Megalobrama amblycephala (Wuchang bream): 125274137
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Entry
125274137 CDS
T08212
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125274137
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125274137
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125274137
Protein phosphatases and associated proteins [BR:
mamb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125274137
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Protocadherins
125274137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
MAP17
AI-2E_transport
Cadherin_4
EphA2_TM
V_ATPase_I
Herpes_glycop
Motif
Other DBs
NCBI-GeneID:
125274137
NCBI-ProteinID:
XP_048056225
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All DBs
Position
LG8:complement(26558804..26882246)
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AA seq
1236 aa
AA seq
DB search
MDLRDFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMYSATTASS
SLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
LNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVT
VTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRR
LFALNSTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLR
YIISPINGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NQRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFT
VTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADA
GENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDGDTGMNAELKYTIVSCN
KEGLFRIDPVTGNITLEQKPTPADIGLHRLVVNISDLGYPKSLHTLVLVFLFVNDTVGNS
SYIHDLIRRKMETPLDRNIGESSETYQNVDNLKTIIAIVTGAMVVIVVIFITVLVRCRHA
SQFKAAQRKKQGAEWMSPNQESKQNKKKKRKKRKSPKSSLLNFVTIEENKPDDPAHEPIN
GTISLPAELEEPGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKSKGAPLHTRQGTLTRART
ELNPDYLDLRSRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGPLL
SHPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPSLSSYPSPKSPVSSFNNQKEWAKERLLNGHTLTRSWKGERGSQEQFGDRKTYGS
SEGHFGSGGHMADIPLASLKSYQPASGPDSPKEQQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagggattttttcttgttggcaacattagttgcttgtttctggttagatcca
accattgcccaagagctcatttaccctattcgagaagagctacaggagaatgttcttatt
ggaaacataccaaaggacttgaacatctcccatatgtactctgccaccacagctagcagt
agtttggtttaccgacttgtttcgaaagcaggtgacaccccgctacttagagtgatgagc
aatacaggagaaatttttaccacctccaaccgtatagacagggagaaactctgtcctggc
ccctcttttgaagacagcgagtgctcctttgaaattgaggttgtcattttacccaatgac
tatttcagattaatcaaaattaagataattgtcaaagacaccaatgacaacgcccccatg
ttcccctctcctgtgatcaacatttcaattccagaaaacacactcatcaacagccgcttt
gctattccttctgccaccgatccagataccggacccaacagtgtacacaaatacgagctg
ttgaacgggcagagtgccttcggtctggatattgtggagacaccagagggagagaaatgg
cctcagcttatcgttcaacagaatttagacagagagcagaaagatacttatgtgatgaaa
gtaaaagtggaggatggggggaacccacagaaatccagcactgccattctacaggtgact
gtcactgatgttaacgataaccggcctgtcttcaaagagagccaaattgaggtccacatc
cctgaaaactctcccgttgggacatctgtagttcagctgcaagccaccgatgcagatgtg
ggggccaatgcagaaataaaatacatgtttggtacccaggtgtctccagcgacacggaga
ctttttgctctgaactccaccactgggctcataacagttcaaaggccacttgacagagag
gagactgccattcacaaactcacagtactagccagcgatggaagctcaagtccggcgaga
gccaccataactatcaatgtgaccgatgttaacgacaacgctccaaacattgacctgaga
tacatcatcagtccaattaatggtactgtaatgctctctgaaaaagatccaataaacacc
aagattgccctcattactgtatctgacaaagacacagatgtcaacggcaaggtgatttgc
ttcattgaaaaagatgttccctttcacctcaaagcagtttatgataaccagtacttgtta
gaaacatctgcactgctcgattatgaaggaaccaaggagtacatcttcaagattgtggcc
tctgactctggaaaacctagtttgaaccagactgccctggttagagtacggctggaagat
gagaacgacaatccgcccatttttacccagcctgtcatcgagctggcagtcatggagaac
aaccagcgtgacatgttcctgacaaccatcagcgccactgatgaggatagcggacggaat
gcggagattgtctaccagcttggacccaacgcatcattctttgatcttgaccgcaaaaca
ggagtgctaaccgcatccagggtgtttgatagggaggaacaagagcggttcctctttacg
gtcaccgctagagacaatggcaccagggctctgcagagtcaagctgcagtcattgtgacc
atactggacgagaatgacaatagccctaaatttacacacaaccactttcagttctttgtg
tcagagaatctgcctaaatatagtacagttggagtaatcacagtcacagatgcagatgca
ggtgagaatgcagtggtgagactctcaatcctcaacgataatgagaacttcatcctggac
ccagattctggagtcataaagtccaacgtttcctttgaccgagagcagcaaagttcctac
acctttgacgtcagagccgtggacaatggaagccctccgtgttcatcagctgccaaagtg
accatcaatgtcattgatgtcaatgataacacccccatcgtcatctaccccccatcaaac
acctctttcaaactagtgccactctctgcgattccaggatcggttgtggccgaggtgttt
gcagtagatggcgatacaggtatgaatgcagaactcaagtacactattgttagttgcaac
aaagaaggtcttttcagaatcgaccccgtaaccggaaacatcacattagagcagaaaccc
acgcccgcagacatcggcctccacaggctagtggtcaacatcagtgatctcggctatcca
aagtctctgcacacccttgtccttgttttcctgttcgtgaacgacacagttggcaattcc
tcatacatacatgacctcatccgacggaaaatggaaacgccgctggatagaaacattggc
gagagcagtgagacatatcagaatgttgacaatctgaaaaccataattgccattgtgaca
ggcgctatggtagtgatcgtggtcatcttcataacagttctggtacgctgccgacatgcc
tcgcagttcaaagctgctcagagaaagaagcagggtgccgagtggatgtccccaaaccag
gagagcaagcaaaacaagaagaagaagcgcaaaaagaggaagtcgccaaagagctccctc
ttgaactttgtcaccatcgaggagaacaaacctgacgaccctgcccacgaacccataaat
ggaaccatcagtctcccggctgagctcgaggagcccgggattggacgctttgattggaat
gccacccctaccaccaccttcaaacccagcagcccagacttggcccggcactacaagtcc
gcttcaccccagtcggccttccacctcaaagctgacactccggtgtctgtgaaaaagcat
catgtcatacaggagctgccactggacaatacctttgttgggggctgtgatacgctttcc
aaacgttcctccaccagctctgatcacttcagtgcctcagaatgcagttcacaaggaggc
ttcaagtcaaagggggcacctttgcacaccagacagggaacacttacccgcgcccgcacc
gaactgaaccccgactatctggaccttcgctctcgagccgagctgaacccagagtactgg
acaccctgcactcctctatcgcagcggcgcgtcacgtttcacctgccggatgggtctcag
gaaagctgcagtgacagtgggctgggggaccatgagcccgtgggcagtgggccgctcctc
tcacaccctctccctctggtgcaggcgcaggatgacttctacgagcaggcctctccggac
aagaggactgaagcagacggcaactcggaccccaactctgatggacctctaggaccgaga
ggcttagtggaggccacagagatgtgcacccaagagtgtctggtgttgggccactcggac
aactgttggatgccgccgagcctgagctcgtacccttcacccaagtcccccgtttcctct
ttcaacaaccaaaaggagtgggctaaagagagactgctcaatggccacaccctgacccgc
agctggaaaggtgagcgcggaagccaggagcagttcggggacaggaagacctacgggagc
tcggaaggacattttggcagcggcggtcacatggccgacatcccgttggccagcctgaaa
tcttaccagcccgcctctggccccgacagtcctaaagaacagcagctttaa
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