatctctgtcaatgaatgacctgctgcagtca
cagggatgtttggatgaggactccgggcagcaggaagatcagctagaagagcaaataatg
cagcataccattgccatttcaaaaaaacactccacatcttcatcatcatttccaccctac
tcttccatagacaatcatacaacaatttgtaatcaaggtaacgattttcaaggagacaca
attccaccaagtcttgcaattggcgcagaaggccaaaaccatgctggcctgaatggcaaa
tcgagtcgtgcccccagtgcgagcagtggtgagttcagcgtgagcctggagaacgaggcc
tggtccagtgatggcagcccccttccagatccattcccgtccaaccggcaccaattcagt
aactccccttcaccagcacgacccaaccacgaggagctcaggcagggttactgctcctca
gggagtgcagtacggaggtctagcagtgggagatccactggagatcgtttagcacaaaag
ctggacaaagcaagcattggactgtataaaactcagagcgtgcaaagtacagagtctgat
cctaaacctgctctcgagacacaaggaaagtcctcctctgtatcagggtgtttgaattgc
tttgctactccgatgcgaagccccaaaacaggccaggctctgtccactttaccccgcgcc
agctgtgtcatctccacgtcagagggcaacagtcgccgtgccagtgtccatagcactatg
tcagtgaagtcagtggggtcggcgtcaaataagaacggcgctgatcctcatatgactcat
cctgaccacagtgacgaggttttaaaaggaagccctgtcttggaagaggataaccgcaaa
ccggaacacctttttgattcagcattcaccatagattcagtctttacaaacacaattttc
agtgagtcaagttaa
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integrated database retrieval system
